RNA–Protein interactions for RNA: SCR1

SCR1, Transcript of RNA subunit of the Signal Recognition Particle (SRP), yeastyeast

Gene SCR1, Length 522 nt, Biotype ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCR1SCR1 OST3P48439 350 aa10.15□□□□□ -0.78
SCR1SCR1 ENV10Q99382 181 aa10.15□□□□□ -0.78
SCR1SCR1 YDR034C-AP0C289 58 aa10.14□□□□□ -0.79
SCR1SCR1 AQY1P0CD91 305 aa10.14□□□□□ -0.79
SCR1SCR1 YAR029WP39549 74 aa10.14□□□□□ -0.79
SCR1SCR1 YIL014C-AQ02598 104 aa10.14□□□□□ -0.79
SCR1SCR1 YCL021W-AQ96VH3 125 aa10.14□□□□□ -0.79
SCR1SCR1 URM1P40554 99 aaPredicted RBP10.13□□□□□ -0.79
SCR1SCR1 ERV14P53173 138 aa10.13□□□□□ -0.79
SCR1SCR1 PKR1Q03880 122 aaKnown RBP10.13□□□□□ -0.79
SCR1SCR1 CYT2Q00873 224 aa10.12□□□□□ -0.79
SCR1SCR1 MED7Q08278 222 aa10.12□□□□□ -0.79
SCR1SCR1 PCL2P25693 308 aa10.11□□□□□ -0.79
SCR1SCR1 SAP30P38429 201 aa10.1□□□□□ -0.79
SCR1SCR1 YER085CP40058 173 aa10.1□□□□□ -0.79
SCR1SCR1 HTL1Q9URQ5 78 aa10.1□□□□□ -0.79
SCR1SCR1 PRE1P22141 198 aaKnown RBP10.09□□□□□ -0.79
SCR1SCR1 RPC10P40422 70 aa10.09□□□□□ -0.79
SCR1SCR1 YEL008WP40001 126 aa10.08□□□□□ -0.8
SCR1SCR1 NUP42P49686 430 aaKnown RBP10.07□□□□□ -0.8
SCR1SCR1 YDR029WQ12111 104 aa10.04□□□□□ -0.8
SCR1SCR1 YMR175W-AQ3E766 64 aa10.04□□□□□ -0.8
SCR1SCR1 HMRA2P0CY13 119 aa10.03□□□□□ -0.8
SCR1SCR1 YAL064WP39711 94 aa10.03□□□□□ -0.8
SCR1SCR1 CIN5P40917 295 aa10.03□□□□□ -0.8
SCR1SCR1 GSP1P32835 219 aaKnown RBP10.01□□□□□ -0.81
SCR1SCR1 GSP2P32836 220 aaKnown RBP10.01□□□□□ -0.81
SCR1SCR1 DFM1Q12743 341 aaKnown RBP10.01□□□□□ -0.81
SCR1SCR1 APS1P35181 156 aa10□□□□□ -0.81
SCR1SCR1 SNA2P56508 79 aa10□□□□□ -0.81
SCR1SCR1 YDR042CQ03205 200 aa10□□□□□ -0.81
SCR1SCR1 RPL31AP0C2H8 113 aaKnown RBP9.99□□□□□ -0.81
SCR1SCR1 YBR219CP38317 127 aa9.99□□□□□ -0.81
SCR1SCR1 YBL081WP38180 368 aaKnown RBP9.98□□□□□ -0.81
SCR1SCR1 TPT1Q12272 230 aaKnown RBP9.98□□□□□ -0.81
SCR1SCR1 YLR194CQ05777 254 aa9.97□□□□□ -0.81
SCR1SCR1 COA3Q3E7B2 85 aa9.97□□□□□ -0.81
SCR1SCR1 RPL27BP0C2H7 136 aaKnown RBP9.96□□□□□ -0.82
SCR1SCR1 YMR295CQ03559 197 aa9.96□□□□□ -0.82
SCR1SCR1 ARL3Q02804 198 aa9.95□□□□□ -0.82
SCR1SCR1 VTC1P40046 129 aaRIP-Chip data9.93□□□□□ -0.82not detected
SCR1SCR1 YER134CP40081 178 aa9.93□□□□□ -0.82
SCR1SCR1 POP3P53833 195 aaPredicted RBP9.93□□□□□ -0.82
SCR1SCR1 YLR112WQ12130 139 aa9.93□□□□□ -0.82
SCR1SCR1 CMC2Q3E7A4 109 aa9.93□□□□□ -0.82
SCR1SCR1 LCL1Q02786 101 aa9.91□□□□□ -0.82
SCR1SCR1 YDL241WQ07738 123 aa9.91□□□□□ -0.82
SCR1SCR1 YML108WQ03759 105 aa9.9□□□□□ -0.82
SCR1SCR1 ATP15P21306 62 aa9.89□□□□□ -0.83
SCR1SCR1 YMR103CQ04436 120 aa9.89□□□□□ -0.83
SCR1SCR1 YAL065CO13511 128 aa9.88□□□□□ -0.83
SCR1SCR1 PPT2Q12036 173 aa9.87□□□□□ -0.83
SCR1SCR1 YLR307C-AQ3E825 87 aa9.87□□□□□ -0.83
SCR1SCR1 YKL070WP36087 169 aa9.86□□□□□ -0.83
SCR1SCR1 YGL041C-BQ3E750 60 aa9.85□□□□□ -0.83
SCR1SCR1 SMP1P38128 452 aa9.83□□□□□ -0.84
SCR1SCR1 SHU1P38751 150 aa9.82□□□□□ -0.84
SCR1SCR1 FYV4P38783 130 aaPredicted RBP9.82□□□□□ -0.84
SCR1SCR1 COX14P39103 70 aa9.82□□□□□ -0.84
SCR1SCR1 TIM11P81449 96 aaPredicted RBP9.82□□□□□ -0.84
SCR1SCR1 RPF1P38805 295 aaKnown RBP9.81□□□□□ -0.84
SCR1SCR1 AQY2P0CD90 149 aa9.79□□□□□ -0.84
SCR1SCR1 TOA2P32774 122 aa9.79□□□□□ -0.84
SCR1SCR1 PEX22P39718 180 aa9.79□□□□□ -0.84
SCR1SCR1 AIM11P87275 137 aa9.79□□□□□ -0.84
SCR1SCR1 CUE4Q04201 117 aaPredicted RBP9.79□□□□□ -0.84
SCR1SCR1 YLR050CQ12155 161 aaKnown RBP9.79□□□□□ -0.84
SCR1SCR1 ECM12O13529 151 aa9.78□□□□□ -0.84
SCR1SCR1 PEX17P40155 199 aa9.78□□□□□ -0.84
SCR1SCR1 CNL1Q06333 122 aa9.78□□□□□ -0.84
SCR1SCR1 SSS1P35179 80 aa9.75□□□□□ -0.85
SCR1SCR1 PAU16P35994 123 aa9.75□□□□□ -0.85
SCR1SCR1 RPL32P38061 130 aaKnown RBP9.75□□□□□ -0.85
SCR1SCR1 OXA1P39952 402 aa9.75□□□□□ -0.85
SCR1SCR1 MMS2P53152 137 aa9.75□□□□□ -0.85
SCR1SCR1 QCR8P08525 94 aa9.74□□□□□ -0.85
SCR1SCR1 MRPL33P20084 86 aa9.74□□□□□ -0.85
SCR1SCR1 SMD1Q02260 146 aaPredicted RBP9.74□□□□□ -0.85
SCR1SCR1 ADH1P00330 348 aaKnown RBP9.73□□□□□ -0.85
SCR1SCR1 RPL18AP0CX49 186 aaKnown RBP9.73□□□□□ -0.85
SCR1SCR1 RPL18BP0CX50 186 aaKnown RBP9.73□□□□□ -0.85
SCR1SCR1 CWP2P43497 92 aa9.73□□□□□ -0.85
SCR1SCR1 ABF2Q02486 183 aa9.73□□□□□ -0.85
SCR1SCR1 YPL261CQ08976 102 aa9.73□□□□□ -0.85
SCR1SCR1 AIM19P40502 157 aa9.71□□□□□ -0.86
SCR1SCR1 YFL067WP43537 175 aa9.71□□□□□ -0.86
SCR1SCR1 MRPL11P36521 249 aaPredicted RBP9.7□□□□□ -0.86
SCR1SCR1 HAP3P13434 144 aa9.69□□□□□ -0.86
SCR1SCR1 COA6Q3E846 104 aa9.69□□□□□ -0.86
SCR1SCR1 Q0032Q9ZZX7 96 aa9.69□□□□□ -0.86
SCR1SCR1 STF1P01098 86 aa9.68□□□□□ -0.86
SCR1SCR1 YKR041WP36134 250 aa9.68□□□□□ -0.86
SCR1SCR1 MVB12P42939 101 aa9.67□□□□□ -0.86
SCR1SCR1 YBL039W-BP0C268 59 aa9.66□□□□□ -0.86
SCR1SCR1 YFL019CP43576 117 aa9.66□□□□□ -0.86
SCR1SCR1 MBF1O14467 151 aaKnown RBP9.65□□□□□ -0.86
SCR1SCR1 ATP16Q12165 160 aa9.65□□□□□ -0.86
SCR1SCR1 YIL134C-AQ45U18 67 aa9.65□□□□□ -0.86
SCR1SCR1 YKL044WP36092 106 aa9.64□□□□□ -0.87
SCR1SCR1 YDL022C-AP0C5L6 82 aa9.63□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 1265.3 ms