RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeast

Gene PRE4, Length 801 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRE4	YFR050C	YGR042W	P53227	271 aa		0.46	□□□□□ -2.34
PRE4	YFR050C	YNL033W	P53964	284 aa		0.46	□□□□□ -2.34
PRE4	YFR050C	YNL019C	P53975	284 aa		0.46	□□□□□ -2.34
PRE4	YFR050C	SDH7	Q04401	133 aa		0.46	□□□□□ -2.34
PRE4	YFR050C	NSL1	Q12143	216 aa		0.46	□□□□□ -2.34
PRE4	YFR050C	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.46	□□□□□ -2.34
PRE4	YFR050C	YPR014C	Q6B0W2	109 aa		0.46	□□□□□ -2.34
PRE4	YFR050C	COX8	P04039	78 aa		0.45	□□□□□ -2.34
PRE4	YFR050C	SFK1	P35735	353 aa		0.45	□□□□□ -2.34
PRE4	YFR050C	HPA3	P39979	161 aa		0.45	□□□□□ -2.34
PRE4	YFR050C	YEL008W	P40001	126 aa		0.45	□□□□□ -2.34
PRE4	YFR050C	CWP2	P43497	92 aa		0.45	□□□□□ -2.34
PRE4	YFR050C	DAD4	P69851	72 aa		0.45	□□□□□ -2.34
PRE4	YFR050C	YBR200W-A	Q3E755	54 aa		0.45	□□□□□ -2.34
PRE4	YFR050C	HTB2	P02294	131 aa		0.44	□□□□□ -2.34
PRE4	YFR050C	LSM2	P38203	95 aa	Known RBP	0.44	□□□□□ -2.34
PRE4	YFR050C	YBR032W	P38223	100 aa		0.44	□□□□□ -2.34
PRE4	YFR050C	HPM1	P40481	377 aa		0.44	□□□□□ -2.34
PRE4	YFR050C	SER2	P42941	309 aa		0.44	□□□□□ -2.34
PRE4	YFR050C	PAM16	P42949	149 aa		0.44	□□□□□ -2.34
PRE4	YFR050C	UBC12	P52491	188 aa		0.44	□□□□□ -2.34
PRE4	YFR050C	YGL193C	P53097	103 aa		0.44	□□□□□ -2.34
PRE4	YFR050C	PLP1	Q04004	230 aa		0.44	□□□□□ -2.34
PRE4	YFR050C	SHH3	Q04487	196 aa		0.44	□□□□□ -2.34
PRE4	YFR050C	MBF1	O14467	151 aa	Known RBP	0.43	□□□□□ -2.34
PRE4	YFR050C	GSP2	P32836	220 aa	Known RBP	0.43	□□□□□ -2.34
PRE4	YFR050C	SHG1	P38337	142 aa		0.43	□□□□□ -2.34
PRE4	YFR050C	YHL005C	P38752	130 aa		0.43	□□□□□ -2.34
PRE4	YFR050C	SKI6	P46948	246 aa	Predicted RBP	0.43	□□□□□ -2.34
PRE4	YFR050C	SPG1	P50088	95 aa		0.43	□□□□□ -2.34
PRE4	YFR050C	JAC1	P53193	184 aa		0.43	□□□□□ -2.34
PRE4	YFR050C	ORM1	P53224	222 aa		0.43	□□□□□ -2.34
PRE4	YFR050C	YMR082C	Q04276	118 aa		0.43	□□□□□ -2.34
PRE4	YFR050C	YOL014W	Q08110	124 aa		0.43	□□□□□ -2.34
PRE4	YFR050C	ADF1	Q2V2Q1	113 aa		0.43	□□□□□ -2.34
PRE4	YFR050C	COA3	Q3E7B2	85 aa		0.43	□□□□□ -2.34
PRE4	YFR050C	YML100W-A	Q8TGT0	57 aa		0.43	□□□□□ -2.34
PRE4	YFR050C	SPS2	P08459	502 aa		0.42	□□□□□ -2.34
PRE4	YFR050C	CNB1	P25296	175 aa		0.42	□□□□□ -2.34
PRE4	YFR050C	SHB17	P36136	271 aa	Known RBP	0.42	□□□□□ -2.34
PRE4	YFR050C	PAM17	P36147	197 aa		0.42	□□□□□ -2.34
PRE4	YFR050C	GPI14	P47088	403 aa	Known RBP	0.42	□□□□□ -2.34
PRE4	YFR050C	FRQ1	Q06389	190 aa		0.42	□□□□□ -2.34
PRE4	YFR050C	YOR015W	Q12169	119 aa		0.42	□□□□□ -2.34
PRE4	YFR050C	YLR412C-A	Q3E742	68 aa		0.42	□□□□□ -2.34
PRE4	YFR050C	COX9	P07255	59 aa		0.41	□□□□□ -2.34
PRE4	YFR050C	PRE1	P22141	198 aa	Known RBP	0.41	□□□□□ -2.34
PRE4	YFR050C	AHT1	P29589	182 aa		0.41	□□□□□ -2.34
PRE4	YFR050C	SFT2	P38166	215 aa		0.41	□□□□□ -2.34
PRE4	YFR050C	YIL102C	P40488	101 aa		0.41	□□□□□ -2.34
PRE4	YFR050C	YFL019C	P43576	117 aa		0.41	□□□□□ -2.34
PRE4	YFR050C	THG1	P53215	237 aa	Known RBP	0.41	□□□□□ -2.34
PRE4	YFR050C	GIM3	P53900	129 aa		0.41	□□□□□ -2.34
PRE4	YFR050C	PMP3	P87284	55 aa		0.41	□□□□□ -2.34
PRE4	YFR050C	VPS28	Q02767	242 aa		0.41	□□□□□ -2.34
PRE4	YFR050C	IGO2	Q9P305	131 aa		0.41	□□□□□ -2.34
PRE4	YFR050C	FMP49	A0A023PZB3	126 aa		0.4	□□□□□ -2.35
PRE4	YFR050C	ARG80	P07249	177 aa		0.4	□□□□□ -2.35
PRE4	YFR050C	MRS1	P07266	363 aa		0.4	□□□□□ -2.35
PRE4	YFR050C	UBC8	P28263	218 aa		0.4	□□□□□ -2.35
PRE4	YFR050C	YJR111C	P47148	283 aa	Known RBP	0.4	□□□□□ -2.35
PRE4	YFR050C	YNL184C	P53876	108 aa		0.4	□□□□□ -2.35
PRE4	YFR050C	TMA20	P89886	181 aa	Predicted RBP	0.4	□□□□□ -2.35
PRE4	YFR050C	SHH4	Q06236	168 aa		0.4	□□□□□ -2.35
PRE4	YFR050C	RAD6	P06104	172 aa		0.39	□□□□□ -2.35
PRE4	YFR050C	IDP1	P21954	428 aa	Known RBP	0.39	□□□□□ -2.35
PRE4	YFR050C	FPR2	P32472	135 aa		0.39	□□□□□ -2.35
PRE4	YFR050C	SEC72	P39742	193 aa	Known RBP	0.39	□□□□□ -2.35
PRE4	YFR050C	SPC25	P40014	221 aa		0.39	□□□□□ -2.35
PRE4	YFR050C	YML079W	Q03629	201 aa		0.39	□□□□□ -2.35
PRE4	YFR050C	POC4	Q12245	148 aa	Predicted RBP	0.39	□□□□□ -2.35
PRE4	YFR050C	QCR7	P00128	127 aa		0.38	□□□□□ -2.35
PRE4	YFR050C	COX7	P10174	60 aa		0.38	□□□□□ -2.35
PRE4	YFR050C	ATP7	P30902	174 aa		0.38	□□□□□ -2.35
PRE4	YFR050C	YAR064W	P39563	99 aa		0.38	□□□□□ -2.35
PRE4	YFR050C	TIM11	P81449	96 aa	Predicted RBP	0.38	□□□□□ -2.35
PRE4	YFR050C	ATP19	P81451	68 aa		0.38	□□□□□ -2.35
PRE4	YFR050C	MAK3	Q03503	176 aa		0.38	□□□□□ -2.35
PRE4	YFR050C	YOR072W	Q08486	104 aa		0.38	□□□□□ -2.35
PRE4	YFR050C	YDL157C	Q12082	118 aa		0.38	□□□□□ -2.35
PRE4	YFR050C	RDI1	Q12434	202 aa		0.38	□□□□□ -2.35
PRE4	YFR050C	AHC2	P25649	128 aa		0.37	□□□□□ -2.35
PRE4	YFR050C	YBR242W	P38331	238 aa		0.37	□□□□□ -2.35
PRE4	YFR050C	SBH1	P52870	82 aa		0.37	□□□□□ -2.35
PRE4	YFR050C	PAU12	P53343	120 aa		0.37	□□□□□ -2.35
PRE4	YFR050C	YPR203W	Q08994	102 aa		0.37	□□□□□ -2.35
PRE4	YFR050C	ATG41	Q12048	136 aa		0.37	□□□□□ -2.35
PRE4	YFR050C	YLR050C	Q12155	161 aa	Known RBP	0.37	□□□□□ -2.35
PRE4	YFR050C	Q0032	Q9ZZX7	96 aa		0.37	□□□□□ -2.35
PRE4	YFR050C	RPS25B	P0C0T4	108 aa	Known RBP	0.36	□□□□□ -2.35
PRE4	YFR050C	EGD2	P38879	174 aa	Known RBP	0.36	□□□□□ -2.35
PRE4	YFR050C	NVJ1	P38881	321 aa		0.36	□□□□□ -2.35
PRE4	YFR050C	YGR269W	P40326	108 aa		0.36	□□□□□ -2.35
PRE4	YFR050C	NAT3	Q06504	195 aa		0.36	□□□□□ -2.35
PRE4	YFR050C	RPS25A	Q3E792	108 aa	Predicted RBP	0.36	□□□□□ -2.35
PRE4	YFR050C	YGR121W-A	Q3E816	71 aa		0.36	□□□□□ -2.35
PRE4	YFR050C	PBI2	P0CT04	75 aa	Known RBP	0.35	□□□□□ -2.35
PRE4	YFR050C	MRP49	P32388	137 aa		0.35	□□□□□ -2.35
PRE4	YFR050C	YKR070W	P36151	352 aa	Known RBP	0.35	□□□□□ -2.35
PRE4	YFR050C	PAU24	P38155	120 aa		0.35	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms