RNA–Protein interactions for RNA: YCR005C

CIT2, Transcript of Citrate synthase, yeastyeast

Gene CIT2, Length 1,383 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT2YCR005C ATP23P53722 227 aa5.34□□□□□ -1.55
CIT2YCR005C YBR200W-AQ3E755 54 aa5.34□□□□□ -1.55
CIT2YCR005C RPL28P02406 149 aaKnown RBP5.33□□□□□ -1.56
CIT2YCR005C YER076CP40049 302 aa5.33□□□□□ -1.56
CIT2YCR005C DYN1P36022 4092 aa5.33□□□□□ -1.56
CIT2YCR005C AQY1P0CD91 305 aa5.32□□□□□ -1.56
CIT2YCR005C MRPL44P19956 98 aa5.32□□□□□ -1.56
CIT2YCR005C YFR035CP43608 114 aa5.32□□□□□ -1.56
CIT2YCR005C BRP1P53194 125 aa5.32□□□□□ -1.56
CIT2YCR005C RPL42AP0CX27 106 aaKnown RBP5.31□□□□□ -1.56
CIT2YCR005C RPL42BP0CX28 106 aaKnown RBP5.31□□□□□ -1.56
CIT2YCR005C CUE4Q04201 117 aaPredicted RBP5.31□□□□□ -1.56
CIT2YCR005C YCR001WP25347 104 aa5.3□□□□□ -1.56
CIT2YCR005C KTI12P34253 313 aaKnown RBP5.3□□□□□ -1.56
CIT2YCR005C TEM1P38987 245 aa5.3□□□□□ -1.56
CIT2YCR005C CPR1P14832 162 aaKnown RBP5.29□□□□□ -1.56
CIT2YCR005C MRP49P32388 137 aa5.29□□□□□ -1.56
CIT2YCR005C MRPL11P36521 249 aaPredicted RBP5.29□□□□□ -1.56
CIT2YCR005C NRG2P38082 220 aa5.29□□□□□ -1.56
CIT2YCR005C RRT13P40042 185 aa5.29□□□□□ -1.56
CIT2YCR005C YPS5P53057 165 aa5.29□□□□□ -1.56
CIT2YCR005C SGF11Q03067 99 aa5.29□□□□□ -1.56
CIT2YCR005C YLR042CQ07990 161 aa5.29□□□□□ -1.56
CIT2YCR005C YPR014CQ6B0W2 109 aa5.29□□□□□ -1.56
CIT2YCR005C HTL1Q9URQ5 78 aa5.29□□□□□ -1.56
CIT2YCR005C YKR032WP36127 104 aa5.29□□□□□ -1.56
CIT2YCR005C COA6Q3E846 104 aa5.29□□□□□ -1.56
CIT2YCR005C YKR041WP36134 250 aa5.28□□□□□ -1.56
CIT2YCR005C YER134CP40081 178 aa5.28□□□□□ -1.56
CIT2YCR005C VAM10Q08474 114 aa5.28□□□□□ -1.56
CIT2YCR005C RPL31AP0C2H8 113 aaKnown RBP5.27□□□□□ -1.57
CIT2YCR005C PET8P38921 284 aa5.27□□□□□ -1.57
CIT2YCR005C YNL217WP40152 326 aa5.27□□□□□ -1.57
CIT2YCR005C OST3P48439 350 aa5.27□□□□□ -1.57
CIT2YCR005C CNL1Q06333 122 aa5.27□□□□□ -1.57
CIT2YCR005C DGA1Q08650 418 aa5.27□□□□□ -1.57
CIT2YCR005C PFY1P07274 126 aa5.26□□□□□ -1.57
CIT2YCR005C RPS8AP0CX39 200 aaKnown RBP5.26□□□□□ -1.57
CIT2YCR005C RPS8BP0CX40 200 aaKnown RBP5.26□□□□□ -1.57
CIT2YCR005C YRA2P36036 203 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
CIT2YCR005C YNL200CP40165 246 aaKnown RBP5.26□□□□□ -1.57
CIT2YCR005C DCV1P43595 202 aa5.26□□□□□ -1.57
CIT2YCR005C PMP3P87284 55 aa5.26□□□□□ -1.57
CIT2YCR005C HAL1Q01766 294 aa5.26□□□□□ -1.57
CIT2YCR005C SEN15Q04675 128 aa5.26□□□□□ -1.57
CIT2YCR005C YGR240C-AQ3E786 66 aa5.26□□□□□ -1.57
CIT2YCR005C YIL134C-AQ45U18 67 aa5.26□□□□□ -1.57
CIT2YCR005C YKR070WP36151 352 aaKnown RBP5.25□□□□□ -1.57
CIT2YCR005C YIL014C-AQ02598 104 aa5.25□□□□□ -1.57
CIT2YCR005C SCW10Q04951 389 aa5.25□□□□□ -1.57
CIT2YCR005C RDS3Q06835 107 aaPredicted RBP5.25□□□□□ -1.57
CIT2YCR005C HAC1P41546 238 aa5.24□□□□□ -1.57
CIT2YCR005C MGR2Q02889 113 aa5.24□□□□□ -1.57
CIT2YCR005C ELC1Q03071 99 aa5.24□□□□□ -1.57
CIT2YCR005C YER039C-AP0CD97 72 aa5.23□□□□□ -1.57
CIT2YCR005C AUA1P32450 94 aa5.23□□□□□ -1.57
CIT2YCR005C KRE9P39005 276 aa5.23□□□□□ -1.57
CIT2YCR005C POP3P53833 195 aaPredicted RBP5.23□□□□□ -1.57
CIT2YCR005C YMR320WQ04897 101 aa5.23□□□□□ -1.57
CIT2YCR005C ARO2P28777 376 aaKnown RBP5.22□□□□□ -1.57
CIT2YCR005C PAU16P35994 123 aa5.22□□□□□ -1.57
CIT2YCR005C TOS6P48560 102 aa5.22□□□□□ -1.57
CIT2YCR005C CRC1Q12289 327 aa5.22□□□□□ -1.57
CIT2YCR005C YOR008C-AQ3E7B9 74 aa5.22□□□□□ -1.57
CIT2YCR005C PBI2P0CT04 75 aaKnown RBP5.21□□□□□ -1.58
CIT2YCR005C FCF1Q05498 189 aaPredicted RBP5.21□□□□□ -1.58
CIT2YCR005C HMRA2P0CY13 119 aa5.2□□□□□ -1.58
CIT2YCR005C APS1P35181 156 aa5.2□□□□□ -1.58
CIT2YCR005C YBR209WP38311 105 aa5.2□□□□□ -1.58
CIT2YCR005C ERI1P62651 68 aaKnown RBP5.2□□□□□ -1.58
CIT2YCR005C YDR042CQ03205 200 aa5.2□□□□□ -1.58
CIT2YCR005C UBC5P15732 148 aa5.19□□□□□ -1.58
CIT2YCR005C YIL059CP40520 121 aa5.19□□□□□ -1.58
CIT2YCR005C YJL028WP47062 111 aa5.19□□□□□ -1.58
CIT2YCR005C FYV4P38783 130 aaPredicted RBP5.18□□□□□ -1.58
CIT2YCR005C ARC15P40518 154 aaRIP-Chip data5.18□□□□□ -1.58not detected
CIT2YCR005C SPC1P46965 94 aa5.18□□□□□ -1.58
CIT2YCR005C AIM11P87275 137 aa5.18□□□□□ -1.58
CIT2YCR005C IGO2Q9P305 131 aa5.18□□□□□ -1.58
CIT2YCR005C RPL16AP26784 199 aaKnown RBP5.17□□□□□ -1.58
CIT2YCR005C YGL088WP53151 121 aa5.17□□□□□ -1.58
CIT2YCR005C COF1Q03048 143 aaKnown RBP5.17□□□□□ -1.58
CIT2YCR005C TRP1P00912 224 aa5.16□□□□□ -1.58
CIT2YCR005C FUN14P18411 198 aa5.16□□□□□ -1.58
CIT2YCR005C YMR103CQ04436 120 aa5.16□□□□□ -1.58
CIT2YCR005C YMR122W-AQ3E842 84 aa5.16□□□□□ -1.58
CIT2YCR005C YCL021W-AQ96VH3 125 aa5.16□□□□□ -1.58
CIT2YCR005C YJR146WP47174 117 aa5.16□□□□□ -1.58
CIT2YCR005C YLR112WQ12130 139 aa5.16□□□□□ -1.58
CIT2YCR005C YHR130CP38834 111 aa5.15□□□□□ -1.59
CIT2YCR005C PEX22P39718 180 aa5.15□□□□□ -1.59
CIT2YCR005C OST2P46964 130 aa5.15□□□□□ -1.59
CIT2YCR005C YGL230CP53074 147 aa5.15□□□□□ -1.59
CIT2YCR005C ISD11Q6Q560 94 aa5.15□□□□□ -1.59
CIT2YCR005C YPR010C-AA5Z2X5 72 aa5.14□□□□□ -1.59
CIT2YCR005C COA3Q3E7B2 85 aa5.14□□□□□ -1.59
CIT2YCR005C SCS22Q6Q595 175 aa5.14□□□□□ -1.59
CIT2YCR005C ATP5P09457 212 aa5.13□□□□□ -1.59
CIT2YCR005C MSL1P40567 111 aaPredicted RBP5.13□□□□□ -1.59
CIT2YCR005C RPR2P40571 144 aa5.13□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms