RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W HMRA2P0CY13 119 aa3.21□□□□□ -1.9
HSP42YDR171W RRT1P38192 103 aa3.21□□□□□ -1.9
HSP42YDR171W YEL067CP39978 195 aa3.21□□□□□ -1.9
HSP42YDR171W SPI1P40092 148 aa3.21□□□□□ -1.9
HSP42YDR171W ECO1P43605 281 aa3.21□□□□□ -1.9
HSP42YDR171W FIP1P45976 327 aa3.21□□□□□ -1.9
HSP42YDR171W SKI6P46948 246 aaPredicted RBP3.21□□□□□ -1.9
HSP42YDR171W IMP2P46972 177 aa3.21□□□□□ -1.9
HSP42YDR171W LCB3P47013 409 aa3.21□□□□□ -1.9
HSP42YDR171W FCY1Q12178 158 aa3.21□□□□□ -1.9
HSP42YDR171W TIM22Q12328 207 aa3.21□□□□□ -1.9
HSP42YDR171W ENV10Q99382 181 aa3.21□□□□□ -1.9
HSP42YDR171W CCW14O13547 238 aa3.2□□□□□ -1.9
HSP42YDR171W Q0255P03881 472 aa3.2□□□□□ -1.9
HSP42YDR171W YHR213WP0CI67 198 aa3.2□□□□□ -1.9
HSP42YDR171W VMA11P32842 164 aa3.2□□□□□ -1.9
HSP42YDR171W MRPL49P40858 161 aaPredicted RBP3.2□□□□□ -1.9
HSP42YDR171W YFR057WP43625 151 aa3.2□□□□□ -1.9
HSP42YDR171W YLR194CQ05777 254 aa3.2□□□□□ -1.9
HSP42YDR171W RNH203Q12338 110 aa3.2□□□□□ -1.9
HSP42YDR171W YDR119W-AQ2V2P9 66 aa3.2□□□□□ -1.9
HSP42YDR171W YDL022C-AP0C5L6 82 aa3.19□□□□□ -1.9
HSP42YDR171W PHO85P17157 305 aa3.19□□□□□ -1.9
HSP42YDR171W KTI12P34253 313 aaKnown RBP3.19□□□□□ -1.9
HSP42YDR171W SIP18P50263 79 aa3.19□□□□□ -1.9
HSP42YDR171W YGR039WP53225 103 aa3.19□□□□□ -1.9
HSP42YDR171W YPL229WQ99395 206 aa3.19□□□□□ -1.9
HSP42YDR171W MIC12P38341 106 aa3.18□□□□□ -1.9
HSP42YDR171W YHL042WP38729 150 aa3.18□□□□□ -1.9
HSP42YDR171W GLE2P40066 365 aa3.18□□□□□ -1.9
HSP42YDR171W YIL059CP40520 121 aa3.18□□□□□ -1.9
HSP42YDR171W YCH1P42937 148 aa3.18□□□□□ -1.9
HSP42YDR171W CWP2P43497 92 aa3.18□□□□□ -1.9
HSP42YDR171W YFL051CP43552 160 aa3.18□□□□□ -1.9
HSP42YDR171W PIR5P46999 287 aa3.18□□□□□ -1.9
HSP42YDR171W SBH2P52871 88 aa3.18□□□□□ -1.9
HSP42YDR171W CAX4P53223 239 aa3.18□□□□□ -1.9
HSP42YDR171W AIM11P87275 137 aa3.18□□□□□ -1.9
HSP42YDR171W COF1Q03048 143 aaKnown RBP3.18□□□□□ -1.9
HSP42YDR171W YDR114CQ04597 100 aa3.18□□□□□ -1.9
HSP42YDR171W YOR008C-AQ3E7B9 74 aa3.18□□□□□ -1.9
HSP42YDR171W ECM12O13529 151 aa3.17□□□□□ -1.9
HSP42YDR171W YHR139C-AO13536 103 aa3.17□□□□□ -1.9
HSP42YDR171W MID2P36027 376 aa3.17□□□□□ -1.9
HSP42YDR171W NRG2P38082 220 aa3.17□□□□□ -1.9
HSP42YDR171W DSE2P38844 325 aa3.17□□□□□ -1.9
HSP42YDR171W VTC1P40046 129 aaRIP-Chip data3.17□□□□□ -1.9not detected
HSP42YDR171W YIA6P40556 373 aa3.17□□□□□ -1.9
HSP42YDR171W SHH4Q06236 168 aa3.17□□□□□ -1.9
HSP42YDR171W YBL112CQ3E7Y4 105 aa3.17□□□□□ -1.9
HSP42YDR171W TOM6P33448 61 aa3.16□□□□□ -1.9
HSP42YDR171W MIG3P39943 394 aa3.16□□□□□ -1.9
HSP42YDR171W PEX17P40155 199 aa3.16□□□□□ -1.9
HSP42YDR171W YJL027CP47063 138 aaPredicted RBP3.16□□□□□ -1.9
HSP42YDR171W VPS55P47111 140 aa3.16□□□□□ -1.9
HSP42YDR171W YDR381C-AQ3E6R5 114 aa3.16□□□□□ -1.9
HSP42YDR171W YMR105W-AQ8TGS8 64 aa3.16□□□□□ -1.9
HSP42YDR171W RPS23AP0CX29 145 aaKnown RBP3.15□□□□□ -1.91
HSP42YDR171W RPS23BP0CX30 145 aa3.15□□□□□ -1.91
HSP42YDR171W UBC5P15732 148 aa3.15□□□□□ -1.91
HSP42YDR171W UTH1P36135 365 aa3.15□□□□□ -1.91
HSP42YDR171W YKR045CP36138 183 aa3.15□□□□□ -1.91
HSP42YDR171W SMP1P38128 452 aa3.15□□□□□ -1.91
HSP42YDR171W AIM34Q03673 198 aa3.15□□□□□ -1.91
HSP42YDR171W YPL038W-AQ3E7B4 63 aa3.15□□□□□ -1.91
HSP42YDR171W YER039C-AP0CD97 72 aa3.14□□□□□ -1.91
HSP42YDR171W PBI2P0CT04 75 aaKnown RBP3.14□□□□□ -1.91
HSP42YDR171W INO2P26798 304 aa3.14□□□□□ -1.91
HSP42YDR171W AIM19P40502 157 aa3.14□□□□□ -1.91
HSP42YDR171W KNH1P50112 268 aa3.14□□□□□ -1.91
HSP42YDR171W HAL1Q01766 294 aa3.14□□□□□ -1.91
HSP42YDR171W YDR209CQ03480 137 aa3.14□□□□□ -1.91
HSP42YDR171W IRC23Q08416 157 aa3.14□□□□□ -1.91
HSP42YDR171W YDR029WQ12111 104 aa3.14□□□□□ -1.91
HSP42YDR171W RPL28P02406 149 aaKnown RBP3.13□□□□□ -1.91
HSP42YDR171W YBR121C-AP0C5L4 52 aa3.13□□□□□ -1.91
HSP42YDR171W ATP15P21306 62 aa3.13□□□□□ -1.91
HSP42YDR171W YER121WP40076 114 aa3.13□□□□□ -1.91
HSP42YDR171W DCV1P43595 202 aa3.13□□□□□ -1.91
HSP42YDR171W SBH1P52870 82 aa3.13□□□□□ -1.91
HSP42YDR171W YGR219WP53307 113 aa3.13□□□□□ -1.91
HSP42YDR171W MRPS12P53732 153 aa3.13□□□□□ -1.91
HSP42YDR171W GAT3Q07928 141 aa3.13□□□□□ -1.91
HSP42YDR171W YOR029WQ12243 111 aa3.13□□□□□ -1.91
HSP42YDR171W PRM7Q12459 698 aa3.13□□□□□ -1.91
HSP42YDR171W URA2P07259 2214 aaKnown RBP3.12□□□□□ -1.91
HSP42YDR171W RPL39P04650 51 aa3.12□□□□□ -1.91
HSP42YDR171W RPS28BP0C0X0 67 aaKnown RBP3.12□□□□□ -1.91
HSP42YDR171W RPL18AP0CX49 186 aaKnown RBP3.12□□□□□ -1.91
HSP42YDR171W RPL18BP0CX50 186 aaKnown RBP3.12□□□□□ -1.91
HSP42YDR171W MRPL38P35996 138 aaPredicted RBP3.12□□□□□ -1.91
HSP42YDR171W MSA2P36157 363 aa3.12□□□□□ -1.91
HSP42YDR171W MPC2P38857 129 aa3.12□□□□□ -1.91
HSP42YDR171W POR2P40478 281 aa3.12□□□□□ -1.91
HSP42YDR171W YJR146WP47174 117 aa3.12□□□□□ -1.91
HSP42YDR171W YOL160WQ08321 113 aa3.12□□□□□ -1.91
HSP42YDR171W EMC6Q12431 108 aa3.12□□□□□ -1.91
HSP42YDR171W RPS28AQ3E7X9 67 aaPredicted RBP3.12□□□□□ -1.91
HSP42YDR171W QCR8P08525 94 aa3.11□□□□□ -1.91
HSP42YDR171W RPL2AP0CX45 254 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms