RNA–Protein interactions for RNA: YKL062W

MSN4, Transcript of Stress-responsive transcriptional activator, yeastyeast

Gene MSN4, Length 1,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN4YKL062W TY1B-LR2P0C2I5 1755 aa2.64□□□□□ -1.99
MSN4YKL062W TY1B-LR3P0C2I6 1755 aaKnown RBP2.64□□□□□ -1.99
MSN4YKL062W TY1B-PR1P0C2I9 1755 aaKnown RBP2.64□□□□□ -1.99
MSN4YKL062W TY1B-PR3P0C2J1 1755 aaKnown RBP2.64□□□□□ -1.99
MSN4YKL062W TY1B-JR1P47098 1755 aa2.64□□□□□ -1.99
MSN4YKL062W TY1B-ML2Q03434 1755 aaKnown RBP2.64□□□□□ -1.99
MSN4YKL062W TY1B-ER1Q03612 1755 aa2.64□□□□□ -1.99
MSN4YKL062W TY1B-ML1Q04711 1755 aaKnown RBP2.64□□□□□ -1.99
MSN4YKL062W TY1B-GR2Q12269 1755 aa2.64□□□□□ -1.99
MSN4YKL062W TY1B-OLQ12273 1755 aa2.64□□□□□ -1.99
MSN4YKL062W TY1B-PLQ12414 1755 aaKnown RBP2.64□□□□□ -1.99
MSN4YKL062W YHR007C-AQ07074 71 aa2.64□□□□□ -1.99
MSN4YKL062W YLR285C-AQ3E771 56 aa2.64□□□□□ -1.99
MSN4YKL062W TY1B-GR3Q12316 1755 aa2.64□□□□□ -1.99
MSN4YKL062W TY1B-ORQ92393 1755 aa2.64□□□□□ -1.99
MSN4YKL062W DNA2P38859 1522 aa2.63□□□□□ -1.99
MSN4YKL062W RPS22BQ3E7Y3 130 aaKnown RBP2.63□□□□□ -1.99
MSN4YKL062W SIN3P22579 1536 aa2.63□□□□□ -1.99
MSN4YKL062W ESP1Q03018 1630 aa2.63□□□□□ -1.99
MSN4YKL062W YGL014C-AP0C5N1 53 aa2.62□□□□□ -1.99
MSN4YKL062W YPR145C-AQ2V2P0 78 aa2.62□□□□□ -1.99
MSN4YKL062W FLO9P39712 1322 aa2.62□□□□□ -1.99
MSN4YKL062W POL1P13382 1468 aa2.62□□□□□ -1.99
MSN4YKL062W TCB3Q03640 1545 aaKnown RBP2.62□□□□□ -1.99
MSN4YKL062W NHP2P32495 156 aaPredicted RBP2.62□□□□□ -1.99
MSN4YKL062W SSS1P35179 80 aa2.62□□□□□ -1.99
MSN4YKL062W LST8P41318 303 aa2.62□□□□□ -1.99
MSN4YKL062W FAS2P19097 1887 aaKnown RBP2.61□□□□□ -1.99
MSN4YKL062W AIM4P38305 123 aaPredicted RBP2.61□□□□□ -1.99
MSN4YKL062W TAR1Q8TGM6 124 aa2.61□□□□□ -1.99
MSN4YKL062W YOL118CQ08259 102 aa2.6□□□□□ -1.99
MSN4YKL062W MMS22Q06164 1454 aa2.6□□□□□ -1.99
MSN4YKL062W DSE2P38844 325 aa2.6□□□□□ -1.99
MSN4YKL062W LSM6Q06406 86 aaKnown RBP2.6□□□□□ -1.99
MSN4YKL062W YOL131WQ08270 108 aa2.6□□□□□ -1.99
MSN4YKL062W MRPL38P35996 138 aaPredicted RBP2.59□□□□□ -1.99
MSN4YKL062W MIC27P50945 234 aa2.59□□□□□ -1.99
MSN4YKL062W YCR095W-AQ3E787 52 aa2.59□□□□□ -1.99
MSN4YKL062W MLP1Q02455 1875 aaKnown RBP2.58□□□□□ -2
MSN4YKL062W PFY1P07274 126 aa2.58□□□□□ -2
MSN4YKL062W YEL008WP40001 126 aa2.58□□□□□ -2
MSN4YKL062W SWM2P40342 146 aa2.58□□□□□ -2
MSN4YKL062W SPC1P46965 94 aa2.58□□□□□ -2
MSN4YKL062W MIX17Q03667 156 aa2.58□□□□□ -2
MSN4YKL062W YDR381C-AQ3E6R5 114 aa2.58□□□□□ -2
MSN4YKL062W MHF2Q3E829 80 aa2.58□□□□□ -2
MSN4YKL062W RPL22AP05749 121 aaKnown RBP2.58□□□□□ -2
MSN4YKL062W ATX1P38636 73 aa2.58□□□□□ -2
MSN4YKL062W SED1Q01589 338 aa2.58□□□□□ -2
MSN4YKL062W YMR122CQ03879 124 aa2.58□□□□□ -2
MSN4YKL062W YMR321CQ04898 105 aa2.58□□□□□ -2
MSN4YKL062W YBR292CP38357 123 aa2.57□□□□□ -2
MSN4YKL062W YHL037CP38733 133 aa2.57□□□□□ -2
MSN4YKL062W YIL163CP40448 117 aa2.57□□□□□ -2
MSN4YKL062W CYR1P08678 2026 aaKnown RBP2.56□□□□□ -2
MSN4YKL062W RPL33AP05744 107 aaKnown RBP2.56□□□□□ -2
MSN4YKL062W MRP17P28778 131 aa2.56□□□□□ -2
MSN4YKL062W SMC4Q12267 1418 aa2.56□□□□□ -2
MSN4YKL062W BPT1P14772 1559 aa2.55□□□□□ -2
MSN4YKL062W DOP1Q03921 1698 aa2.55□□□□□ -2
MSN4YKL062W YHR214C-DP0CX93 97 aa2.55□□□□□ -2
MSN4YKL062W VAM10Q08474 114 aa2.55□□□□□ -2
MSN4YKL062W SRB8P25648 1427 aa2.55□□□□□ -2
MSN4YKL062W YOR343CQ12484 108 aa2.54□□□□□ -2
MSN4YKL062W YSF3P0C074 85 aaPredicted RBP2.54□□□□□ -2
MSN4YKL062W PAU6P0CE90 120 aa2.54□□□□□ -2
MSN4YKL062W PAU18P0CE91 120 aa2.54□□□□□ -2
MSN4YKL062W SNA2P56508 79 aa2.54□□□□□ -2
MSN4YKL062W YCL048W-AQ2V2Q2 79 aa2.54□□□□□ -2
MSN4YKL062W TY1B-JR2P47100 1755 aaKnown RBP2.54□□□□□ -2
MSN4YKL062W TY1B-ER2Q03619 1755 aa2.54□□□□□ -2
MSN4YKL062W TY1B-MR1Q04214 1755 aa2.54□□□□□ -2
MSN4YKL062W TY1B-MR2Q04670 1755 aaKnown RBP2.54□□□□□ -2
MSN4YKL062W TY1B-LR1Q12088 1755 aaKnown RBP2.54□□□□□ -2
MSN4YKL062W TY1B-NL1Q12112 1755 aa2.54□□□□□ -2
MSN4YKL062W TY1B-GR1Q12141 1755 aa2.54□□□□□ -2
MSN4YKL062W TY1B-BLQ12490 1755 aa2.54□□□□□ -2
MSN4YKL062W VPS55P47111 140 aa2.53□□□□□ -2
MSN4YKL062W ACC1Q00955 2233 aaKnown RBP2.53□□□□□ -2
MSN4YKL062W XRN1P22147 1528 aaKnown RBP2.52□□□□□ -2.01
MSN4YKL062W YBL071CP38185 102 aa2.52□□□□□ -2.01
MSN4YKL062W PAU23Q07987 124 aa2.52□□□□□ -2.01
MSN4YKL062W PAU17Q12370 124 aa2.52□□□□□ -2.01
MSN4YKL062W YPL038W-AQ3E7B4 63 aa2.52□□□□□ -2.01
MSN4YKL062W PDX3P38075 228 aaKnown RBP2.52□□□□□ -2.01
MSN4YKL062W YNL198CP40166 100 aa2.52□□□□□ -2.01
MSN4YKL062W IRC21Q04772 201 aa2.52□□□□□ -2.01
MSN4YKL062W HAP1P0CE41 1502 aa2.51□□□□□ -2.01
MSN4YKL062W ECM29P38737 1868 aa2.51□□□□□ -2.01
MSN4YKL062W CCW12Q12127 133 aa2.51□□□□□ -2.01
MSN4YKL062W YFL041W-AQ3E817 63 aa2.51□□□□□ -2.01
MSN4YKL062W TIM12P32830 109 aa2.5□□□□□ -2.01
MSN4YKL062W PRM7Q12459 698 aa2.5□□□□□ -2.01
MSN4YKL062W YIL134C-AQ45U18 67 aa2.5□□□□□ -2.01
MSN4YKL062W UFD4P33202 1483 aa2.5□□□□□ -2.01
MSN4YKL062W CCW14O13547 238 aa2.5□□□□□ -2.01
MSN4YKL062W MRPS12P53732 153 aa2.5□□□□□ -2.01
MSN4YKL062W MRX7P53869 86 aa2.5□□□□□ -2.01
MSN4YKL062W YOR105WQ08504 108 aa2.5□□□□□ -2.01
MSN4YKL062W COA3Q3E7B2 85 aa2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 71.2 ms