RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W CAT8P39113 1433 aa-0.79□□□□□ -2.54
RPF1YHR088W YPR117WQ06116 2489 aa-0.79□□□□□ -2.54
RPF1YHR088W YCR099CP25657 155 aa-0.79□□□□□ -2.54
RPF1YHR088W TDA2P40045 126 aa-0.79□□□□□ -2.54
RPF1YHR088W RPC10P40422 70 aa-0.79□□□□□ -2.54
RPF1YHR088W YGL204CP53089 101 aa-0.79□□□□□ -2.54
RPF1YHR088W RUB1Q03919 77 aa-0.79□□□□□ -2.54
RPF1YHR088W SPC24Q04477 213 aa-0.79□□□□□ -2.54
RPF1YHR088W TY1B-BLQ12490 1755 aa-0.8□□□□□ -2.54
RPF1YHR088W GTT1P40582 234 aa-0.8□□□□□ -2.54
RPF1YHR088W YPL038W-AQ3E7B4 63 aa-0.8□□□□□ -2.54
RPF1YHR088W YLR419WQ06698 1435 aaKnown RBP-0.81□□□□□ -2.54
RPF1YHR088W YRF1-2P40105 1681 aa-0.81□□□□□ -2.54
RPF1YHR088W YLR118CQ12354 227 aa-0.82□□□□□ -2.54
RPF1YHR088W YLR365WQ7LIF2 110 aa-0.82□□□□□ -2.54
RPF1YHR088W SSN2P38931 1420 aa-0.82□□□□□ -2.54
RPF1YHR088W GCN1P33892 2672 aaKnown RBP-0.82□□□□□ -2.54
RPF1YHR088W PMD1P32634 1753 aa-0.83□□□□□ -2.54
RPF1YHR088W YHR138CP38841 114 aaPredicted RBP-0.83□□□□□ -2.54
RPF1YHR088W COX12Q01519 83 aa-0.83□□□□□ -2.54
RPF1YHR088W PAU16P35994 123 aa-0.84□□□□□ -2.54
RPF1YHR088W RPB11P38902 120 aa-0.84□□□□□ -2.54
RPF1YHR088W PAU15P40585 124 aa-0.84□□□□□ -2.54
RPF1YHR088W AIM11P87275 137 aa-0.84□□□□□ -2.54
RPF1YHR088W NKP2Q06162 153 aa-0.84□□□□□ -2.54
RPF1YHR088W TY1B-LR3P0C2I6 1755 aaKnown RBP-0.84□□□□□ -2.54
RPF1YHR088W TY1B-PR3P0C2J1 1755 aaKnown RBP-0.84□□□□□ -2.54
RPF1YHR088W MRP49P32388 137 aa-0.85□□□□□ -2.55
RPF1YHR088W YAR029WP39549 74 aa-0.85□□□□□ -2.55
RPF1YHR088W MRX7P53869 86 aa-0.85□□□□□ -2.55
RPF1YHR088W ICY1Q04329 127 aa-0.85□□□□□ -2.55
RPF1YHR088W YCR108CQ3E819 63 aa-0.85□□□□□ -2.55
RPF1YHR088W YBR292CP38357 123 aa-0.86□□□□□ -2.55
RPF1YHR088W RSM18P40033 138 aa-0.86□□□□□ -2.55
RPF1YHR088W DYN2Q02647 92 aa-0.86□□□□□ -2.55
RPF1YHR088W YLR099W-AQ3E798 87 aa-0.86□□□□□ -2.55
RPF1YHR088W TEL1P38110 2787 aa-0.87□□□□□ -2.55
RPF1YHR088W HUR1P45820 110 aa-0.87□□□□□ -2.55
RPF1YHR088W YIL134C-AQ45U18 67 aa-0.87□□□□□ -2.55
RPF1YHR088W NUM1Q00402 2748 aa-0.87□□□□□ -2.55
RPF1YHR088W SRB8P25648 1427 aa-0.88□□□□□ -2.55
RPF1YHR088W BPT1P14772 1559 aa-0.88□□□□□ -2.55
RPF1YHR088W CSF1Q12150 2958 aa-0.89□□□□□ -2.55
RPF1YHR088W BUD23P25627 275 aaPredicted RBP-0.89□□□□□ -2.55
RPF1YHR088W HKR1P41809 1802 aa-0.89□□□□□ -2.55
RPF1YHR088W TOR1P35169 2470 aa-0.9□□□□□ -2.55
RPF1YHR088W YJR107C-AP0CT86 78 aa-0.9□□□□□ -2.55
RPF1YHR088W YLR042CQ07990 161 aa-0.9□□□□□ -2.55
RPF1YHR088W QCR6P00127 147 aa-0.91□□□□□ -2.56
RPF1YHR088W VMA7P39111 118 aa-0.91□□□□□ -2.56
RPF1YHR088W YIR021W-AQ3E739 70 aa-0.91□□□□□ -2.56
RPF1YHR088W YNR034W-AQ3E841 98 aa-0.91□□□□□ -2.56
RPF1YHR088W BPH1P25356 2167 aa-0.93□□□□□ -2.56
RPF1YHR088W NTE1Q04958 1679 aa-0.93□□□□□ -2.56
RPF1YHR088W PAU6P0CE90 120 aa-0.93□□□□□ -2.56
RPF1YHR088W PAU18P0CE91 120 aa-0.93□□□□□ -2.56
RPF1YHR088W VMA21P41806 77 aa-0.93□□□□□ -2.56
RPF1YHR088W RPL38P49167 78 aaKnown RBP-0.93□□□□□ -2.56
RPF1YHR088W YCR095W-AQ3E787 52 aa-0.93□□□□□ -2.56
RPF1YHR088W MRP17P28778 131 aa-0.94□□□□□ -2.56
RPF1YHR088W RPS29AP41057 56 aaKnown RBP-0.94□□□□□ -2.56
RPF1YHR088W SWC7Q06707 132 aa-0.94□□□□□ -2.56
RPF1YHR088W PAU20Q08322 120 aa-0.94□□□□□ -2.56
RPF1YHR088W RTR2Q12378 196 aa-0.94□□□□□ -2.56
RPF1YHR088W YRF1-1P0CX20 1796 aa-0.95□□□□□ -2.56
RPF1YHR088W YRF1-5P0CX21 1796 aa-0.95□□□□□ -2.56
RPF1YHR088W YRF1-8P0CX22 1796 aa-0.95□□□□□ -2.56
RPF1YHR088W KRE5P22023 1365 aa-0.96□□□□□ -2.56
RPF1YHR088W BUD4P47136 1447 aa-0.96□□□□□ -2.56
RPF1YHR088W ROX3P25046 220 aa-0.96□□□□□ -2.56
RPF1YHR088W SRB6P32570 121 aa-0.96□□□□□ -2.56
RPF1YHR088W PAU5P43575 122 aa-0.96□□□□□ -2.56
RPF1YHR088W SNA2P56508 79 aa-0.96□□□□□ -2.56
RPF1YHR088W SPC2Q04969 178 aa-0.96□□□□□ -2.56
RPF1YHR088W YDR381C-AQ3E6R5 114 aa-0.96□□□□□ -2.56
RPF1YHR088W MIC10Q96VH5 97 aa-0.96□□□□□ -2.56
RPF1YHR088W LYS2P07702 1392 aa-0.96□□□□□ -2.56
RPF1YHR088W TY1B-BRQ12193 1756 aa-0.97□□□□□ -2.56
RPF1YHR088W APS2Q00381 147 aa-0.97□□□□□ -2.56
RPF1YHR088W YDR246W-AQ3E763 66 aa-0.97□□□□□ -2.56
RPF1YHR088W PDX3P38075 228 aaKnown RBP-0.98□□□□□ -2.57
RPF1YHR088W YBL071CP38185 102 aa-0.98□□□□□ -2.57
RPF1YHR088W AIM19P40502 157 aa-0.98□□□□□ -2.57
RPF1YHR088W YGR025WP53216 100 aa-0.98□□□□□ -2.57
RPF1YHR088W YOS1Q3E834 85 aa-0.98□□□□□ -2.57
RPF1YHR088W IRA1P18963 3092 aa-0.99□□□□□ -2.57
RPF1YHR088W YER039C-AP0CD97 72 aa-0.99□□□□□ -2.57
RPF1YHR088W MIX14Q04341 121 aa-0.99□□□□□ -2.57
RPF1YHR088W COX7P10174 60 aa-1□□□□□ -2.57
RPF1YHR088W YHR050W-AQ05451 56 aa-1.01□□□□□ -2.57
RPF1YHR088W YNL042W-BQ3E7Z2 85 aa-1.01□□□□□ -2.57
RPF1YHR088W Q0032Q9ZZX7 96 aa-1.01□□□□□ -2.57
RPF1YHR088W DNF3Q12674 1656 aa-1.01□□□□□ -2.57
RPF1YHR088W TY1B-DR5P0C2I2 1755 aa-1.01□□□□□ -2.57
RPF1YHR088W TY1B-DR6P0C2I3 1755 aa-1.01□□□□□ -2.57
RPF1YHR088W TY1B-LR2P0C2I5 1755 aa-1.01□□□□□ -2.57
RPF1YHR088W TY1B-PR1P0C2I9 1755 aaKnown RBP-1.01□□□□□ -2.57
RPF1YHR088W TY1B-PR2P0C2J0 1756 aa-1.01□□□□□ -2.57
RPF1YHR088W TY1B-JR1P47098 1755 aa-1.01□□□□□ -2.57
RPF1YHR088W TY1B-JR2P47100 1755 aaKnown RBP-1.01□□□□□ -2.57
Retrieved 100 of 5,963 RNA–protein pairs in 105.5 ms