RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W DPP1Q05521 289 aa4.83□□□□□ -1.64
NUP49YGL172W ATP16Q12165 160 aa4.83□□□□□ -1.64
NUP49YGL172W SSS1P35179 80 aa4.82□□□□□ -1.64
NUP49YGL172W YIL059CP40520 121 aa4.82□□□□□ -1.64
NUP49YGL172W SPC1P46965 94 aa4.82□□□□□ -1.64
NUP49YGL172W YGL088WP53151 121 aa4.82□□□□□ -1.64
NUP49YGL172W LSO2Q3E772 92 aaKnown RBP4.82□□□□□ -1.64
NUP49YGL172W CDC43P18898 376 aa4.81□□□□□ -1.64
NUP49YGL172W RPL16AP26784 199 aaKnown RBP4.81□□□□□ -1.64
NUP49YGL172W ARC15P40518 154 aaRIP-Chip data4.81□□□□□ -1.64not detected
NUP49YGL172W ERI1P62651 68 aaKnown RBP4.81□□□□□ -1.64
NUP49YGL172W FCF1Q05498 189 aaPredicted RBP4.81□□□□□ -1.64
NUP49YGL172W ADH2P00331 348 aaKnown RBP4.8□□□□□ -1.64
NUP49YGL172W TOS6P48560 102 aa4.8□□□□□ -1.64
NUP49YGL172W ERV14P53173 138 aa4.8□□□□□ -1.64
NUP49YGL172W CUE4Q04201 117 aaPredicted RBP4.8□□□□□ -1.64
NUP49YGL172W SEN15Q04675 128 aa4.8□□□□□ -1.64
NUP49YGL172W YOR008C-AQ3E7B9 74 aa4.8□□□□□ -1.64
NUP49YGL172W YMR122W-AQ3E842 84 aa4.8□□□□□ -1.64
NUP49YGL172W MRP49P32388 137 aa4.8□□□□□ -1.64
NUP49YGL172W AIM29P36154 155 aa4.8□□□□□ -1.64
NUP49YGL172W OST3P48439 350 aa4.8□□□□□ -1.64
NUP49YGL172W PBA1Q05778 276 aa4.8□□□□□ -1.64
NUP49YGL172W HTL1Q9URQ5 78 aa4.8□□□□□ -1.64
NUP49YGL172W HMRA2P0CY13 119 aa4.79□□□□□ -1.64
NUP49YGL172W YER085CP40058 173 aa4.79□□□□□ -1.64
NUP49YGL172W YJL028WP47062 111 aa4.79□□□□□ -1.64
NUP49YGL172W YJR146WP47174 117 aa4.79□□□□□ -1.64
NUP49YGL172W POP3P53833 195 aaPredicted RBP4.79□□□□□ -1.64
NUP49YGL172W RPL33AP05744 107 aaKnown RBP4.78□□□□□ -1.64
NUP49YGL172W RPL33BP41056 107 aaKnown RBP4.78□□□□□ -1.64
NUP49YGL172W YDR042CQ03205 200 aa4.78□□□□□ -1.64
NUP49YGL172W PKR1Q03880 122 aaKnown RBP4.78□□□□□ -1.64
NUP49YGL172W YLL066W-BQ8TGJ7 56 aa4.78□□□□□ -1.64
NUP49YGL172W TRP1P00912 224 aa4.77□□□□□ -1.65
NUP49YGL172W MRPL11P36521 249 aaPredicted RBP4.77□□□□□ -1.65
NUP49YGL172W SVP26P38869 228 aa4.77□□□□□ -1.65
NUP49YGL172W YIL134C-AQ45U18 67 aa4.77□□□□□ -1.65
NUP49YGL172W RTC6O14464 93 aa4.76□□□□□ -1.65
NUP49YGL172W YPR195CQ06594 109 aa4.76□□□□□ -1.65
NUP49YGL172W YCL021W-AQ96VH3 125 aa4.76□□□□□ -1.65
NUP49YGL172W RPL27BP0C2H7 136 aaKnown RBP4.75□□□□□ -1.65
NUP49YGL172W RPL18AP0CX49 186 aaKnown RBP4.75□□□□□ -1.65
NUP49YGL172W RPL18BP0CX50 186 aaKnown RBP4.75□□□□□ -1.65
NUP49YGL172W FYV4P38783 130 aaPredicted RBP4.75□□□□□ -1.65
NUP49YGL172W YEL008WP40001 126 aa4.75□□□□□ -1.65
NUP49YGL172W YMR320WQ04897 101 aa4.75□□□□□ -1.65
NUP49YGL172W YLR112WQ12130 139 aa4.75□□□□□ -1.65
NUP49YGL172W COA3Q3E7B2 85 aa4.75□□□□□ -1.65
NUP49YGL172W RRT15Q3E811 62 aa4.75□□□□□ -1.65
NUP49YGL172W YPR010C-AA5Z2X5 72 aa4.74□□□□□ -1.65
NUP49YGL172W YMR103CQ04436 120 aa4.74□□□□□ -1.65
NUP49YGL172W TPT1Q12272 230 aaKnown RBP4.74□□□□□ -1.65
NUP49YGL172W YCR007CP25354 239 aa4.73□□□□□ -1.65
NUP49YGL172W APS1P35181 156 aa4.73□□□□□ -1.65
NUP49YGL172W PAU16P35994 123 aa4.73□□□□□ -1.65
NUP49YGL172W ERG28P40030 148 aa4.73□□□□□ -1.65
NUP49YGL172W YDR115WQ04598 105 aa4.73□□□□□ -1.65
NUP49YGL172W RPL31AP0C2H8 113 aaKnown RBP4.72□□□□□ -1.65
NUP49YGL172W COA6Q3E846 104 aa4.72□□□□□ -1.65
NUP49YGL172W SCS22Q6Q595 175 aa4.72□□□□□ -1.65
NUP49YGL172W ATP15P21306 62 aa4.72□□□□□ -1.65
NUP49YGL172W CNL1Q06333 122 aa4.72□□□□□ -1.65
NUP49YGL172W YBR219CP38317 127 aa4.71□□□□□ -1.66
NUP49YGL172W CIN5P40917 295 aa4.71□□□□□ -1.66
NUP49YGL172W ENV10Q99382 181 aa4.71□□□□□ -1.66
NUP49YGL172W ANB1P19211 157 aa4.7□□□□□ -1.66
NUP49YGL172W YMR295CQ03559 197 aa4.7□□□□□ -1.66
NUP49YGL172W YLR050CQ12155 161 aaKnown RBP4.7□□□□□ -1.66
NUP49YGL172W YAR029WP39549 74 aa4.69□□□□□ -1.66
NUP49YGL172W YAL064WP39711 94 aa4.69□□□□□ -1.66
NUP49YGL172W YAR023CD6VPM8 179 aa4.68□□□□□ -1.66
NUP49YGL172W HAC1P41546 238 aa4.68□□□□□ -1.66
NUP49YGL172W YPL261CQ08976 102 aa4.68□□□□□ -1.66
NUP49YGL172W DFM1Q12743 341 aaKnown RBP4.68□□□□□ -1.66
NUP49YGL172W SEC11P15367 167 aa4.67□□□□□ -1.66
NUP49YGL172W TOA2P32774 122 aa4.67□□□□□ -1.66
NUP49YGL172W HOT13P36078 116 aa4.67□□□□□ -1.66
NUP49YGL172W YBL081WP38180 368 aaKnown RBP4.67□□□□□ -1.66
NUP49YGL172W RPC10P40422 70 aa4.67□□□□□ -1.66
NUP49YGL172W AIM11P87275 137 aa4.67□□□□□ -1.66
NUP49YGL172W BET5Q03630 159 aa4.67□□□□□ -1.66
NUP49YGL172W YLR194CQ05777 254 aa4.67□□□□□ -1.66
NUP49YGL172W GAT4P40569 121 aa4.66□□□□□ -1.66
NUP49YGL172W YDL022C-AP0C5L6 82 aa4.65□□□□□ -1.66
NUP49YGL172W YGL230CP53074 147 aa4.65□□□□□ -1.66
NUP49YGL172W YMR175W-AQ3E766 64 aa4.65□□□□□ -1.66
NUP49YGL172W FUN14P18411 198 aa4.64□□□□□ -1.67
NUP49YGL172W MRPL44P19956 98 aa4.64□□□□□ -1.67
NUP49YGL172W SHU1P38751 150 aa4.64□□□□□ -1.67
NUP49YGL172W MSL1P40567 111 aaPredicted RBP4.64□□□□□ -1.67
NUP49YGL172W YKR041WP36134 250 aa4.63□□□□□ -1.67
NUP49YGL172W LCL2Q08045 131 aa4.63□□□□□ -1.67
NUP49YGL172W YAL065CO13511 128 aa4.63□□□□□ -1.67
NUP49YGL172W YDR034C-AP0C289 58 aa4.63□□□□□ -1.67
NUP49YGL172W YKL044WP36092 106 aa4.63□□□□□ -1.67
NUP49YGL172W PEX17P40155 199 aa4.63□□□□□ -1.67
NUP49YGL172W SNA2P56508 79 aa4.63□□□□□ -1.67
NUP49YGL172W NAT5Q08689 176 aa4.63□□□□□ -1.67
NUP49YGL172W YDL157CQ12082 118 aa4.63□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms