RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C KSH1Q8TGJ3 72 aa2.91□□□□□ -1.94
CDC9YDL164C GCV3P39726 170 aaPredicted RBP2.91□□□□□ -1.94
CDC9YDL164C SNU13P39990 126 aaKnown RBP2.91□□□□□ -1.94
CDC9YDL164C YLR365WQ7LIF2 110 aa2.91□□□□□ -1.94
CDC9YDL164C RTC6O14464 93 aa2.9□□□□□ -1.94
CDC9YDL164C PEX4P29340 183 aa2.9□□□□□ -1.94
CDC9YDL164C YKR045CP36138 183 aa2.9□□□□□ -1.94
CDC9YDL164C VMA21P41806 77 aa2.9□□□□□ -1.94
CDC9YDL164C AVO2Q04749 426 aa2.9□□□□□ -1.94
CDC9YDL164C ACC1Q00955 2233 aaKnown RBP2.9□□□□□ -1.95
CDC9YDL164C PRE1P22141 198 aaKnown RBP2.9□□□□□ -1.95
CDC9YDL164C PAU24P38155 120 aa2.9□□□□□ -1.95
CDC9YDL164C YGR269WP40326 108 aa2.9□□□□□ -1.95
CDC9YDL164C COA6Q3E846 104 aa2.9□□□□□ -1.95
CDC9YDL164C RDS3Q06835 107 aaPredicted RBP2.89□□□□□ -1.95
CDC9YDL164C LAA1P39526 2014 aa2.89□□□□□ -1.95
CDC9YDL164C YFL051CP43552 160 aa2.89□□□□□ -1.95
CDC9YDL164C CIS3P47001 227 aa2.89□□□□□ -1.95
CDC9YDL164C YGL149WP53116 101 aa2.89□□□□□ -1.95
CDC9YDL164C CYT2Q00873 224 aa2.89□□□□□ -1.95
CDC9YDL164C YIL014C-AQ02598 104 aa2.89□□□□□ -1.95
CDC9YDL164C NMA1Q06178 401 aaKnown RBP2.89□□□□□ -1.95
CDC9YDL164C YIL134C-AQ45U18 67 aa2.89□□□□□ -1.95
CDC9YDL164C IGO1P53897 168 aa2.88□□□□□ -1.95
CDC9YDL164C YNR034W-AQ3E841 98 aa2.88□□□□□ -1.95
CDC9YDL164C MRP17P28778 131 aa2.88□□□□□ -1.95
CDC9YDL164C PAU15P40585 124 aa2.88□□□□□ -1.95
CDC9YDL164C GSC2P40989 1895 aa2.87□□□□□ -1.95
CDC9YDL164C DCV1P43595 202 aa2.87□□□□□ -1.95
CDC9YDL164C FIT1Q04433 528 aa2.87□□□□□ -1.95
CDC9YDL164C PMD1P32634 1753 aa2.87□□□□□ -1.95
CDC9YDL164C SOD1P00445 154 aaKnown RBP2.86□□□□□ -1.95
CDC9YDL164C YML079WQ03629 201 aa2.86□□□□□ -1.95
CDC9YDL164C STT4P37297 1900 aa2.86□□□□□ -1.95
CDC9YDL164C EMC5P40540 141 aa2.86□□□□□ -1.95
CDC9YDL164C YGR164WP53291 111 aa2.86□□□□□ -1.95
CDC9YDL164C YPL067CQ02754 198 aa2.86□□□□□ -1.95
CDC9YDL164C YDR029WQ12111 104 aa2.86□□□□□ -1.95
CDC9YDL164C MDM35O60200 86 aa2.85□□□□□ -1.95
CDC9YDL164C PAU21P0CE86 164 aa2.85□□□□□ -1.95
CDC9YDL164C PAU22P0CE87 164 aa2.85□□□□□ -1.95
CDC9YDL164C HMRA1P0CY11 126 aa2.85□□□□□ -1.95
CDC9YDL164C UBC4P15731 148 aa2.85□□□□□ -1.95
CDC9YDL164C HSP150P32478 413 aa2.85□□□□□ -1.95
CDC9YDL164C MRPL11P36521 249 aaPredicted RBP2.85□□□□□ -1.95
CDC9YDL164C YGL010WP25338 174 aa2.85□□□□□ -1.95
CDC9YDL164C YBR209WP38311 105 aa2.85□□□□□ -1.95
CDC9YDL164C YMR090WQ04304 227 aaKnown RBP2.85□□□□□ -1.95
CDC9YDL164C RPS25BP0C0T4 108 aaKnown RBP2.84□□□□□ -1.95
CDC9YDL164C MRPS9P38120 278 aa2.84□□□□□ -1.95
CDC9YDL164C RSM19P53733 91 aaPredicted RBP2.84□□□□□ -1.95
CDC9YDL164C RPS25AQ3E792 108 aaPredicted RBP2.84□□□□□ -1.95
CDC9YDL164C SVP26P38869 228 aa2.84□□□□□ -1.96
CDC9YDL164C BRP1P53194 125 aa2.84□□□□□ -1.96
CDC9YDL164C PAU19P0CE85 124 aa2.83□□□□□ -1.96
CDC9YDL164C PAU3P25610 124 aa2.83□□□□□ -1.96
CDC9YDL164C ATP19P81451 68 aa2.83□□□□□ -1.96
CDC9YDL164C NAT5Q08689 176 aa2.83□□□□□ -1.96
CDC9YDL164C FIT3Q08907 204 aa2.83□□□□□ -1.96
CDC9YDL164C COX19Q3E731 98 aa2.83□□□□□ -1.96
CDC9YDL164C YER187WP40102 141 aa2.82□□□□□ -1.96
CDC9YDL164C RAF1Q06891 181 aa2.82□□□□□ -1.96
CDC9YDL164C FAB1P34756 2278 aa2.82□□□□□ -1.96
CDC9YDL164C YHR022CP38763 256 aa2.82□□□□□ -1.96
CDC9YDL164C HSP10P38910 106 aa2.81□□□□□ -1.96
CDC9YDL164C YLR194CQ05777 254 aa2.81□□□□□ -1.96
CDC9YDL164C YPR153WQ06537 140 aa2.81□□□□□ -1.96
CDC9YDL164C PAU23Q07987 124 aa2.81□□□□□ -1.96
CDC9YDL164C YPL261CQ08976 102 aa2.81□□□□□ -1.96
CDC9YDL164C PAU17Q12370 124 aa2.81□□□□□ -1.96
CDC9YDL164C PAU5P43575 122 aa2.81□□□□□ -1.96
CDC9YDL164C YEL014CP39999 101 aa2.8□□□□□ -1.96
CDC9YDL164C YJL144WP47009 104 aa2.8□□□□□ -1.96
CDC9YDL164C MET31Q03081 177 aa2.8□□□□□ -1.96
CDC9YDL164C YIR020CP40575 100 aa2.79□□□□□ -1.96
CDC9YDL164C YLR296WQ05898 108 aa2.79□□□□□ -1.96
CDC9YDL164C YDL157CQ12082 118 aa2.79□□□□□ -1.96
CDC9YDL164C YPR096CO13587 100 aa2.79□□□□□ -1.96
CDC9YDL164C COX23P38824 151 aa2.79□□□□□ -1.96
CDC9YDL164C YEL008WP40001 126 aa2.79□□□□□ -1.96
CDC9YDL164C YLR146W-AQ2V2P1 62 aa2.79□□□□□ -1.96
CDC9YDL164C COX9P07255 59 aa2.78□□□□□ -1.96
CDC9YDL164C LSM2P38203 95 aaKnown RBP2.78□□□□□ -1.96
CDC9YDL164C MSL1P40567 111 aaPredicted RBP2.78□□□□□ -1.96
CDC9YDL164C YMR082CQ04276 118 aa2.78□□□□□ -1.96
CDC9YDL164C CYR1P08678 2026 aaKnown RBP2.78□□□□□ -1.96
CDC9YDL164C PAI3P01094 68 aa2.77□□□□□ -1.97
CDC9YDL164C RPB7P34087 171 aa2.77□□□□□ -1.97
CDC9YDL164C YDR114CQ04597 100 aa2.77□□□□□ -1.97
CDC9YDL164C YOS1Q3E834 85 aa2.77□□□□□ -1.97
CDC9YDL164C RPL13BP40212 199 aaKnown RBP2.77□□□□□ -1.97
CDC9YDL164C FMT1P32785 401 aa2.76□□□□□ -1.97
CDC9YDL164C PAU16P35994 123 aa2.76□□□□□ -1.97
CDC9YDL164C DAD1Q12248 94 aa2.76□□□□□ -1.97
CDC9YDL164C EMC6Q12431 108 aa2.76□□□□□ -1.97
CDC9YDL164C YBR292CP38357 123 aa2.75□□□□□ -1.97
CDC9YDL164C OST5Q92316 86 aa2.75□□□□□ -1.97
CDC9YDL164C HUR1P45820 110 aa2.75□□□□□ -1.97
CDC9YDL164C AIM4P38305 123 aaPredicted RBP2.74□□□□□ -1.97
CDC9YDL164C TAR1Q8TGM6 124 aa2.74□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms