RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C AIM34Q03673 198 aa8.58□□□□□ -1.04
SPT8YLR055C MET32Q12041 191 aa8.58□□□□□ -1.04
SPT8YLR055C YOR008C-AQ3E7B9 74 aa8.58□□□□□ -1.04
SPT8YLR055C ISD11Q6Q560 94 aa8.58□□□□□ -1.04
SPT8YLR055C HPA2Q06592 156 aa8.57□□□□□ -1.04
SPT8YLR055C VHS2P40463 436 aa8.57□□□□□ -1.04
SPT8YLR055C RPL42AP0CX27 106 aaKnown RBP8.56□□□□□ -1.04
SPT8YLR055C RPL42BP0CX28 106 aaKnown RBP8.56□□□□□ -1.04
SPT8YLR055C URM1P40554 99 aaPredicted RBP8.56□□□□□ -1.04
SPT8YLR055C SRL1Q08673 210 aa8.56□□□□□ -1.04
SPT8YLR055C YCR075W-AQ3E830 75 aa8.56□□□□□ -1.04
SPT8YLR055C YKL069WP36088 180 aa8.55□□□□□ -1.04
SPT8YLR055C DUO1P53168 247 aaKnown RBP8.55□□□□□ -1.04
SPT8YLR055C YER085CP40058 173 aa8.54□□□□□ -1.04
SPT8YLR055C YLR194CQ05777 254 aa8.54□□□□□ -1.04
SPT8YLR055C YOL085CQ99345 113 aa8.54□□□□□ -1.04
SPT8YLR055C RPS8AP0CX39 200 aaKnown RBP8.54□□□□□ -1.04
SPT8YLR055C RPS8BP0CX40 200 aaKnown RBP8.54□□□□□ -1.04
SPT8YLR055C PRM7Q12459 698 aa8.53□□□□□ -1.04
SPT8YLR055C MIC12P38341 106 aa8.52□□□□□ -1.04
SPT8YLR055C YFL065CP43539 102 aa8.52□□□□□ -1.04
SPT8YLR055C YPR203WQ08994 102 aa8.52□□□□□ -1.04
SPT8YLR055C ATP15P21306 62 aa8.52□□□□□ -1.05
SPT8YLR055C YHR022CP38763 256 aa8.52□□□□□ -1.05
SPT8YLR055C DCV1P43595 202 aa8.52□□□□□ -1.05
SPT8YLR055C KEG1P43614 200 aa8.52□□□□□ -1.05
SPT8YLR055C YML122CQ03207 126 aa8.51□□□□□ -1.05
SPT8YLR055C YBR200W-AQ3E755 54 aa8.51□□□□□ -1.05
SPT8YLR055C YPL080CQ02826 108 aa8.5□□□□□ -1.05
SPT8YLR055C MRPL23Q12487 163 aaPredicted RBP8.5□□□□□ -1.05
SPT8YLR055C YPR053CQ6Q5F3 151 aa8.5□□□□□ -1.05
SPT8YLR055C RPA12P32529 125 aaKnown RBP8.5□□□□□ -1.05
SPT8YLR055C NCE103P53615 221 aa8.49□□□□□ -1.05
SPT8YLR055C MID2P36027 376 aa8.48□□□□□ -1.05
SPT8YLR055C CCW12Q12127 133 aa8.48□□□□□ -1.05
SPT8YLR055C RPL28P02406 149 aaKnown RBP8.47□□□□□ -1.05
SPT8YLR055C COX10P21592 462 aa8.47□□□□□ -1.05
SPT8YLR055C YJR146WP47174 117 aa8.47□□□□□ -1.05
SPT8YLR055C EOS1P53938 366 aa8.47□□□□□ -1.05
SPT8YLR055C RRG8Q06109 277 aa8.47□□□□□ -1.05
SPT8YLR055C RPL16AP26784 199 aaKnown RBP8.46□□□□□ -1.06
SPT8YLR055C YCR041WP37265 110 aa8.46□□□□□ -1.06
SPT8YLR055C YHR130CP38834 111 aa8.45□□□□□ -1.06
SPT8YLR055C YIP3P53633 176 aa8.45□□□□□ -1.06
SPT8YLR055C RPL18AP0CX49 186 aaKnown RBP8.45□□□□□ -1.06
SPT8YLR055C RPL18BP0CX50 186 aaKnown RBP8.45□□□□□ -1.06
SPT8YLR055C YPR013CQ12145 317 aa8.45□□□□□ -1.06
SPT8YLR055C YNL190WP53872 204 aa8.44□□□□□ -1.06
SPT8YLR055C YOR011W-AQ3E807 68 aa8.44□□□□□ -1.06
SPT8YLR055C FIP1P45976 327 aa8.43□□□□□ -1.06
SPT8YLR055C SPG4Q04438 115 aa8.43□□□□□ -1.06
SPT8YLR055C RPL16BP26785 198 aaKnown RBP8.43□□□□□ -1.06
SPT8YLR055C UGX2P32772 223 aa8.43□□□□□ -1.06
SPT8YLR055C MRPS12P53732 153 aa8.43□□□□□ -1.06
SPT8YLR055C DSE2P38844 325 aa8.42□□□□□ -1.06
SPT8YLR055C YNL194CP40169 301 aa8.42□□□□□ -1.06
SPT8YLR055C YNL146C-AQ3E7Z1 64 aa8.42□□□□□ -1.06
SPT8YLR055C INO2P26798 304 aa8.41□□□□□ -1.06
SPT8YLR055C PEX17P40155 199 aa8.41□□□□□ -1.06
SPT8YLR055C YDL186WP48568 277 aa8.41□□□□□ -1.06
SPT8YLR055C YLR042CQ07990 161 aa8.4□□□□□ -1.06
SPT8YLR055C Q0255P03881 472 aa8.4□□□□□ -1.07
SPT8YLR055C YER135CP40082 130 aa8.4□□□□□ -1.07
SPT8YLR055C YIA6P40556 373 aa8.4□□□□□ -1.07
SPT8YLR055C TOS8P53147 276 aa8.4□□□□□ -1.07
SPT8YLR055C ABF2Q02486 183 aa8.4□□□□□ -1.07
SPT8YLR055C YIR021W-AQ3E739 70 aa8.39□□□□□ -1.07
SPT8YLR055C VPS55P47111 140 aa8.38□□□□□ -1.07
SPT8YLR055C YAL063C-AQ3E791 96 aa8.38□□□□□ -1.07
SPT8YLR055C CAX4P53223 239 aa8.38□□□□□ -1.07
SPT8YLR055C TRP1P00912 224 aa8.37□□□□□ -1.07
SPT8YLR055C HOR7Q05827 59 aa8.37□□□□□ -1.07
SPT8YLR055C YPL229WQ99395 206 aa8.37□□□□□ -1.07
SPT8YLR055C DYN1P36022 4092 aa8.37□□□□□ -1.07
SPT8YLR055C YCR085WP25650 117 aa8.36□□□□□ -1.07
SPT8YLR055C YBR209WP38311 105 aa8.36□□□□□ -1.07
SPT8YLR055C SHU1P38751 150 aa8.36□□□□□ -1.07
SPT8YLR055C KRE1P17260 313 aa8.35□□□□□ -1.07
SPT8YLR055C YGL088WP53151 121 aa8.35□□□□□ -1.07
SPT8YLR055C YGR035W-AQ45U48 73 aa8.33□□□□□ -1.08
SPT8YLR055C NRG2P38082 220 aa8.33□□□□□ -1.08
SPT8YLR055C MIG3P39943 394 aa8.33□□□□□ -1.08
SPT8YLR055C YFL041W-AQ3E817 63 aa8.33□□□□□ -1.08
SPT8YLR055C YEL008WP40001 126 aa8.32□□□□□ -1.08
SPT8YLR055C TOA2P32774 122 aa8.31□□□□□ -1.08
SPT8YLR055C SKI6P46948 246 aaPredicted RBP8.31□□□□□ -1.08
SPT8YLR055C YMR244WQ04018 355 aa8.31□□□□□ -1.08
SPT8YLR055C QCR8P08525 94 aa8.31□□□□□ -1.08
SPT8YLR055C RRT13P40042 185 aa8.31□□□□□ -1.08
SPT8YLR055C YCL021W-AQ96VH3 125 aa8.31□□□□□ -1.08
SPT8YLR055C SIM1P40472 476 aa8.3□□□□□ -1.08
SPT8YLR055C YFR035CP43608 114 aa8.3□□□□□ -1.08
SPT8YLR055C RAD6P06104 172 aa8.29□□□□□ -1.08
SPT8YLR055C AIM19P40502 157 aa8.29□□□□□ -1.08
SPT8YLR055C MRPS8Q03799 155 aa8.29□□□□□ -1.08
SPT8YLR055C AIR2Q12476 344 aaKnown RBP8.28□□□□□ -1.08
SPT8YLR055C YIL059CP40520 121 aa8.27□□□□□ -1.09
SPT8YLR055C HUR1P45820 110 aa8.26□□□□□ -1.09
SPT8YLR055C YLR361C-AQ3E795 98 aa8.26□□□□□ -1.09
SPT8YLR055C PBI2P0CT04 75 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms