RNA–Protein interactions for RNA: YBR286W

APE3, Transcript of Vacuolar aminopeptidase Y, yeast

Gene APE3, Length 1,614 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APE3	YBR286W	RPL27B	P0C2H7	136 aa	Known RBP	4.28	□□□□□ -1.72
APE3	YBR286W	HMRA2	P0CY13	119 aa		4.28	□□□□□ -1.72
APE3	YBR286W	YCR001W	P25347	104 aa		4.28	□□□□□ -1.72
APE3	YBR286W	YNL217W	P40152	326 aa		4.28	□□□□□ -1.72
APE3	YBR286W	YCH1	P42937	148 aa		4.28	□□□□□ -1.72
APE3	YBR286W	COA3	Q3E7B2	85 aa		4.28	□□□□□ -1.72
APE3	YBR286W	YKR070W	P36151	352 aa	Known RBP	4.27	□□□□□ -1.73
APE3	YBR286W	KRE9	P39005	276 aa		4.27	□□□□□ -1.73
APE3	YBR286W	YMR103C	Q04436	120 aa		4.27	□□□□□ -1.73
APE3	YBR286W	DGA1	Q08650	418 aa		4.27	□□□□□ -1.73
APE3	YBR286W	YLR050C	Q12155	161 aa	Known RBP	4.27	□□□□□ -1.73
APE3	YBR286W	RPL16A	P26784	199 aa	Known RBP	4.26	□□□□□ -1.73
APE3	YBR286W	MSL1	P40567	111 aa	Predicted RBP	4.26	□□□□□ -1.73
APE3	YBR286W	YJR146W	P47174	117 aa		4.26	□□□□□ -1.73
APE3	YBR286W	YLR281C	Q05863	155 aa		4.26	□□□□□ -1.73
APE3	YBR286W	ATP5	P09457	212 aa		4.25	□□□□□ -1.73
APE3	YBR286W	APS1	P35181	156 aa		4.25	□□□□□ -1.73
APE3	YBR286W	YLR122C	Q12312	125 aa		4.25	□□□□□ -1.73
APE3	YBR286W	AUA1	P32450	94 aa		4.24	□□□□□ -1.73
APE3	YBR286W	YPT53	P36019	220 aa		4.24	□□□□□ -1.73
APE3	YBR286W	BET5	Q03630	159 aa		4.24	□□□□□ -1.73
APE3	YBR286W	RDS3	Q06835	107 aa	Predicted RBP	4.24	□□□□□ -1.73
APE3	YBR286W	YOR008C-A	Q3E7B9	74 aa		4.24	□□□□□ -1.73
APE3	YBR286W	YDL022C-A	P0C5L6	82 aa		4.24	□□□□□ -1.73
APE3	YBR286W	UBC5	P15732	148 aa		4.24	□□□□□ -1.73
APE3	YBR286W	AIM29	P36154	155 aa		4.24	□□□□□ -1.73
APE3	YBR286W	YGL088W	P53151	121 aa		4.24	□□□□□ -1.73
APE3	YBR286W	DFM1	Q12743	341 aa	Known RBP	4.24	□□□□□ -1.73
APE3	YBR286W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.24	□□□□□ -1.73
APE3	YBR286W	SAE3	P89114	91 aa		4.23	□□□□□ -1.73
APE3	YBR286W	YBR209W	P38311	105 aa		4.22	□□□□□ -1.73
APE3	YBR286W	URM1	P40554	99 aa	Predicted RBP	4.22	□□□□□ -1.73
APE3	YBR286W	VAM10	Q08474	114 aa		4.22	□□□□□ -1.73
APE3	YBR286W	YCR075W-A	Q3E830	75 aa		4.22	□□□□□ -1.73
APE3	YBR286W	YCR007C	P25354	239 aa		4.21	□□□□□ -1.73
APE3	YBR286W	YEL067C	P39978	195 aa		4.21	□□□□□ -1.73
APE3	YBR286W	PMP3	P87284	55 aa		4.21	□□□□□ -1.73
APE3	YBR286W	PAU23	Q07987	124 aa		4.21	□□□□□ -1.73
APE3	YBR286W	PAU17	Q12370	124 aa		4.21	□□□□□ -1.73
APE3	YBR286W	ADH2	P00331	348 aa	Known RBP	4.21	□□□□□ -1.74
APE3	YBR286W	TRP1	P00912	224 aa		4.21	□□□□□ -1.74
APE3	YBR286W	ATP15	P21306	62 aa		4.21	□□□□□ -1.74
APE3	YBR286W	YKL044W	P36092	106 aa		4.21	□□□□□ -1.74
APE3	YBR286W	YGR240C-A	Q3E786	66 aa		4.21	□□□□□ -1.74
APE3	YBR286W	RPP2A	P05319	106 aa	Known RBP	4.2	□□□□□ -1.74
APE3	YBR286W	MRP49	P32388	137 aa		4.2	□□□□□ -1.74
APE3	YBR286W	YEL008W	P40001	126 aa		4.2	□□□□□ -1.74
APE3	YBR286W	YIL059C	P40520	121 aa		4.2	□□□□□ -1.74
APE3	YBR286W	AIM11	P87275	137 aa		4.2	□□□□□ -1.74
APE3	YBR286W	SGF11	Q03067	99 aa		4.2	□□□□□ -1.74
APE3	YBR286W	YPL261C	Q08976	102 aa		4.2	□□□□□ -1.74
APE3	YBR286W	RPL31A	P0C2H8	113 aa	Known RBP	4.19	□□□□□ -1.74
APE3	YBR286W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
APE3	YBR286W	ARC15	P40518	154 aa	RIP-Chip data	4.19	□□□□□ -1.74	not detected
APE3	YBR286W	SCW10	Q04951	389 aa		4.19	□□□□□ -1.74
APE3	YBR286W	YPL073C	P40323	161 aa		4.18	□□□□□ -1.74
APE3	YBR286W	CRC1	Q12289	327 aa		4.18	□□□□□ -1.74
APE3	YBR286W	RPS8A	P0CX39	200 aa	Known RBP	4.17	□□□□□ -1.74
APE3	YBR286W	RPS8B	P0CX40	200 aa	Known RBP	4.17	□□□□□ -1.74
APE3	YBR286W	YKR041W	P36134	250 aa		4.17	□□□□□ -1.74
APE3	YBR286W	RPL32	P38061	130 aa	Known RBP	4.17	□□□□□ -1.74
APE3	YBR286W	VTC1	P40046	129 aa	RIP-Chip data	4.17	□□□□□ -1.74	not detected
APE3	YBR286W	YNR077C	P53758	84 aa		4.17	□□□□□ -1.74
APE3	YBR286W	HAL1	Q01766	294 aa		4.17	□□□□□ -1.74
APE3	YBR286W	MHR1	Q06630	226 aa		4.17	□□□□□ -1.74
APE3	YBR286W	YMR122W-A	Q3E842	84 aa		4.17	□□□□□ -1.74
APE3	YBR286W	YBR219C	P38317	127 aa		4.17	□□□□□ -1.74
APE3	YBR286W	GLC8	P41818	229 aa		4.17	□□□□□ -1.74
APE3	YBR286W	YLR194C	Q05777	254 aa		4.17	□□□□□ -1.74
APE3	YBR286W	YCL021W-A	Q96VH3	125 aa		4.17	□□□□□ -1.74
APE3	YBR286W	RUB1	Q03919	77 aa		4.16	□□□□□ -1.74
APE3	YBR286W	RPF1	P38805	295 aa	Known RBP	4.15	□□□□□ -1.74
APE3	YBR286W	YPL080C	Q02826	108 aa		4.15	□□□□□ -1.74
APE3	YBR286W	HAP3	P13434	144 aa		4.14	□□□□□ -1.75
APE3	YBR286W	YFR057W	P43625	151 aa		4.14	□□□□□ -1.75
APE3	YBR286W	MRPS12	P53732	153 aa		4.14	□□□□□ -1.75
APE3	YBR286W	ERI1	P62651	68 aa	Known RBP	4.14	□□□□□ -1.75
APE3	YBR286W	YMR295C	Q03559	197 aa		4.14	□□□□□ -1.75
APE3	YBR286W	RPL18A	P0CX49	186 aa	Known RBP	4.13	□□□□□ -1.75
APE3	YBR286W	RPL18B	P0CX50	186 aa	Known RBP	4.13	□□□□□ -1.75
APE3	YBR286W	YAR1	P46683	200 aa		4.13	□□□□□ -1.75
APE3	YBR286W	YLR363W-A	Q3E747	85 aa		4.13	□□□□□ -1.75
APE3	YBR286W	RPL28	P02406	149 aa	Known RBP	4.13	□□□□□ -1.75
APE3	YBR286W	SHU1	P38751	150 aa		4.13	□□□□□ -1.75
APE3	YBR286W	OXA1	P39952	402 aa		4.13	□□□□□ -1.75
APE3	YBR286W	ERG28	P40030	148 aa		4.13	□□□□□ -1.75
APE3	YBR286W	CWC27	Q02770	301 aa		4.13	□□□□□ -1.75
APE3	YBR286W	PEX17	P40155	199 aa		4.12	□□□□□ -1.75
APE3	YBR286W	YNL190W	P53872	204 aa		4.12	□□□□□ -1.75
APE3	YBR286W	YLL066W-B	Q8TGJ7	56 aa		4.12	□□□□□ -1.75
APE3	YBR286W	IGO2	Q9P305	131 aa		4.12	□□□□□ -1.75
APE3	YBR286W	DIF1	O13577	133 aa		4.11	□□□□□ -1.75
APE3	YBR286W	RPL33A	P05744	107 aa	Known RBP	4.11	□□□□□ -1.75
APE3	YBR286W	RPL33B	P41056	107 aa	Known RBP	4.11	□□□□□ -1.75
APE3	YBR286W	YBR182C-A	Q8TGU6	64 aa		4.11	□□□□□ -1.75
APE3	YBR286W	YAR029W	P39549	74 aa		4.1	□□□□□ -1.75
APE3	YBR286W	ELC1	Q03071	99 aa		4.1	□□□□□ -1.75
APE3	YBR286W	YMR320W	Q04897	101 aa		4.1	□□□□□ -1.75
APE3	YBR286W	MBF1	O14467	151 aa	Known RBP	4.1	□□□□□ -1.75
APE3	YBR286W	YPR170W-B	P0C5R9	85 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms