RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSH5	YDL154W	SSS1	P35179	80 aa		0.94	□□□□□ -2.26
MSH5	YDL154W	RPL14A	P36105	138 aa	Known RBP	0.94	□□□□□ -2.26
MSH5	YDL154W	YHL037C	P38733	133 aa		0.94	□□□□□ -2.26
MSH5	YDL154W	YHR130C	P38834	111 aa		0.94	□□□□□ -2.26
MSH5	YDL154W	GAT4	P40569	121 aa		0.94	□□□□□ -2.26
MSH5	YDL154W	VMA21	P41806	77 aa		0.94	□□□□□ -2.26
MSH5	YDL154W	POP3	P53833	195 aa	Predicted RBP	0.94	□□□□□ -2.26
MSH5	YDL154W	YDR029W	Q12111	104 aa		0.94	□□□□□ -2.26
MSH5	YDL154W	YKL065W-A	Q2V2P2	73 aa		0.94	□□□□□ -2.26
MSH5	YDL154W	YIL102C-A	Q2V2P5	75 aa		0.94	□□□□□ -2.26
MSH5	YDL154W	YMR175W-A	Q3E766	64 aa		0.94	□□□□□ -2.26
MSH5	YDL154W	YFL041W-A	Q3E817	63 aa		0.94	□□□□□ -2.26
MSH5	YDL154W	YNR034W-A	Q3E841	98 aa		0.94	□□□□□ -2.26
MSH5	YDL154W	RPS25B	P0C0T4	108 aa	Known RBP	0.94	□□□□□ -2.26
MSH5	YDL154W	RPL30	P14120	105 aa	Known RBP	0.94	□□□□□ -2.26
MSH5	YDL154W	SEC11	P15367	167 aa		0.94	□□□□□ -2.26
MSH5	YDL154W	ATP15	P21306	62 aa		0.94	□□□□□ -2.26
MSH5	YDL154W	SFK1	P35735	353 aa		0.94	□□□□□ -2.26
MSH5	YDL154W	YHL018W	P38744	120 aa	Predicted RBP	0.94	□□□□□ -2.26
MSH5	YDL154W	SPI1	P40092	148 aa		0.94	□□□□□ -2.26
MSH5	YDL154W	HUR1	P45820	110 aa		0.94	□□□□□ -2.26
MSH5	YDL154W	ARP3	P47117	449 aa	Known RBP	0.94	□□□□□ -2.26
MSH5	YDL154W	YNL184C	P53876	108 aa		0.94	□□□□□ -2.26
MSH5	YDL154W	RPS25A	Q3E792	108 aa	Predicted RBP	0.94	□□□□□ -2.26
MSH5	YDL154W	YOL162W	P0CF19	215 aa		0.93	□□□□□ -2.26
MSH5	YDL154W	AHT1	P29589	182 aa		0.93	□□□□□ -2.26
MSH5	YDL154W	NHP2	P32495	156 aa	Predicted RBP	0.93	□□□□□ -2.26
MSH5	YDL154W	SLM6	P38343	150 aa		0.93	□□□□□ -2.26
MSH5	YDL154W	PAM16	P42949	149 aa		0.93	□□□□□ -2.26
MSH5	YDL154W	BAT2	P47176	376 aa	Known RBP	0.93	□□□□□ -2.26
MSH5	YDL154W	BOL2	P53082	120 aa		0.93	□□□□□ -2.26
MSH5	YDL154W	MET31	Q03081	177 aa		0.93	□□□□□ -2.26
MSH5	YDL154W	YMR295C	Q03559	197 aa		0.93	□□□□□ -2.26
MSH5	YDL154W	FIT3	Q08907	204 aa		0.93	□□□□□ -2.26
MSH5	YDL154W	RPS22B	Q3E7Y3	130 aa	Known RBP	0.93	□□□□□ -2.26
MSH5	YDL154W	SCS22	Q6Q595	175 aa		0.93	□□□□□ -2.26
MSH5	YDL154W	ODC2	Q99297	307 aa		0.93	□□□□□ -2.26
MSH5	YDL154W	NSA2	P40078	261 aa	Known RBP	0.93	□□□□□ -2.26
MSH5	YDL154W	YJL218W	P40892	196 aa	Known RBP	0.93	□□□□□ -2.26
MSH5	YDL154W	SFT1	P43682	97 aa		0.93	□□□□□ -2.26
MSH5	YDL154W	VPS71	Q03433	280 aa		0.93	□□□□□ -2.26
MSH5	YDL154W	YOL118C	Q08259	102 aa		0.93	□□□□□ -2.26
MSH5	YDL154W	YOR343C	Q12484	108 aa		0.93	□□□□□ -2.26
MSH5	YDL154W	YPL038W-A	Q3E7B4	63 aa		0.93	□□□□□ -2.26
MSH5	YDL154W	YML100W-A	Q8TGT0	57 aa		0.93	□□□□□ -2.26
MSH5	YDL154W	TMA19	P35691	167 aa	Known RBP	0.92	□□□□□ -2.26
MSH5	YDL154W	YKR045C	P36138	183 aa		0.92	□□□□□ -2.26
MSH5	YDL154W	YBR219C	P38317	127 aa		0.92	□□□□□ -2.26
MSH5	YDL154W	YHR138C	P38841	114 aa	Predicted RBP	0.92	□□□□□ -2.26
MSH5	YDL154W	YER134C	P40081	178 aa		0.92	□□□□□ -2.26
MSH5	YDL154W	FLX1	P40464	311 aa		0.92	□□□□□ -2.26
MSH5	YDL154W	EMC5	P40540	141 aa		0.92	□□□□□ -2.26
MSH5	YDL154W	PAU5	P43575	122 aa		0.92	□□□□□ -2.26
MSH5	YDL154W	TIM8	P57744	87 aa		0.92	□□□□□ -2.26
MSH5	YDL154W	YMR103C	Q04436	120 aa		0.92	□□□□□ -2.26
MSH5	YDL154W	ANT1	Q06497	328 aa		0.92	□□□□□ -2.26
MSH5	YDL154W	GPI11	Q06636	219 aa		0.92	□□□□□ -2.26
MSH5	YDL154W	COX19	Q3E731	98 aa		0.92	□□□□□ -2.26
MSH5	YDL154W	PCC1	Q3E833	88 aa		0.92	□□□□□ -2.26
MSH5	YDL154W	ENV10	Q99382	181 aa		0.92	□□□□□ -2.26
MSH5	YDL154W	YLR236C	A0A023PZG4	107 aa		0.92	□□□□□ -2.26
MSH5	YDL154W	MRP17	P28778	131 aa		0.92	□□□□□ -2.26
MSH5	YDL154W	YKL044W	P36092	106 aa		0.92	□□□□□ -2.26
MSH5	YDL154W	PDX3	P38075	228 aa	Known RBP	0.92	□□□□□ -2.26
MSH5	YDL154W	HTD2	P38790	280 aa	Known RBP	0.92	□□□□□ -2.26
MSH5	YDL154W	YHR140W	P38842	239 aa		0.92	□□□□□ -2.26
MSH5	YDL154W	RPB11	P38902	120 aa		0.92	□□□□□ -2.26
MSH5	YDL154W	THG1	P53215	237 aa	Known RBP	0.92	□□□□□ -2.26
MSH5	YDL154W	YDR119W-A	Q2V2P9	66 aa		0.92	□□□□□ -2.26
MSH5	YDL154W	YMR030W-A	Q3E760	96 aa		0.92	□□□□□ -2.26
MSH5	YDL154W	YDR182W-A	Q3E796	67 aa		0.92	□□□□□ -2.26
MSH5	YDL154W	YAR023C	D6VPM8	179 aa		0.91	□□□□□ -2.26
MSH5	YDL154W	COX9	P07255	59 aa		0.91	□□□□□ -2.26
MSH5	YDL154W	QCR8	P08525	94 aa		0.91	□□□□□ -2.26
MSH5	YDL154W	YJL197C-A	P0C5P0	93 aa		0.91	□□□□□ -2.26
MSH5	YDL154W	CYB5	P40312	120 aa		0.91	□□□□□ -2.26
MSH5	YDL154W	GPI19	Q04082	140 aa		0.91	□□□□□ -2.26
MSH5	YDL154W	YDL157C	Q12082	118 aa		0.91	□□□□□ -2.26
MSH5	YDL154W	POC4	Q12245	148 aa	Predicted RBP	0.91	□□□□□ -2.26
MSH5	YDL154W	YPR145C-A	Q2V2P0	78 aa		0.91	□□□□□ -2.26
MSH5	YDL154W	YLR363W-A	Q3E747	85 aa		0.91	□□□□□ -2.26
MSH5	YDL154W	KSH1	Q8TGJ3	72 aa		0.91	□□□□□ -2.26
MSH5	YDL154W	PAM17	P36147	197 aa		0.91	□□□□□ -2.26
MSH5	YDL154W	YBR292C	P38357	123 aa		0.91	□□□□□ -2.26
MSH5	YDL154W	YHL042W	P38729	150 aa		0.91	□□□□□ -2.26
MSH5	YDL154W	KNH1	P50112	268 aa		0.91	□□□□□ -2.26
MSH5	YDL154W	UPS3	Q04006	179 aa		0.91	□□□□□ -2.26
MSH5	YDL154W	YMR252C	Q04814	134 aa		0.91	□□□□□ -2.26
MSH5	YDL154W	ELP6	Q04868	273 aa		0.91	□□□□□ -2.26
MSH5	YDL154W	YOL131W	Q08270	108 aa		0.91	□□□□□ -2.26
MSH5	YDL154W	YCL048W-A	Q2V2Q2	79 aa		0.91	□□□□□ -2.26
MSH5	YDL154W	CSH1	P38287	376 aa		0.9	□□□□□ -2.26
MSH5	YDL154W	CCS1	P40202	249 aa	Known RBP	0.9	□□□□□ -2.26
MSH5	YDL154W	YFR035C	P43608	114 aa		0.9	□□□□□ -2.26
MSH5	YDL154W	YIL014C-A	Q02598	104 aa		0.9	□□□□□ -2.26
MSH5	YDL154W	RIM9	Q04734	239 aa		0.9	□□□□□ -2.26
MSH5	YDL154W	HPA2	Q06592	156 aa		0.9	□□□□□ -2.26
MSH5	YDL154W	YHR007C-A	Q07074	71 aa		0.9	□□□□□ -2.26
MSH5	YDL154W	CSI2	Q08054	341 aa		0.9	□□□□□ -2.26
MSH5	YDL154W	MPD1	Q12404	318 aa	Known RBP	0.9	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms