RNA–Protein interactions for RNA: YJR104C

SOD1, Transcript of Cytosolic copper-zinc superoxide dismutase, yeast

Gene SOD1, Length 465 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOD1	YJR104C	YOR343C	Q12484	108 aa		2.82	□□□□□ -1.96
SOD1	YJR104C	KSH1	Q8TGJ3	72 aa		2.82	□□□□□ -1.96
SOD1	YJR104C	IGO2	Q9P305	131 aa		2.82	□□□□□ -1.96
SOD1	YJR104C	RPL30	P14120	105 aa	Known RBP	2.81	□□□□□ -1.96
SOD1	YJR104C	BET1	P22804	142 aa		2.81	□□□□□ -1.96
SOD1	YJR104C	TOM40	P23644	387 aa	Known RBP	2.81	□□□□□ -1.96
SOD1	YJR104C	SWD3	P38123	315 aa		2.81	□□□□□ -1.96
SOD1	YJR104C	YIA6	P40556	373 aa		2.81	□□□□□ -1.96
SOD1	YJR104C	YFL051C	P43552	160 aa		2.81	□□□□□ -1.96
SOD1	YJR104C	YGR219W	P53307	113 aa		2.81	□□□□□ -1.96
SOD1	YJR104C	YNR077C	P53758	84 aa		2.81	□□□□□ -1.96
SOD1	YJR104C	MIX14	Q04341	121 aa		2.81	□□□□□ -1.96
SOD1	YJR104C	YMR317W	Q04893	1140 aa		2.81	□□□□□ -1.96
SOD1	YJR104C	IRC19	Q07843	230 aa		2.81	□□□□□ -1.96
SOD1	YJR104C	YDR381C-A	Q3E6R5	114 aa		2.81	□□□□□ -1.96
SOD1	YJR104C	YMR175W-A	Q3E766	64 aa		2.81	□□□□□ -1.96
SOD1	YJR104C	RPL18A	P0CX49	186 aa	Known RBP	2.8	□□□□□ -1.96
SOD1	YJR104C	RPL18B	P0CX50	186 aa	Known RBP	2.8	□□□□□ -1.96
SOD1	YJR104C	MRS3	P10566	314 aa		2.8	□□□□□ -1.96
SOD1	YJR104C	FPR2	P32472	135 aa		2.8	□□□□□ -1.96
SOD1	YJR104C	YSY6	P38374	65 aa		2.8	□□□□□ -1.96
SOD1	YJR104C	PET8	P38921	284 aa		2.8	□□□□□ -1.96
SOD1	YJR104C	YEL067C	P39978	195 aa		2.8	□□□□□ -1.96
SOD1	YJR104C	TOM7	P53507	60 aa		2.8	□□□□□ -1.96
SOD1	YJR104C	RSM19	P53733	91 aa	Predicted RBP	2.8	□□□□□ -1.96
SOD1	YJR104C	NCE101	Q02820	53 aa		2.8	□□□□□ -1.96
SOD1	YJR104C	MGR2	Q02889	113 aa		2.8	□□□□□ -1.96
SOD1	YJR104C	YMR254C	Q04838	102 aa		2.8	□□□□□ -1.96
SOD1	YJR104C	IRC23	Q08416	157 aa		2.8	□□□□□ -1.96
SOD1	YJR104C	EMC6	Q12431	108 aa		2.8	□□□□□ -1.96
SOD1	YJR104C	YLR111W	Q12528	110 aa		2.8	□□□□□ -1.96
SOD1	YJR104C	YGL258W-A	Q3E740	77 aa		2.8	□□□□□ -1.96
SOD1	YJR104C	UBC4	P15731	148 aa		2.79	□□□□□ -1.96
SOD1	YJR104C	RPL16B	P26785	198 aa	Known RBP	2.79	□□□□□ -1.96
SOD1	YJR104C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	2.79	□□□□□ -1.96	not detected
SOD1	YJR104C	MBB1	P39534	108 aa		2.79	□□□□□ -1.96
SOD1	YJR104C	YAR029W	P39549	74 aa		2.79	□□□□□ -1.96
SOD1	YJR104C	PEX22	P39718	180 aa		2.79	□□□□□ -1.96
SOD1	YJR104C	SIM1	P40472	476 aa		2.79	□□□□□ -1.96
SOD1	YJR104C	YNL046W	P53956	172 aa		2.79	□□□□□ -1.96
SOD1	YJR104C	HAL1	Q01766	294 aa		2.79	□□□□□ -1.96
SOD1	YJR104C	YHP1	Q04116	353 aa		2.79	□□□□□ -1.96
SOD1	YJR104C	YOL118C	Q08259	102 aa		2.79	□□□□□ -1.96
SOD1	YJR104C	TIM22	Q12328	207 aa		2.79	□□□□□ -1.96
SOD1	YJR104C	YHR214C-E	Q8TGK0	99 aa		2.79	□□□□□ -1.96
SOD1	YJR104C	YER175W-A	Q8TGU4	54 aa		2.79	□□□□□ -1.96
SOD1	YJR104C	RPL28	P02406	149 aa	Known RBP	2.78	□□□□□ -1.96
SOD1	YJR104C	PFY1	P07274	126 aa		2.78	□□□□□ -1.96
SOD1	YJR104C	RPL42A	P0CX27	106 aa	Known RBP	2.78	□□□□□ -1.96
SOD1	YJR104C	RPL42B	P0CX28	106 aa	Known RBP	2.78	□□□□□ -1.96
SOD1	YJR104C	HMRA2	P0CY13	119 aa		2.78	□□□□□ -1.96
SOD1	YJR104C	IES6	P32617	166 aa		2.78	□□□□□ -1.96
SOD1	YJR104C	YKR032W	P36127	104 aa		2.78	□□□□□ -1.96
SOD1	YJR104C	YER079W	P40052	210 aa	Known RBP	2.78	□□□□□ -1.96
SOD1	YJR104C	YER187W	P40102	141 aa		2.78	□□□□□ -1.96
SOD1	YJR104C	AIM19	P40502	157 aa		2.78	□□□□□ -1.96
SOD1	YJR104C	DAD4	P69851	72 aa		2.78	□□□□□ -1.96
SOD1	YJR104C	HSK3	P69852	69 aa		2.78	□□□□□ -1.96
SOD1	YJR104C	YLR194C	Q05777	254 aa		2.78	□□□□□ -1.96
SOD1	YJR104C	YLR281C	Q05863	155 aa		2.78	□□□□□ -1.96
SOD1	YJR104C	GAT3	Q07928	141 aa		2.78	□□□□□ -1.96
SOD1	YJR104C	RRS1	Q08746	203 aa	Known RBP	2.78	□□□□□ -1.96
SOD1	YJR104C	YOR192C-C	Q3E736	78 aa		2.78	□□□□□ -1.96
SOD1	YJR104C	CYR1	P08678	2026 aa	Known RBP	2.77	□□□□□ -1.97
SOD1	YJR104C	MPC2	P38857	129 aa		2.77	□□□□□ -1.97
SOD1	YJR104C	CTR2	P38865	189 aa		2.77	□□□□□ -1.97
SOD1	YJR104C	HUA1	P40325	198 aa		2.77	□□□□□ -1.97
SOD1	YJR104C	TOS6	P48560	102 aa		2.77	□□□□□ -1.97
SOD1	YJR104C	API2	Q04413	109 aa		2.77	□□□□□ -1.97
SOD1	YJR104C	PBA1	Q05778	276 aa		2.77	□□□□□ -1.97
SOD1	YJR104C	COA3	Q3E7B2	85 aa		2.77	□□□□□ -1.97
SOD1	YJR104C	YDL022C-A	P0C5L6	82 aa		2.76	□□□□□ -1.97
SOD1	YJR104C	RPB9	P27999	122 aa		2.76	□□□□□ -1.97
SOD1	YJR104C	MTC6	P38849	526 aa		2.76	□□□□□ -1.97
SOD1	YJR104C	VTC1	P40046	129 aa	RIP-Chip data	2.76	□□□□□ -1.97	not detected
SOD1	YJR104C	YNL208W	P40159	199 aa	Known RBP	2.76	□□□□□ -1.97
SOD1	YJR104C	VHS2	P40463	436 aa		2.76	□□□□□ -1.97
SOD1	YJR104C	YIL029C	P40538	142 aa		2.76	□□□□□ -1.97
SOD1	YJR104C	YFR054C	P43622	192 aa		2.76	□□□□□ -1.97
SOD1	YJR104C	ATP23	P53722	227 aa		2.76	□□□□□ -1.97
SOD1	YJR104C	TMC1	Q08422	150 aa	Predicted RBP	2.76	□□□□□ -1.97
SOD1	YJR104C	YER145C-A	A0A023PYF4	145 aa		2.75	□□□□□ -1.97
SOD1	YJR104C	DCV1	P43595	202 aa		2.75	□□□□□ -1.97
SOD1	YJR104C	YMR181C	Q03231	154 aa		2.75	□□□□□ -1.97
SOD1	YJR104C	NIP7	Q08962	181 aa	Known RBP	2.75	□□□□□ -1.97
SOD1	YJR104C	PPT2	Q12036	173 aa		2.75	□□□□□ -1.97
SOD1	YJR104C	MXR2	P25566	168 aa		2.74	□□□□□ -1.97
SOD1	YJR104C	AGA1	P32323	725 aa		2.74	□□□□□ -1.97
SOD1	YJR104C	SPT4	P32914	102 aa	Predicted RBP	2.74	□□□□□ -1.97
SOD1	YJR104C	RPS27A	P35997	82 aa	Known RBP	2.74	□□□□□ -1.97
SOD1	YJR104C	AIM4	P38305	123 aa	Predicted RBP	2.74	□□□□□ -1.97
SOD1	YJR104C	RPS27B	P38711	82 aa		2.74	□□□□□ -1.97
SOD1	YJR104C	YHR022C	P38763	256 aa		2.74	□□□□□ -1.97
SOD1	YJR104C	SPI1	P40092	148 aa		2.74	□□□□□ -1.97
SOD1	YJR104C	YMR141C	P40211	102 aa		2.74	□□□□□ -1.97
SOD1	YJR104C	YDL009C	Q12210	107 aa		2.74	□□□□□ -1.97
SOD1	YJR104C	SPO24	Q3E752	67 aa		2.74	□□□□□ -1.97
SOD1	YJR104C	YLR342W-A	Q3E810	57 aa		2.74	□□□□□ -1.97
SOD1	YJR104C	FAS1	P07149	2051 aa	Known RBP	2.73	□□□□□ -1.97
SOD1	YJR104C	YAL064W-B	O13512	126 aa		2.73	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 73.5 ms