RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	YCR023C	P25351	611 aa		0.96	□□□□□ -2.26
DOT6	YER088C	PAM17	P36147	197 aa		0.96	□□□□□ -2.26
DOT6	YER088C	SLM6	P38343	150 aa		0.96	□□□□□ -2.26
DOT6	YER088C	MPC3	P53311	146 aa		0.96	□□□□□ -2.26
DOT6	YER088C	DYN2	Q02647	92 aa		0.96	□□□□□ -2.26
DOT6	YER088C	RAV2	Q03956	351 aa		0.96	□□□□□ -2.26
DOT6	YER088C	KEI1	Q06346	221 aa		0.96	□□□□□ -2.26
DOT6	YER088C	YOR385W	Q08909	290 aa		0.96	□□□□□ -2.26
DOT6	YER088C	ATG41	Q12048	136 aa		0.96	□□□□□ -2.26
DOT6	YER088C	YPR145C-A	Q2V2P0	78 aa		0.96	□□□□□ -2.26
DOT6	YER088C	VAR1	P02381	398 aa		0.95	□□□□□ -2.26
DOT6	YER088C	EMP24	P32803	203 aa	Known RBP	0.95	□□□□□ -2.26
DOT6	YER088C	YBR013C	P38215	129 aa		0.95	□□□□□ -2.26
DOT6	YER088C	SPI1	P40092	148 aa		0.95	□□□□□ -2.26
DOT6	YER088C	MOG1	P47123	218 aa		0.95	□□□□□ -2.26
DOT6	YER088C	VMA10	P48836	114 aa	Known RBP	0.95	□□□□□ -2.26
DOT6	YER088C	YGR025W	P53216	100 aa		0.95	□□□□□ -2.26
DOT6	YER088C	PKR1	Q03880	122 aa	Known RBP	0.95	□□□□□ -2.26
DOT6	YER088C	ANT1	Q06497	328 aa		0.95	□□□□□ -2.26
DOT6	YER088C	YPR010C-A	A5Z2X5	72 aa		0.94	□□□□□ -2.26
DOT6	YER088C	RPL33A	P05744	107 aa	Known RBP	0.94	□□□□□ -2.26
DOT6	YER088C	UBI4	P0CG63	381 aa	Known RBP	0.94	□□□□□ -2.26
DOT6	YER088C	SEC11	P15367	167 aa		0.94	□□□□□ -2.26
DOT6	YER088C	KNH1	P50112	268 aa		0.94	□□□□□ -2.26
DOT6	YER088C	YLR307C-A	Q3E825	87 aa		0.94	□□□□□ -2.26
DOT6	YER088C	ATP5	P09457	212 aa		0.94	□□□□□ -2.26
DOT6	YER088C	MRP17	P28778	131 aa		0.94	□□□□□ -2.26
DOT6	YER088C	SFT2	P38166	215 aa		0.94	□□□□□ -2.26
DOT6	YER088C	FYV4	P38783	130 aa	Predicted RBP	0.94	□□□□□ -2.26
DOT6	YER088C	EMC5	P40540	141 aa		0.94	□□□□□ -2.26
DOT6	YER088C	POP3	P53833	195 aa	Predicted RBP	0.94	□□□□□ -2.26
DOT6	YER088C	TMA23	Q03525	211 aa		0.94	□□□□□ -2.26
DOT6	YER088C	YOR015W	Q12169	119 aa		0.94	□□□□□ -2.26
DOT6	YER088C	ATP20	Q12233	115 aa		0.94	□□□□□ -2.26
DOT6	YER088C	YDR010C	Q12426	110 aa		0.94	□□□□□ -2.26
DOT6	YER088C	GSP2	P32836	220 aa	Known RBP	0.93	□□□□□ -2.26
DOT6	YER088C	HTD2	P38790	280 aa	Known RBP	0.93	□□□□□ -2.26
DOT6	YER088C	YPL073C	P40323	161 aa		0.93	□□□□□ -2.26
DOT6	YER088C	BRP1	P53194	125 aa		0.93	□□□□□ -2.26
DOT6	YER088C	ERI1	P62651	68 aa	Known RBP	0.93	□□□□□ -2.26
DOT6	YER088C	YDR366C	P87287	132 aa		0.93	□□□□□ -2.26
DOT6	YER088C	YHR007C-A	Q07074	71 aa		0.93	□□□□□ -2.26
DOT6	YER088C	FYV12	Q08559	129 aa		0.93	□□□□□ -2.26
DOT6	YER088C	IPI1	P38803	334 aa	Predicted RBP	0.93	□□□□□ -2.26
DOT6	YER088C	RPL13B	P40212	199 aa	Known RBP	0.93	□□□□□ -2.26
DOT6	YER088C	YGL193C	P53097	103 aa		0.93	□□□□□ -2.26
DOT6	YER088C	RPL13A	Q12690	199 aa	Predicted RBP	0.93	□□□□□ -2.26
DOT6	YER088C	SHB17	P36136	271 aa	Known RBP	0.92	□□□□□ -2.26
DOT6	YER088C	POP7	P38291	140 aa		0.92	□□□□□ -2.26
DOT6	YER088C	SWM2	P40342	146 aa		0.92	□□□□□ -2.26
DOT6	YER088C	DAD4	P69851	72 aa		0.92	□□□□□ -2.26
DOT6	YER088C	LIP1	Q03579	150 aa		0.92	□□□□□ -2.26
DOT6	YER088C	UPS3	Q04006	179 aa		0.92	□□□□□ -2.26
DOT6	YER088C	POC4	Q12245	148 aa	Predicted RBP	0.92	□□□□□ -2.26
DOT6	YER088C	CMC4	Q3E7A9	73 aa		0.92	□□□□□ -2.26
DOT6	YER088C	RRT15	Q3E811	62 aa		0.92	□□□□□ -2.26
DOT6	YER088C	RPS25B	P0C0T4	108 aa	Known RBP	0.91	□□□□□ -2.26
DOT6	YER088C	HYP2	P23301	157 aa	Known RBP	0.91	□□□□□ -2.26
DOT6	YER088C	RBL2	P48606	106 aa	Known RBP	0.91	□□□□□ -2.26
DOT6	YER088C	MIC27	P50945	234 aa		0.91	□□□□□ -2.26
DOT6	YER088C	YLR194C	Q05777	254 aa		0.91	□□□□□ -2.26
DOT6	YER088C	RPS25A	Q3E792	108 aa	Predicted RBP	0.91	□□□□□ -2.26
DOT6	YER088C	SUS1	Q6WNK7	96 aa		0.91	□□□□□ -2.26
DOT6	YER088C	COX8	P04039	78 aa		0.91	□□□□□ -2.26
DOT6	YER088C	LSM2	P38203	95 aa	Known RBP	0.91	□□□□□ -2.26
DOT6	YER088C	YHL018W	P38744	120 aa	Predicted RBP	0.91	□□□□□ -2.26
DOT6	YER088C	YER181C	P40097	107 aa		0.91	□□□□□ -2.26
DOT6	YER088C	THG1	P53215	237 aa	Known RBP	0.91	□□□□□ -2.26
DOT6	YER088C	HHO1	P53551	258 aa		0.91	□□□□□ -2.26
DOT6	YER088C	YML079W	Q03629	201 aa		0.91	□□□□□ -2.26
DOT6	YER088C	YMR320W	Q04897	101 aa		0.91	□□□□□ -2.26
DOT6	YER088C	YDR029W	Q12111	104 aa		0.91	□□□□□ -2.26
DOT6	YER088C	YOR381W-A	Q3E804	55 aa		0.91	□□□□□ -2.26
DOT6	YER088C	YMR122W-A	Q3E842	84 aa		0.91	□□□□□ -2.26
DOT6	YER088C	DDR48	P18899	430 aa	Known RBP	0.9	□□□□□ -2.27
DOT6	YER088C	ACP1	P32463	125 aa		0.9	□□□□□ -2.27
DOT6	YER088C	YGR269W	P40326	108 aa		0.9	□□□□□ -2.27
DOT6	YER088C	NSE4	P43124	402 aa		0.9	□□□□□ -2.27
DOT6	YER088C	YMR090W	Q04304	227 aa	Known RBP	0.9	□□□□□ -2.27
DOT6	YER088C	RRT7	Q07829	113 aa		0.9	□□□□□ -2.27
DOT6	YER088C	YBR200W-A	Q3E755	54 aa		0.9	□□□□□ -2.27
DOT6	YER088C	YHR213W-A	Q8TGT4	77 aa		0.9	□□□□□ -2.27
DOT6	YER088C	UBC5	P15732	148 aa		0.89	□□□□□ -2.27
DOT6	YER088C	MRP49	P32388	137 aa		0.89	□□□□□ -2.27
DOT6	YER088C	AIM19	P40502	157 aa		0.89	□□□□□ -2.27
DOT6	YER088C	ATP19	P81451	68 aa		0.89	□□□□□ -2.27
DOT6	YER088C	FIT2	Q08906	153 aa		0.89	□□□□□ -2.27
DOT6	YER088C	YLR342W-A	Q3E810	57 aa		0.89	□□□□□ -2.27
DOT6	YER088C	COA2	Q3E823	68 aa		0.89	□□□□□ -2.27
DOT6	YER088C	QCR8	P08525	94 aa		0.89	□□□□□ -2.27
DOT6	YER088C	HSP12	P22943	109 aa	Known RBP	0.89	□□□□□ -2.27
DOT6	YER088C	SRP21	P32342	167 aa		0.89	□□□□□ -2.27
DOT6	YER088C	RPL14A	P36105	138 aa	Known RBP	0.89	□□□□□ -2.27
DOT6	YER088C	RPL14B	P38754	138 aa	Known RBP	0.89	□□□□□ -2.27
DOT6	YER088C	YGR039W	P53225	103 aa		0.89	□□□□□ -2.27
DOT6	YER088C	COF1	Q03048	143 aa	Known RBP	0.89	□□□□□ -2.27
DOT6	YER088C	YMR082C	Q04276	118 aa		0.89	□□□□□ -2.27
DOT6	YER088C	SPS2	P08459	502 aa		0.88	□□□□□ -2.27
DOT6	YER088C	SEC59	P20048	519 aa		0.88	□□□□□ -2.27
DOT6	YER088C	MRPL24	P36525	258 aa	Predicted RBP	0.88	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms