RNA–Protein interactions for RNA: YDL130W

RPP1B, Transcript of Ribosomal protein P1 beta, yeastyeast

Gene RPP1B, Length 321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPP1BYDL130W PCL2P25693 308 aa10.77□□□□□ -0.69
RPP1BYDL130W YER085CP40058 173 aa10.76□□□□□ -0.69
RPP1BYDL130W YAR023CD6VPM8 179 aa10.75□□□□□ -0.69
RPP1BYDL130W BET5Q03630 159 aa10.75□□□□□ -0.69
RPP1BYDL130W PKR1Q03880 122 aaKnown RBP10.75□□□□□ -0.69
RPP1BYDL130W YCL021W-AQ96VH3 125 aa10.75□□□□□ -0.69
RPP1BYDL130W URM1P40554 99 aaPredicted RBP10.74□□□□□ -0.69
RPP1BYDL130W ERV14P53173 138 aa10.74□□□□□ -0.69
RPP1BYDL130W MED7Q08278 222 aa10.74□□□□□ -0.69
RPP1BYDL130W YPL229WQ99395 206 aa10.74□□□□□ -0.69
RPP1BYDL130W GSP1P32835 219 aaKnown RBP10.72□□□□□ -0.69
RPP1BYDL130W GSP2P32836 220 aaKnown RBP10.72□□□□□ -0.69
RPP1BYDL130W YEL008WP40001 126 aa10.72□□□□□ -0.69
RPP1BYDL130W OST3P48439 350 aa10.71□□□□□ -0.69
RPP1BYDL130W ARL3Q02804 198 aa10.71□□□□□ -0.69
RPP1BYDL130W MRP10O75012 95 aa10.7□□□□□ -0.7
RPP1BYDL130W YDR034C-AP0C289 58 aa10.7□□□□□ -0.7
RPP1BYDL130W HMRA2P0CY13 119 aa10.7□□□□□ -0.7
RPP1BYDL130W ENV10Q99382 181 aa10.7□□□□□ -0.7
RPP1BYDL130W HTL1Q9URQ5 78 aa10.7□□□□□ -0.7
RPP1BYDL130W YER134CP40081 178 aa10.67□□□□□ -0.7
RPP1BYDL130W YAR029WP39549 74 aa10.66□□□□□ -0.7
RPP1BYDL130W YAL064WP39711 94 aa10.66□□□□□ -0.7
RPP1BYDL130W RPC10P40422 70 aa10.66□□□□□ -0.7
RPP1BYDL130W YDR042CQ03205 200 aa10.65□□□□□ -0.7
RPP1BYDL130W YML108WQ03759 105 aa10.65□□□□□ -0.7
RPP1BYDL130W TPT1Q12272 230 aaKnown RBP10.65□□□□□ -0.7
RPP1BYDL130W YBR219CP38317 127 aa10.64□□□□□ -0.71
RPP1BYDL130W NUP42P49686 430 aaKnown RBP10.64□□□□□ -0.71
RPP1BYDL130W COA3Q3E7B2 85 aa10.63□□□□□ -0.71
RPP1BYDL130W YBL081WP38180 368 aaKnown RBP10.62□□□□□ -0.71
RPP1BYDL130W RPL31AP0C2H8 113 aaKnown RBP10.61□□□□□ -0.71
RPP1BYDL130W POP3P53833 195 aaPredicted RBP10.61□□□□□ -0.71
RPP1BYDL130W TIM11P81449 96 aaPredicted RBP10.61□□□□□ -0.71
RPP1BYDL130W CIN5P40917 295 aa10.6□□□□□ -0.71
RPP1BYDL130W YMR295CQ03559 197 aa10.6□□□□□ -0.71
RPP1BYDL130W YLR112WQ12130 139 aa10.6□□□□□ -0.71
RPP1BYDL130W RPL27BP0C2H7 136 aaKnown RBP10.59□□□□□ -0.71
RPP1BYDL130W SAP30P38429 201 aa10.59□□□□□ -0.71
RPP1BYDL130W YMR175W-AQ3E766 64 aa10.59□□□□□ -0.71
RPP1BYDL130W YDR029WQ12111 104 aa10.58□□□□□ -0.72
RPP1BYDL130W APS1P35181 156 aa10.57□□□□□ -0.72
RPP1BYDL130W SNA2P56508 79 aa10.57□□□□□ -0.72
RPP1BYDL130W ATP15P21306 62 aa10.56□□□□□ -0.72
RPP1BYDL130W YLR194CQ05777 254 aa10.55□□□□□ -0.72
RPP1BYDL130W CMC2Q3E7A4 109 aa10.55□□□□□ -0.72
RPP1BYDL130W YMR103CQ04436 120 aa10.54□□□□□ -0.72
RPP1BYDL130W MRPL33P20084 86 aa10.53□□□□□ -0.72
RPP1BYDL130W FYV4P38783 130 aaPredicted RBP10.51□□□□□ -0.73
RPP1BYDL130W YKL070WP36087 169 aa10.5□□□□□ -0.73
RPP1BYDL130W VTC1P40046 129 aaRIP-Chip data10.49□□□□□ -0.73not detected
RPP1BYDL130W DFM1Q12743 341 aaKnown RBP10.49□□□□□ -0.73
RPP1BYDL130W YAL065CO13511 128 aa10.48□□□□□ -0.73
RPP1BYDL130W SSS1P35179 80 aa10.48□□□□□ -0.73
RPP1BYDL130W CUE4Q04201 117 aaPredicted RBP10.48□□□□□ -0.73
RPP1BYDL130W SHU1P38751 150 aa10.44□□□□□ -0.74
RPP1BYDL130W AIM11P87275 137 aa10.44□□□□□ -0.74
RPP1BYDL130W YDL241WQ07738 123 aa10.44□□□□□ -0.74
RPP1BYDL130W SMP1P38128 452 aa10.43□□□□□ -0.74
RPP1BYDL130W COX14P39103 70 aa10.42□□□□□ -0.74
RPP1BYDL130W PAU16P35994 123 aa10.41□□□□□ -0.74
RPP1BYDL130W MRPL11P36521 249 aaPredicted RBP10.41□□□□□ -0.74
RPP1BYDL130W PPT2Q12036 173 aa10.41□□□□□ -0.74
RPP1BYDL130W YLR050CQ12155 161 aaKnown RBP10.41□□□□□ -0.74
RPP1BYDL130W YLR307C-AQ3E825 87 aa10.41□□□□□ -0.74
RPP1BYDL130W LCL1Q02786 101 aa10.4□□□□□ -0.74
RPP1BYDL130W CNL1Q06333 122 aa10.4□□□□□ -0.74
RPP1BYDL130W YPL261CQ08976 102 aa10.4□□□□□ -0.74
RPP1BYDL130W SEN15Q04675 128 aa10.39□□□□□ -0.75
RPP1BYDL130W YIL134C-AQ45U18 67 aa10.39□□□□□ -0.75
RPP1BYDL130W PEX22P39718 180 aa10.38□□□□□ -0.75
RPP1BYDL130W TOA2P32774 122 aa10.37□□□□□ -0.75
RPP1BYDL130W PEX17P40155 199 aa10.37□□□□□ -0.75
RPP1BYDL130W AQY2P0CD90 149 aa10.36□□□□□ -0.75
RPP1BYDL130W RPL18AP0CX49 186 aaKnown RBP10.36□□□□□ -0.75
RPP1BYDL130W RPL18BP0CX50 186 aaKnown RBP10.36□□□□□ -0.75
RPP1BYDL130W ATP16Q12165 160 aa10.36□□□□□ -0.75
RPP1BYDL130W SCS22Q6Q595 175 aa10.36□□□□□ -0.75
RPP1BYDL130W YDL022C-AP0C5L6 82 aa10.34□□□□□ -0.75
RPP1BYDL130W RPL32P38061 130 aaKnown RBP10.34□□□□□ -0.75
RPP1BYDL130W YGL041C-BQ3E750 60 aa10.34□□□□□ -0.75
RPP1BYDL130W OXA1P39952 402 aa10.33□□□□□ -0.76
RPP1BYDL130W SMD1Q02260 146 aaPredicted RBP10.33□□□□□ -0.76
RPP1BYDL130W COA6Q3E846 104 aa10.33□□□□□ -0.76
RPP1BYDL130W ECM12O13529 151 aa10.32□□□□□ -0.76
RPP1BYDL130W ADH1P00330 348 aaKnown RBP10.32□□□□□ -0.76
RPP1BYDL130W YKR041WP36134 250 aa10.32□□□□□ -0.76
RPP1BYDL130W RPF1P38805 295 aaKnown RBP10.32□□□□□ -0.76
RPP1BYDL130W CWP2P43497 92 aa10.31□□□□□ -0.76
RPP1BYDL130W QCR8P08525 94 aa10.3□□□□□ -0.76
RPP1BYDL130W HAC1P41546 238 aa10.3□□□□□ -0.76
RPP1BYDL130W ABF2Q02486 183 aa10.3□□□□□ -0.76
RPP1BYDL130W MMS2P53152 137 aa10.29□□□□□ -0.76
RPP1BYDL130W SEC11P15367 167 aa10.27□□□□□ -0.77
RPP1BYDL130W YKL044WP36092 106 aa10.25□□□□□ -0.77
RPP1BYDL130W MVB12P42939 101 aa10.25□□□□□ -0.77
RPP1BYDL130W Q0032Q9ZZX7 96 aa10.25□□□□□ -0.77
RPP1BYDL130W RPL28P02406 149 aaKnown RBP10.24□□□□□ -0.77
RPP1BYDL130W YFL067WP43537 175 aa10.24□□□□□ -0.77
RPP1BYDL130W MRPS12P53732 153 aa10.24□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms