RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W MID2P36027 376 aa2.81□□□□□ -1.96
TSR1YDL060W YKR032WP36127 104 aa2.81□□□□□ -1.96
TSR1YDL060W YIL059CP40520 121 aa2.81□□□□□ -1.96
TSR1YDL060W YDR102CQ03864 110 aa2.81□□□□□ -1.96
TSR1YDL060W YLR296WQ05898 108 aa2.81□□□□□ -1.96
TSR1YDL060W YOR020W-AQ3E824 90 aa2.81□□□□□ -1.96
TSR1YDL060W RPL2AP0CX45 254 aaKnown RBP2.8□□□□□ -1.96
TSR1YDL060W RPL2BP0CX46 254 aaKnown RBP2.8□□□□□ -1.96
TSR1YDL060W NHP2P32495 156 aaPredicted RBP2.8□□□□□ -1.96
TSR1YDL060W SWD3P38123 315 aa2.8□□□□□ -1.96
TSR1YDL060W DSE2P38844 325 aa2.8□□□□□ -1.96
TSR1YDL060W YFR045WP43617 309 aa2.8□□□□□ -1.96
TSR1YDL060W YDR029WQ12111 104 aa2.8□□□□□ -1.96
TSR1YDL060W RPS22AP0C0W1 130 aaKnown RBP2.8□□□□□ -1.96
TSR1YDL060W KRE1P17260 313 aa2.8□□□□□ -1.96
TSR1YDL060W GEP7P53171 287 aa2.8□□□□□ -1.96
TSR1YDL060W YNR064CP53750 290 aa2.8□□□□□ -1.96
TSR1YDL060W YMR320WQ04897 101 aa2.8□□□□□ -1.96
TSR1YDL060W ENV10Q99382 181 aa2.8□□□□□ -1.96
TSR1YDL060W CSH1P38287 376 aa2.79□□□□□ -1.96
TSR1YDL060W YPI1P43587 155 aa2.79□□□□□ -1.96
TSR1YDL060W UBC7Q02159 165 aa2.79□□□□□ -1.96
TSR1YDL060W YPR108W-AQ3E7B3 70 aa2.79□□□□□ -1.96
TSR1YDL060W RPS22BQ3E7Y3 130 aaKnown RBP2.79□□□□□ -1.96
TSR1YDL060W PBI2P0CT04 75 aaKnown RBP2.79□□□□□ -1.96
TSR1YDL060W ROX3P25046 220 aa2.79□□□□□ -1.96
TSR1YDL060W YCR085WP25650 117 aa2.79□□□□□ -1.96
TSR1YDL060W GPI18P38211 433 aa2.79□□□□□ -1.96
TSR1YDL060W YMR141CP40211 102 aa2.79□□□□□ -1.96
TSR1YDL060W ECO1P43605 281 aa2.79□□□□□ -1.96
TSR1YDL060W YOR343CQ12484 108 aa2.79□□□□□ -1.96
TSR1YDL060W YOL085CQ99345 113 aa2.79□□□□□ -1.96
TSR1YDL060W FMP27Q06179 2628 aa2.78□□□□□ -1.96
TSR1YDL060W QCR9P22289 66 aa2.78□□□□□ -1.96
TSR1YDL060W MRPL24P36525 258 aaPredicted RBP2.78□□□□□ -1.96
TSR1YDL060W MED6P38782 295 aa2.78□□□□□ -1.96
TSR1YDL060W TSC3Q3E790 80 aa2.78□□□□□ -1.96
TSR1YDL060W YLR365WQ7LIF2 110 aa2.78□□□□□ -1.96
TSR1YDL060W TIF34P40217 347 aaKnown RBP2.78□□□□□ -1.97
TSR1YDL060W GPI19Q04082 140 aa2.78□□□□□ -1.97
TSR1YDL060W HPA2Q06592 156 aa2.78□□□□□ -1.97
TSR1YDL060W TOM40P23644 387 aaKnown RBP2.77□□□□□ -1.97
TSR1YDL060W YHR140WP38842 239 aa2.77□□□□□ -1.97
TSR1YDL060W SKI6P46948 246 aaPredicted RBP2.77□□□□□ -1.97
TSR1YDL060W YMR103CQ04436 120 aa2.77□□□□□ -1.97
TSR1YDL060W UPS1Q05776 175 aa2.77□□□□□ -1.97
TSR1YDL060W YLR042CQ07990 161 aa2.77□□□□□ -1.97
TSR1YDL060W RRT15Q3E811 62 aa2.77□□□□□ -1.97
TSR1YDL060W Q0255P03881 472 aa2.76□□□□□ -1.97
TSR1YDL060W YLR156WP0CE96 114 aa2.76□□□□□ -1.97
TSR1YDL060W YLR159WP0CE97 114 aa2.76□□□□□ -1.97
TSR1YDL060W YLR161WP0CE98 114 aa2.76□□□□□ -1.97
TSR1YDL060W CYB5P40312 120 aa2.76□□□□□ -1.97
TSR1YDL060W YGL088WP53151 121 aa2.76□□□□□ -1.97
TSR1YDL060W SDH7Q04401 133 aa2.76□□□□□ -1.97
TSR1YDL060W MRPL31P14063 131 aaPredicted RBP2.76□□□□□ -1.97
TSR1YDL060W YPL073CP40323 161 aa2.76□□□□□ -1.97
TSR1YDL060W MIX14Q04341 121 aa2.76□□□□□ -1.97
TSR1YDL060W PRM7Q12459 698 aa2.76□□□□□ -1.97
TSR1YDL060W YKL023C-AQ2V2P3 75 aa2.76□□□□□ -1.97
TSR1YDL060W BET1P22804 142 aa2.75□□□□□ -1.97
TSR1YDL060W FIP1P45976 327 aa2.75□□□□□ -1.97
TSR1YDL060W YNL190WP53872 204 aa2.75□□□□□ -1.97
TSR1YDL060W DAD1Q12248 94 aa2.75□□□□□ -1.97
TSR1YDL060W YFL041W-AQ3E817 63 aa2.75□□□□□ -1.97
TSR1YDL060W FLO9P39712 1322 aa2.75□□□□□ -1.97
TSR1YDL060W RPL30P14120 105 aaKnown RBP2.75□□□□□ -1.97
TSR1YDL060W YOR097CQ12274 175 aaPredicted RBP2.75□□□□□ -1.97
TSR1YDL060W ECM12O13529 151 aa2.74□□□□□ -1.97
TSR1YDL060W YCR050CP25630 102 aa2.74□□□□□ -1.97
TSR1YDL060W YML079WQ03629 201 aa2.74□□□□□ -1.97
TSR1YDL060W HFA1P32874 2273 aa2.74□□□□□ -1.97
TSR1YDL060W HSP150P32478 413 aa2.74□□□□□ -1.97
TSR1YDL060W YRA2P36036 203 aaKnown RBP RIP-Chip data2.74□□□□□ -1.97not detected
TSR1YDL060W YER181CP40097 107 aa2.74□□□□□ -1.97
TSR1YDL060W RAF1Q06891 181 aa2.74□□□□□ -1.97
TSR1YDL060W YOL014WQ08110 124 aa2.74□□□□□ -1.97
TSR1YDL060W VPS68Q12016 184 aa2.74□□□□□ -1.97
TSR1YDL060W ATP15P21306 62 aa2.73□□□□□ -1.97
TSR1YDL060W NCE101Q02820 53 aa2.73□□□□□ -1.97
TSR1YDL060W COF1Q03048 143 aaKnown RBP2.73□□□□□ -1.97
TSR1YDL060W YDR114CQ04597 100 aa2.73□□□□□ -1.97
TSR1YDL060W FIT2Q08906 153 aa2.73□□□□□ -1.97
TSR1YDL060W YMR175W-AQ3E766 64 aa2.73□□□□□ -1.97
TSR1YDL060W YML100W-AQ8TGT0 57 aa2.73□□□□□ -1.97
TSR1YDL060W FPR2P32472 135 aa2.73□□□□□ -1.97
TSR1YDL060W YBR209WP38311 105 aa2.73□□□□□ -1.97
TSR1YDL060W YOR268CQ08734 132 aa2.73□□□□□ -1.97
TSR1YDL060W KSH1Q8TGJ3 72 aa2.73□□□□□ -1.97
TSR1YDL060W URA2P07259 2214 aaKnown RBP2.73□□□□□ -1.97
TSR1YDL060W YKL044WP36092 106 aa2.72□□□□□ -1.97
TSR1YDL060W YHL018WP38744 120 aaPredicted RBP2.72□□□□□ -1.97
TSR1YDL060W YGR219WP53307 113 aa2.72□□□□□ -1.97
TSR1YDL060W ATP19P81451 68 aa2.72□□□□□ -1.97
TSR1YDL060W SMD1Q02260 146 aaPredicted RBP2.72□□□□□ -1.97
TSR1YDL060W IRC23Q08416 157 aa2.72□□□□□ -1.97
TSR1YDL060W YPL261CQ08976 102 aa2.72□□□□□ -1.97
TSR1YDL060W RPS27AP35997 82 aaKnown RBP2.71□□□□□ -1.98
TSR1YDL060W RPS27BP38711 82 aa2.71□□□□□ -1.98
TSR1YDL060W YFL051CP43552 160 aa2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms