RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W YJR146WP47174 117 aa1.05□□□□□ -2.24
TRM3YDL112W TVP18Q04767 167 aa1.05□□□□□ -2.24
TRM3YDL112W GTO3Q04806 366 aa1.05□□□□□ -2.24
TRM3YDL112W RRT15Q3E811 62 aa1.05□□□□□ -2.24
TRM3YDL112W HYP2P23301 157 aaKnown RBP1.05□□□□□ -2.24
TRM3YDL112W MSK1P32048 576 aa1.05□□□□□ -2.24
TRM3YDL112W ZRT1P32804 376 aa1.04□□□□□ -2.24
TRM3YDL112W RPF1P38805 295 aaKnown RBP1.04□□□□□ -2.24
TRM3YDL112W RPB11P38902 120 aa1.04□□□□□ -2.24
TRM3YDL112W YFL019CP43576 117 aa1.04□□□□□ -2.24
TRM3YDL112W FCF1Q05498 189 aaPredicted RBP1.04□□□□□ -2.24
TRM3YDL112W SMT3Q12306 101 aaKnown RBP1.04□□□□□ -2.24
TRM3YDL112W YAL065CO13511 128 aa1.04□□□□□ -2.24
TRM3YDL112W SMP1P38128 452 aa1.04□□□□□ -2.24
TRM3YDL112W YIL163CP40448 117 aa1.04□□□□□ -2.24
TRM3YDL112W POG1P40473 351 aa1.04□□□□□ -2.24
TRM3YDL112W YDR010CQ12426 110 aa1.04□□□□□ -2.24
TRM3YDL112W RPS22BQ3E7Y3 130 aaKnown RBP1.04□□□□□ -2.24
TRM3YDL112W DCN1Q12395 269 aa1.04□□□□□ -2.24
TRM3YDL112W CMC4Q3E7A9 73 aa1.04□□□□□ -2.24
TRM3YDL112W YCL001W-BQ96VH2 84 aa1.04□□□□□ -2.24
TRM3YDL112W FMP49A0A023PZB3 126 aa1.03□□□□□ -2.24
TRM3YDL112W YER039C-AP0CD97 72 aa1.03□□□□□ -2.24
TRM3YDL112W VMA7P39111 118 aa1.03□□□□□ -2.24
TRM3YDL112W YDR042CQ03205 200 aa1.03□□□□□ -2.24
TRM3YDL112W NHP6AP11632 93 aaKnown RBP1.03□□□□□ -2.24
TRM3YDL112W APS1P35181 156 aa1.03□□□□□ -2.24
TRM3YDL112W YBL081WP38180 368 aaKnown RBP1.03□□□□□ -2.24
TRM3YDL112W YGL193CP53097 103 aa1.03□□□□□ -2.24
TRM3YDL112W APS2Q00381 147 aa1.03□□□□□ -2.24
TRM3YDL112W PLP1Q04004 230 aa1.03□□□□□ -2.24
TRM3YDL112W CSM4Q08955 156 aa1.03□□□□□ -2.24
TRM3YDL112W VMA9Q3E7B6 73 aa1.03□□□□□ -2.24
TRM3YDL112W SPG1P50088 95 aa1.03□□□□□ -2.24
TRM3YDL112W THG1P53215 237 aaKnown RBP1.03□□□□□ -2.24
TRM3YDL112W YKL023C-AQ2V2P3 75 aa1.03□□□□□ -2.24
TRM3YDL112W YAL064WP39711 94 aa1.03□□□□□ -2.25
TRM3YDL112W PKR1Q03880 122 aaKnown RBP1.03□□□□□ -2.25
TRM3YDL112W DXO1Q06349 442 aa1.03□□□□□ -2.25
TRM3YDL112W YGL194C-AQ2V2P6 80 aa1.03□□□□□ -2.25
TRM3YDL112W RPL29P05747 59 aaPredicted RBP1.02□□□□□ -2.25
TRM3YDL112W PAU19P0CE85 124 aa1.02□□□□□ -2.25
TRM3YDL112W PAU21P0CE86 164 aa1.02□□□□□ -2.25
TRM3YDL112W PAU22P0CE87 164 aa1.02□□□□□ -2.25
TRM3YDL112W PAU3P25610 124 aa1.02□□□□□ -2.25
TRM3YDL112W TOA2P32774 122 aa1.02□□□□□ -2.25
TRM3YDL112W YBR219CP38317 127 aa1.02□□□□□ -2.25
TRM3YDL112W PAU15P40585 124 aa1.02□□□□□ -2.25
TRM3YDL112W BNS1P50084 137 aa1.02□□□□□ -2.25
TRM3YDL112W SNA2P56508 79 aa1.02□□□□□ -2.25
TRM3YDL112W TPT1Q12272 230 aaKnown RBP1.02□□□□□ -2.25
TRM3YDL112W YEL008WP40001 126 aa1.02□□□□□ -2.25
TRM3YDL112W YNL190WP53872 204 aa1.02□□□□□ -2.25
TRM3YDL112W DAD3P69850 94 aa1.02□□□□□ -2.25
TRM3YDL112W YOR008C-AQ3E7B9 74 aa1.02□□□□□ -2.25
TRM3YDL112W MBF1O14467 151 aaKnown RBP1.02□□□□□ -2.25
TRM3YDL112W YPL080CQ02826 108 aa1.02□□□□□ -2.25
TRM3YDL112W YBL039W-BP0C268 59 aa1.01□□□□□ -2.25
TRM3YDL112W CNB1P25296 175 aa1.01□□□□□ -2.25
TRM3YDL112W YKR032WP36127 104 aa1.01□□□□□ -2.25
TRM3YDL112W YBR090CP38253 122 aa1.01□□□□□ -2.25
TRM3YDL112W HUA1P40325 198 aa1.01□□□□□ -2.25
TRM3YDL112W YGR121W-AQ3E816 71 aa1.01□□□□□ -2.25
TRM3YDL112W EDC2P40023 145 aaPredicted RBP1.01□□□□□ -2.25
TRM3YDL112W JAC1P53193 184 aa1.01□□□□□ -2.25
TRM3YDL112W PAU16P35994 123 aa1.01□□□□□ -2.25
TRM3YDL112W FSF1Q12029 327 aaKnown RBP1.01□□□□□ -2.25
TRM3YDL112W AQY2P0CD90 149 aa1.01□□□□□ -2.25
TRM3YDL112W YMR295CQ03559 197 aa1.01□□□□□ -2.25
TRM3YDL112W AIM29P36154 155 aa1□□□□□ -2.25
TRM3YDL112W DAD2P36162 133 aa1□□□□□ -2.25
TRM3YDL112W KNH1P50112 268 aa1□□□□□ -2.25
TRM3YDL112W COA3Q3E7B2 85 aa1□□□□□ -2.25
TRM3YDL112W ADH3P07246 375 aaKnown RBP1□□□□□ -2.25
TRM3YDL112W QCR8P08525 94 aa1□□□□□ -2.25
TRM3YDL112W YLR156WP0CE96 114 aa1□□□□□ -2.25
TRM3YDL112W YLR159WP0CE97 114 aa1□□□□□ -2.25
TRM3YDL112W YLR161WP0CE98 114 aa1□□□□□ -2.25
TRM3YDL112W DDR48P18899 430 aaKnown RBP1□□□□□ -2.25
TRM3YDL112W SRB6P32570 121 aa1□□□□□ -2.25
TRM3YDL112W POR1P04840 283 aaKnown RBP1□□□□□ -2.25
TRM3YDL112W PET8P38921 284 aa1□□□□□ -2.25
TRM3YDL112W PEX17P40155 199 aa1□□□□□ -2.25
TRM3YDL112W SNN1P48232 102 aa1□□□□□ -2.25
TRM3YDL112W ATP14Q12349 124 aa1□□□□□ -2.25
TRM3YDL112W RPL23AP0CX41 137 aaKnown RBP0.99□□□□□ -2.25
TRM3YDL112W RPL23BP0CX42 137 aaKnown RBP0.99□□□□□ -2.25
TRM3YDL112W UBC4P15731 148 aa0.99□□□□□ -2.25
TRM3YDL112W YNR034W-AQ3E841 98 aa0.99□□□□□ -2.25
TRM3YDL112W RPL31AP0C2H8 113 aaKnown RBP0.99□□□□□ -2.25
TRM3YDL112W SCM4P32564 187 aa0.99□□□□□ -2.25
TRM3YDL112W YGL118CP53132 145 aa0.99□□□□□ -2.25
TRM3YDL112W HHO1P53551 258 aa0.99□□□□□ -2.25
TRM3YDL112W HMRA2P0CY13 119 aa0.99□□□□□ -2.25
TRM3YDL112W HAP3P13434 144 aa0.99□□□□□ -2.25
TRM3YDL112W YIA6P40556 373 aa0.99□□□□□ -2.25
TRM3YDL112W MVB12P42939 101 aa0.99□□□□□ -2.25
TRM3YDL112W RPL37BP51402 88 aaKnown RBP0.99□□□□□ -2.25
TRM3YDL112W HTL1Q9URQ5 78 aa0.99□□□□□ -2.25
TRM3YDL112W RPL18AP0CX49 186 aaKnown RBP0.98□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms