RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	YHR214C-D	P0CX93	97 aa		3.17	□□□□□ -1.9
VMA1	YDL185W	YKR045C	P36138	183 aa		3.17	□□□□□ -1.9
VMA1	YDL185W	MTC6	P38849	526 aa		3.17	□□□□□ -1.9
VMA1	YDL185W	ALG13	P53178	202 aa		3.17	□□□□□ -1.9
VMA1	YDL185W	YLR342W-A	Q3E810	57 aa		3.17	□□□□□ -1.9
VMA1	YDL185W	CDC26	P14724	124 aa		3.17	□□□□□ -1.9
VMA1	YDL185W	INO2	P26798	304 aa		3.17	□□□□□ -1.9
VMA1	YDL185W	SBH1	P52870	82 aa		3.17	□□□□□ -1.9
VMA1	YDL185W	YMR181C	Q03231	154 aa		3.17	□□□□□ -1.9
VMA1	YDL185W	YLR194C	Q05777	254 aa		3.17	□□□□□ -1.9
VMA1	YDL185W	RRS1	Q08746	203 aa	Known RBP	3.17	□□□□□ -1.9
VMA1	YDL185W	RPL42A	P0CX27	106 aa	Known RBP	3.17	□□□□□ -1.9
VMA1	YDL185W	RPL42B	P0CX28	106 aa	Known RBP	3.17	□□□□□ -1.9
VMA1	YDL185W	MRPS12	P53732	153 aa		3.17	□□□□□ -1.9
VMA1	YDL185W	RPS14A	P06367	137 aa	Known RBP	3.16	□□□□□ -1.9
VMA1	YDL185W	RPS14B	P39516	138 aa	Known RBP	3.16	□□□□□ -1.9
VMA1	YDL185W	YNL190W	P53872	204 aa		3.16	□□□□□ -1.9
VMA1	YDL185W	PBI2	P0CT04	75 aa	Known RBP	3.16	□□□□□ -1.9
VMA1	YDL185W	YER084W	P40057	128 aa		3.16	□□□□□ -1.9
VMA1	YDL185W	YCR050C	P25630	102 aa		3.15	□□□□□ -1.9
VMA1	YDL185W	KTI12	P34253	313 aa	Known RBP	3.15	□□□□□ -1.9
VMA1	YDL185W	YOR029W	Q12243	111 aa		3.15	□□□□□ -1.9
VMA1	YDL185W	IES6	P32617	166 aa		3.15	□□□□□ -1.91
VMA1	YDL185W	SHH4	Q06236	168 aa		3.15	□□□□□ -1.91
VMA1	YDL185W	SVP26	P38869	228 aa		3.15	□□□□□ -1.91
VMA1	YDL185W	AIM19	P40502	157 aa		3.15	□□□□□ -1.91
VMA1	YDL185W	GLO1	P50107	326 aa		3.15	□□□□□ -1.91
VMA1	YDL185W	ATP15	P21306	62 aa		3.14	□□□□□ -1.91
VMA1	YDL185W	LDB16	P25587	256 aa		3.14	□□□□□ -1.91
VMA1	YDL185W	MRPL19	P53875	158 aa		3.14	□□□□□ -1.91
VMA1	YDL185W	YMR175W-A	Q3E766	64 aa		3.14	□□□□□ -1.91
VMA1	YDL185W	RPL28	P02406	149 aa	Known RBP	3.14	□□□□□ -1.91
VMA1	YDL185W	YHL018W	P38744	120 aa	Predicted RBP	3.14	□□□□□ -1.91
VMA1	YDL185W	YJL027C	P47063	138 aa	Predicted RBP	3.14	□□□□□ -1.91
VMA1	YDL185W	YDR209C	Q03480	137 aa		3.14	□□□□□ -1.91
VMA1	YDL185W	SIM1	P40472	476 aa		3.13	□□□□□ -1.91
VMA1	YDL185W	PIR5	P46999	287 aa		3.13	□□□□□ -1.91
VMA1	YDL185W	YOR008C-A	Q3E7B9	74 aa		3.13	□□□□□ -1.91
VMA1	YDL185W	YKL097C	P34245	136 aa		3.12	□□□□□ -1.91
VMA1	YDL185W	ADH5	P38113	351 aa	Known RBP	3.12	□□□□□ -1.91
VMA1	YDL185W	RRT13	P40042	185 aa		3.12	□□□□□ -1.91
VMA1	YDL185W	PBA1	Q05778	276 aa		3.12	□□□□□ -1.91
VMA1	YDL185W	YMR105W-A	Q8TGS8	64 aa		3.12	□□□□□ -1.91
VMA1	YDL185W	MSA2	P36157	363 aa		3.12	□□□□□ -1.91
VMA1	YDL185W	SEN1	Q00416	2231 aa	Known RBP	3.12	□□□□□ -1.91
VMA1	YDL185W	LTP1	P40347	161 aa		3.11	□□□□□ -1.91
VMA1	YDL185W	YLR042C	Q07990	161 aa		3.11	□□□□□ -1.91
VMA1	YDL185W	YOL160W	Q08321	113 aa		3.11	□□□□□ -1.91
VMA1	YDL185W	YDR246W-A	Q3E763	66 aa		3.11	□□□□□ -1.91
VMA1	YDL185W	KSH1	Q8TGJ3	72 aa		3.11	□□□□□ -1.91
VMA1	YDL185W	CCW14	O13547	238 aa		3.11	□□□□□ -1.91
VMA1	YDL185W	RPL18A	P0CX49	186 aa	Known RBP	3.11	□□□□□ -1.91
VMA1	YDL185W	RPL18B	P0CX50	186 aa	Known RBP	3.11	□□□□□ -1.91
VMA1	YDL185W	URM1	P40554	99 aa	Predicted RBP	3.11	□□□□□ -1.91
VMA1	YDL185W	KTI11	Q3E840	82 aa		3.11	□□□□□ -1.91
VMA1	YDL185W	TAO3	P40468	2376 aa		3.11	□□□□□ -1.91
VMA1	YDL185W	FAB1	P34756	2278 aa		3.11	□□□□□ -1.91
VMA1	YDL185W	RRT1	P38192	103 aa		3.1	□□□□□ -1.91
VMA1	YDL185W	YSY6	P38374	65 aa		3.1	□□□□□ -1.91
VMA1	YDL185W	MPC2	P38857	129 aa		3.1	□□□□□ -1.91
VMA1	YDL185W	YER187W	P40102	141 aa		3.1	□□□□□ -1.91
VMA1	YDL185W	YGR025W	P53216	100 aa		3.1	□□□□□ -1.91
VMA1	YDL185W	RNH203	Q12338	110 aa		3.1	□□□□□ -1.91
VMA1	YDL185W	TRP1	P00912	224 aa		3.1	□□□□□ -1.91
VMA1	YDL185W	PPT2	Q12036	173 aa		3.1	□□□□□ -1.91
VMA1	YDL185W	CSF1	Q12150	2958 aa		3.1	□□□□□ -1.91
VMA1	YDL185W	MRPL39	P36533	70 aa		3.1	□□□□□ -1.91
VMA1	YDL185W	DCV1	P43595	202 aa		3.1	□□□□□ -1.91
VMA1	YDL185W	YJR146W	P47174	117 aa		3.1	□□□□□ -1.91
VMA1	YDL185W	YNL234W	P53857	426 aa		3.1	□□□□□ -1.91
VMA1	YDL185W	YLR412C-A	Q3E742	68 aa		3.1	□□□□□ -1.91
VMA1	YDL185W	BPH1	P25356	2167 aa		3.09	□□□□□ -1.91
VMA1	YDL185W	YBR209W	P38311	105 aa		3.09	□□□□□ -1.91
VMA1	YDL185W	SIP18	P50263	79 aa		3.09	□□□□□ -1.91
VMA1	YDL185W	RPL16A	P26784	199 aa	Known RBP	3.09	□□□□□ -1.92
VMA1	YDL185W	YNL194C	P40169	301 aa		3.09	□□□□□ -1.92
VMA1	YDL185W	NRM1	P53718	249 aa		3.09	□□□□□ -1.92
VMA1	YDL185W	GAT3	Q07928	141 aa		3.09	□□□□□ -1.92
VMA1	YDL185W	EMC6	Q12431	108 aa		3.09	□□□□□ -1.92
VMA1	YDL185W	YBR182C-A	Q8TGU6	64 aa		3.09	□□□□□ -1.92
VMA1	YDL185W	RPL39	P04650	51 aa		3.08	□□□□□ -1.92
VMA1	YDL185W	KRE9	P39005	276 aa		3.08	□□□□□ -1.92
VMA1	YDL185W	HUR1	P45820	110 aa		3.08	□□□□□ -1.92
VMA1	YDL185W	YMR320W	Q04897	101 aa		3.08	□□□□□ -1.92
VMA1	YDL185W	YOR032W-A	Q8TGS1	66 aa		3.08	□□□□□ -1.92
VMA1	YDL185W	SHU1	P38751	150 aa		3.08	□□□□□ -1.92
VMA1	YDL185W	PEX17	P40155	199 aa		3.08	□□□□□ -1.92
VMA1	YDL185W	DAP1	Q12091	152 aa		3.08	□□□□□ -1.92
VMA1	YDL185W	RPL15A	P05748	204 aa	Known RBP	3.07	□□□□□ -1.92
VMA1	YDL185W	YGR164W	P53291	111 aa		3.07	□□□□□ -1.92
VMA1	YDL185W	YML122C	Q03207	126 aa		3.07	□□□□□ -1.92
VMA1	YDL185W	YOL085C	Q99345	113 aa		3.07	□□□□□ -1.92
VMA1	YDL185W	UBC4	P15731	148 aa		3.07	□□□□□ -1.92
VMA1	YDL185W	RPL16B	P26785	198 aa	Known RBP	3.07	□□□□□ -1.92
VMA1	YDL185W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	3.07	□□□□□ -1.92	not detected
VMA1	YDL185W	HAL1	Q01766	294 aa		3.07	□□□□□ -1.92
VMA1	YDL185W	YOR034C-A	Q3E735	80 aa		3.06	□□□□□ -1.92
VMA1	YDL185W	TRA1	P38811	3744 aa		3.06	□□□□□ -1.92
VMA1	YDL185W	CTR2	P38865	189 aa		3.06	□□□□□ -1.92
VMA1	YDL185W	MIG3	P39943	394 aa		3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 63.9 ms