RNA–Protein interactions for RNA: YKL017C

HCS1, Transcript of Hexameric DNA polymerase alpha-associated DNA helicase A, yeastyeast

Gene HCS1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HCS1YKL017C EMC5P40540 141 aa1.25□□□□□ -2.21
HCS1YKL017C HUR1P45820 110 aa1.25□□□□□ -2.21
HCS1YKL017C AVO2Q04749 426 aa1.25□□□□□ -2.21
HCS1YKL017C RDS3Q06835 107 aaPredicted RBP1.25□□□□□ -2.21
HCS1YKL017C NAT5Q08689 176 aa1.25□□□□□ -2.21
HCS1YKL017C MLP1Q02455 1875 aaKnown RBP1.25□□□□□ -2.21
HCS1YKL017C BPT1P14772 1559 aa1.24□□□□□ -2.21
HCS1YKL017C ECM12O13529 151 aa1.24□□□□□ -2.21
HCS1YKL017C FPR1P20081 114 aaKnown RBP1.24□□□□□ -2.21
HCS1YKL017C FMT1P32785 401 aa1.24□□□□□ -2.21
HCS1YKL017C MRPL11P36521 249 aaPredicted RBP1.24□□□□□ -2.21
HCS1YKL017C ATG8P38182 117 aaRIP-Chip data1.24□□□□□ -2.21not detected
HCS1YKL017C YEL014CP39999 101 aa1.24□□□□□ -2.21
HCS1YKL017C YIL014C-AQ02598 104 aa1.24□□□□□ -2.21
HCS1YKL017C MIX14Q04341 121 aa1.24□□□□□ -2.21
HCS1YKL017C YDR114CQ04597 100 aa1.24□□□□□ -2.21
HCS1YKL017C YOL131WQ08270 108 aa1.24□□□□□ -2.21
HCS1YKL017C DAD1Q12248 94 aa1.24□□□□□ -2.21
HCS1YKL017C VMA9Q3E7B6 73 aa1.24□□□□□ -2.21
HCS1YKL017C YNR034W-AQ3E841 98 aa1.24□□□□□ -2.21
HCS1YKL017C TY4B-JP47024 1803 aa1.24□□□□□ -2.21
HCS1YKL017C DOP1Q03921 1698 aa1.24□□□□□ -2.21
HCS1YKL017C YRF1-3P0CX14 1859 aa1.24□□□□□ -2.21
HCS1YKL017C YRF1-7P0CX15 1859 aa1.24□□□□□ -2.21
HCS1YKL017C YRF1-6P53819 1859 aa1.24□□□□□ -2.21
HCS1YKL017C RPS25BP0C0T4 108 aaKnown RBP1.24□□□□□ -2.21
HCS1YKL017C YKR045CP36138 183 aa1.24□□□□□ -2.21
HCS1YKL017C SVP26P38869 228 aa1.24□□□□□ -2.21
HCS1YKL017C YIR020CP40575 100 aa1.24□□□□□ -2.21
HCS1YKL017C CYT2Q00873 224 aa1.24□□□□□ -2.21
HCS1YKL017C RPS25AQ3E792 108 aaPredicted RBP1.24□□□□□ -2.21
HCS1YKL017C OST5Q92316 86 aa1.24□□□□□ -2.21
HCS1YKL017C PAU19P0CE85 124 aa1.23□□□□□ -2.21
HCS1YKL017C PAU3P25610 124 aa1.23□□□□□ -2.21
HCS1YKL017C VMA21P41806 77 aa1.23□□□□□ -2.21
HCS1YKL017C YMR030W-AQ3E760 96 aa1.23□□□□□ -2.21
HCS1YKL017C NUP188P52593 1655 aaKnown RBP1.23□□□□□ -2.21
HCS1YKL017C PAI3P01094 68 aa1.22□□□□□ -2.21
HCS1YKL017C YHR022CP38763 256 aa1.22□□□□□ -2.21
HCS1YKL017C CYB5P40312 120 aa1.22□□□□□ -2.21
HCS1YKL017C YJL144WP47009 104 aa1.22□□□□□ -2.21
HCS1YKL017C YDR042CQ03205 200 aa1.22□□□□□ -2.21
HCS1YKL017C YLR194CQ05777 254 aa1.22□□□□□ -2.21
HCS1YKL017C YRF1-2P40105 1681 aa1.22□□□□□ -2.21
HCS1YKL017C FAS1P07149 2051 aaKnown RBP1.22□□□□□ -2.21
HCS1YKL017C VTH1P40438 1549 aa1.22□□□□□ -2.21
HCS1YKL017C VTH2P40890 1549 aa1.22□□□□□ -2.21
HCS1YKL017C RIF1P29539 1916 aa1.22□□□□□ -2.21
HCS1YKL017C MRP17P28778 131 aa1.22□□□□□ -2.21
HCS1YKL017C COX23P38824 151 aa1.22□□□□□ -2.21
HCS1YKL017C YFL065CP43539 102 aa1.22□□□□□ -2.21
HCS1YKL017C RPL22BP56628 122 aaKnown RBP1.22□□□□□ -2.21
HCS1YKL017C PRM3Q08931 133 aa1.22□□□□□ -2.21
HCS1YKL017C YPR203WQ08994 102 aa1.22□□□□□ -2.21
HCS1YKL017C PRM7Q12459 698 aa1.22□□□□□ -2.21
HCS1YKL017C URB1P34241 1764 aaKnown RBP1.21□□□□□ -2.22
HCS1YKL017C IML1P47170 1584 aa1.21□□□□□ -2.22
HCS1YKL017C RPA190P10964 1664 aaKnown RBP1.21□□□□□ -2.22
HCS1YKL017C QCR8P08525 94 aa1.21□□□□□ -2.22
HCS1YKL017C YJL197C-AP0C5P0 93 aa1.21□□□□□ -2.22
HCS1YKL017C YHR213WP0CI67 198 aa1.21□□□□□ -2.22
HCS1YKL017C RPB7P34087 171 aa1.21□□□□□ -2.22
HCS1YKL017C SWM2P40342 146 aa1.21□□□□□ -2.22
HCS1YKL017C CWP2P43497 92 aa1.21□□□□□ -2.22
HCS1YKL017C RGM1Q00453 211 aa1.21□□□□□ -2.22
HCS1YKL017C SRX1P36077 127 aa1.2□□□□□ -2.22
HCS1YKL017C YHR138CP38841 114 aaPredicted RBP1.2□□□□□ -2.22
HCS1YKL017C YNL198CP40166 100 aa1.2□□□□□ -2.22
HCS1YKL017C MET31Q03081 177 aa1.2□□□□□ -2.22
HCS1YKL017C PAU23Q07987 124 aa1.2□□□□□ -2.22
HCS1YKL017C PAU17Q12370 124 aa1.2□□□□□ -2.22
HCS1YKL017C EMC6Q12431 108 aa1.2□□□□□ -2.22
HCS1YKL017C YLR363W-AQ3E747 85 aa1.2□□□□□ -2.22
HCS1YKL017C BCK1Q01389 1478 aa1.2□□□□□ -2.22
HCS1YKL017C RPL36BO14455 100 aaKnown RBP1.2□□□□□ -2.22
HCS1YKL017C RPL36AP05745 100 aaPredicted RBP1.2□□□□□ -2.22
HCS1YKL017C PAU16P35994 123 aa1.2□□□□□ -2.22
HCS1YKL017C PAU15P40585 124 aa1.2□□□□□ -2.22
HCS1YKL017C SUS1Q6WNK7 96 aa1.2□□□□□ -2.22
HCS1YKL017C BNI1P41832 1953 aa1.2□□□□□ -2.22
HCS1YKL017C NRG2P38082 220 aa1.19□□□□□ -2.22
HCS1YKL017C GCV3P39726 170 aaPredicted RBP1.19□□□□□ -2.22
HCS1YKL017C PAU5P43575 122 aa1.19□□□□□ -2.22
HCS1YKL017C HPA2Q06592 156 aa1.19□□□□□ -2.22
HCS1YKL017C POC4Q12245 148 aaPredicted RBP1.19□□□□□ -2.22
HCS1YKL017C YMR175W-AQ3E766 64 aa1.19□□□□□ -2.22
HCS1YKL017C MHF1Q3E835 90 aa1.19□□□□□ -2.22
HCS1YKL017C YCR085WP25650 117 aa1.19□□□□□ -2.22
HCS1YKL017C YBR027CP38220 110 aa1.19□□□□□ -2.22
HCS1YKL017C DSE2P38844 325 aa1.19□□□□□ -2.22
HCS1YKL017C ICY1Q04329 127 aa1.19□□□□□ -2.22
HCS1YKL017C YHR007C-AQ07074 71 aa1.19□□□□□ -2.22
HCS1YKL017C SLH1P53327 1967 aaKnown RBP1.18□□□□□ -2.22
HCS1YKL017C RPL22AP05749 121 aaKnown RBP1.18□□□□□ -2.22
HCS1YKL017C YGL014C-AP0C5N1 53 aa1.18□□□□□ -2.22
HCS1YKL017C HMRA2P0CY13 119 aa1.18□□□□□ -2.22
HCS1YKL017C YEL008WP40001 126 aa1.18□□□□□ -2.22
HCS1YKL017C RSM18P40033 138 aa1.18□□□□□ -2.22
HCS1YKL017C YLR285C-AQ3E771 56 aa1.18□□□□□ -2.22
HCS1YKL017C VMR1P38735 1592 aa1.18□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 39 ms