RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W YMR103CQ04436 120 aa7.21□□□□□ -1.26
SHH4YLR164W HTL1Q9URQ5 78 aa7.21□□□□□ -1.26
SHH4YLR164W YBR209WP38311 105 aa7.2□□□□□ -1.26
SHH4YLR164W HAC1P41546 238 aa7.2□□□□□ -1.26
SHH4YLR164W CGR1P53188 120 aa7.2□□□□□ -1.26
SHH4YLR164W PMP3P87284 55 aa7.2□□□□□ -1.26
SHH4YLR164W CNL1Q06333 122 aa7.2□□□□□ -1.26
SHH4YLR164W YOR008C-AQ3E7B9 74 aa7.2□□□□□ -1.26
SHH4YLR164W NAT5Q08689 176 aa7.19□□□□□ -1.26
SHH4YLR164W YDL157CQ12082 118 aa7.19□□□□□ -1.26
SHH4YLR164W YDL022C-AP0C5L6 82 aa7.18□□□□□ -1.26
SHH4YLR164W YGL230CP53074 147 aa7.18□□□□□ -1.26
SHH4YLR164W CRC1Q12289 327 aa7.18□□□□□ -1.26
SHH4YLR164W APS1P35181 156 aa7.17□□□□□ -1.26
SHH4YLR164W YIL059CP40520 121 aa7.17□□□□□ -1.26
SHH4YLR164W DFM1Q12743 341 aaKnown RBP7.17□□□□□ -1.26
SHH4YLR164W ADH2P00331 348 aaKnown RBP7.16□□□□□ -1.26
SHH4YLR164W YKL070WP36087 169 aa7.16□□□□□ -1.26
SHH4YLR164W AIM29P36154 155 aa7.16□□□□□ -1.26
SHH4YLR164W YEL008WP40001 126 aa7.15□□□□□ -1.26
SHH4YLR164W ARC15P40518 154 aaRIP-Chip data7.15□□□□□ -1.26not detected
SHH4YLR164W URM1P40554 99 aaPredicted RBP7.15□□□□□ -1.26
SHH4YLR164W YLR050CQ12155 161 aaKnown RBP7.15□□□□□ -1.26
SHH4YLR164W TRP1P00912 224 aa7.14□□□□□ -1.27
SHH4YLR164W MRP49P32388 137 aa7.14□□□□□ -1.27
SHH4YLR164W MSL1P40567 111 aaPredicted RBP7.14□□□□□ -1.27
SHH4YLR164W MRPL44P19956 98 aa7.13□□□□□ -1.27
SHH4YLR164W ATP15P21306 62 aa7.13□□□□□ -1.27
SHH4YLR164W YER085CP40058 173 aa7.13□□□□□ -1.27
SHH4YLR164W BET5Q03630 159 aa7.13□□□□□ -1.27
SHH4YLR164W YMR122W-AQ3E842 84 aa7.13□□□□□ -1.27
SHH4YLR164W FYV7Q12247 151 aa7.12□□□□□ -1.27
SHH4YLR164W RPL31AP0C2H8 113 aaKnown RBP7.11□□□□□ -1.27
SHH4YLR164W YBR219CP38317 127 aa7.11□□□□□ -1.27
SHH4YLR164W YEL067CP39978 195 aa7.11□□□□□ -1.27
SHH4YLR164W YLL066W-BQ8TGJ7 56 aa7.11□□□□□ -1.27
SHH4YLR164W AIM11P87275 137 aa7.1□□□□□ -1.27
SHH4YLR164W YPL261CQ08976 102 aa7.1□□□□□ -1.27
SHH4YLR164W RPR2P40571 144 aa7.09□□□□□ -1.27
SHH4YLR164W YCL021W-AQ96VH3 125 aa7.09□□□□□ -1.27
SHH4YLR164W RPL33AP05744 107 aaKnown RBP7.07□□□□□ -1.28
SHH4YLR164W ATP5P09457 212 aa7.07□□□□□ -1.28
SHH4YLR164W RPL33BP41056 107 aaKnown RBP7.07□□□□□ -1.28
SHH4YLR164W ERI1P62651 68 aaKnown RBP7.07□□□□□ -1.28
SHH4YLR164W RPS8AP0CX39 200 aaKnown RBP7.06□□□□□ -1.28
SHH4YLR164W RPS8BP0CX40 200 aaKnown RBP7.06□□□□□ -1.28
SHH4YLR164W YKL044WP36092 106 aa7.06□□□□□ -1.28
SHH4YLR164W YKR041WP36134 250 aa7.06□□□□□ -1.28
SHH4YLR164W YLR194CQ05777 254 aa7.06□□□□□ -1.28
SHH4YLR164W DIF1O13577 133 aa7.05□□□□□ -1.28
SHH4YLR164W VTC1P40046 129 aaRIP-Chip data7.05□□□□□ -1.28not detected
SHH4YLR164W YNR077CP53758 84 aa7.05□□□□□ -1.28
SHH4YLR164W YMR295CQ03559 197 aa7.05□□□□□ -1.28
SHH4YLR164W YMR320WQ04897 101 aa7.05□□□□□ -1.28
SHH4YLR164W PBA1Q05778 276 aa7.05□□□□□ -1.28
SHH4YLR164W YCR007CP25354 239 aa7.04□□□□□ -1.28
SHH4YLR164W RPL32P38061 130 aaKnown RBP7.04□□□□□ -1.28
SHH4YLR164W CIN5P40917 295 aa7.04□□□□□ -1.28
SHH4YLR164W SPC1P46965 94 aa7.04□□□□□ -1.28
SHH4YLR164W YDR115WQ04598 105 aa7.04□□□□□ -1.28
SHH4YLR164W YDL085C-AQ3E7B7 68 aaKnown RBP7.04□□□□□ -1.28
SHH4YLR164W YPL073CP40323 161 aa7.03□□□□□ -1.28
SHH4YLR164W MRPS12P53732 153 aa7.03□□□□□ -1.28
SHH4YLR164W SAE3P89114 91 aa7.03□□□□□ -1.28
SHH4YLR164W RRT15Q3E811 62 aa7.03□□□□□ -1.28
SHH4YLR164W PAU23Q07987 124 aa7.01□□□□□ -1.29
SHH4YLR164W PAU17Q12370 124 aa7.01□□□□□ -1.29
SHH4YLR164W RPL18AP0CX49 186 aaKnown RBP7□□□□□ -1.29
SHH4YLR164W RPL18BP0CX50 186 aaKnown RBP7□□□□□ -1.29
SHH4YLR164W YBL081WP38180 368 aaKnown RBP7□□□□□ -1.29
SHH4YLR164W SHU1P38751 150 aa7□□□□□ -1.29
SHH4YLR164W YFR057WP43625 151 aa7□□□□□ -1.29
SHH4YLR164W ERG28P40030 148 aa6.99□□□□□ -1.29
SHH4YLR164W RPL28P02406 149 aaKnown RBP6.98□□□□□ -1.29
SHH4YLR164W RPF1P38805 295 aaKnown RBP6.98□□□□□ -1.29
SHH4YLR164W SVP26P38869 228 aa6.98□□□□□ -1.29
SHH4YLR164W YNL190WP53872 204 aa6.98□□□□□ -1.29
SHH4YLR164W RTC6O14464 93 aa6.97□□□□□ -1.29
SHH4YLR164W YPR195CQ06594 109 aa6.97□□□□□ -1.29
SHH4YLR164W YAL064WP39711 94 aa6.96□□□□□ -1.3
SHH4YLR164W PEX17P40155 199 aa6.96□□□□□ -1.3
SHH4YLR164W YAR029WP39549 74 aa6.95□□□□□ -1.3
SHH4YLR164W OXA1P39952 402 aa6.95□□□□□ -1.3
SHH4YLR164W LSO2Q3E772 92 aaKnown RBP6.95□□□□□ -1.3
SHH4YLR164W ENV10Q99382 181 aa6.95□□□□□ -1.3
SHH4YLR164W YAL065CO13511 128 aa6.94□□□□□ -1.3
SHH4YLR164W COX14P39103 70 aa6.94□□□□□ -1.3
SHH4YLR164W RPC10P40422 70 aa6.94□□□□□ -1.3
SHH4YLR164W IGO2Q9P305 131 aa6.94□□□□□ -1.3
SHH4YLR164W YPR010C-AA5Z2X5 72 aa6.93□□□□□ -1.3
SHH4YLR164W UGX2P32772 223 aa6.92□□□□□ -1.3
SHH4YLR164W MID2P36027 376 aa6.92□□□□□ -1.3
SHH4YLR164W TOA2P32774 122 aa6.9□□□□□ -1.3
SHH4YLR164W GLC8P41818 229 aa6.9□□□□□ -1.3
SHH4YLR164W YLR363W-AQ3E747 85 aa6.9□□□□□ -1.3
SHH4YLR164W YMR175W-AQ3E766 64 aa6.9□□□□□ -1.3
SHH4YLR164W ADH1P00330 348 aaKnown RBP6.88□□□□□ -1.31
SHH4YLR164W QCR8P08525 94 aa6.88□□□□□ -1.31
SHH4YLR164W ELC1Q03071 99 aa6.88□□□□□ -1.31
SHH4YLR164W MHR1Q06630 226 aa6.88□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms