RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 PLD1Q13393 1074 aa13.01□□□□□ -0.33
LINC00339-213ENST00000642137 SLC18A3Q16572 532 aa13.01□□□□□ -0.33
LINC00339-213ENST00000642137 ACAD10Q6JQN1 1059 aa13.01□□□□□ -0.33
LINC00339-213ENST00000642137 PMF1Q6P1K2 205 aa13.01□□□□□ -0.33
LINC00339-213ENST00000642137 ELMSAN1Q6PJG2 1045 aa13.01□□□□□ -0.33
LINC00339-213ENST00000642137 TMEM184AQ6ZMB5 413 aa13.01□□□□□ -0.33
LINC00339-213ENST00000642137 SPATA31D4Q6ZUB0 917 aa13.01□□□□□ -0.33
LINC00339-213ENST00000642137 PIGZQ86VD9 579 aa13.01□□□□□ -0.33
LINC00339-213ENST00000642137 SCN4BQ8IWT1 228 aa13.01□□□□□ -0.33
LINC00339-213ENST00000642137 NOX5Q96PH1 765 aa13.01□□□□□ -0.33
LINC00339-213ENST00000642137 GAS2L1Q99501 681 aaPredicted RBP13.01□□□□□ -0.33
LINC00339-213ENST00000642137 SEPT5Q99719 369 aaPredicted RBP13.01□□□□□ -0.33
LINC00339-213ENST00000642137 SLC4A5Q9BY07 1137 aa13.01□□□□□ -0.33
LINC00339-213ENST00000642137 RHOBTB2Q9BYZ6 727 aa13.01□□□□□ -0.33
LINC00339-213ENST00000642137 TMEM30AQ9NV96 361 aa13.01□□□□□ -0.33
LINC00339-213ENST00000642137 SEPT11Q9NVA2 429 aaKnown RBP13.01□□□□□ -0.33
LINC00339-213ENST00000642137 COMMD8Q9NX08 183 aa13.01□□□□□ -0.33
LINC00339-213ENST00000642137 HCFC2Q9Y5Z7 792 aa13.01□□□□□ -0.33
LINC00339-213ENST00000642137 EPN1Q9Y6I3 576 aaPredicted RBP13.01□□□□□ -0.33
LINC00339-213ENST00000642137 MYO7AQ13402 2215 aa13.01□□□□□ -0.33
LINC00339-213ENST00000642137 TRIOBPQ9H2D6 2365 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 A0A087X0T9 212 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 HHLA1C9JL84 531 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 F8VP50 259 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 PRRG1O14668 218 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 NCK2O43639 380 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 ZMYND10O75800 440 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 LCA5LO95447 670 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 FAM228BP0C875 321 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 EPCAMP16422 314 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 KIF11P52732 1056 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 CENPCQ03188 943 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 HYAL1Q12794 435 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 ADAM15Q13444 863 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 ADGRE1Q14246 886 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 DDR2Q16832 855 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 TCEAL5Q5H9L2 206 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 RAB41Q5JT25 222 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 CCDC122Q5T0U0 273 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 C10orf76Q5T2E6 689 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 ALKBH5Q6P6C2 394 aaKnown RBP13□□□□□ -0.33
LINC00339-213ENST00000642137 TMEM110Q86TL2 294 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 ERICH1Q86X53 443 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 PHF13Q86YI8 300 aaPredicted RBP13□□□□□ -0.33
LINC00339-213ENST00000642137 PASD1Q8IV76 773 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 NUP93Q8N1F7 819 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 TTC9BQ8N6N2 239 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 C1orf131Q8NDD1 294 aaKnown RBP13□□□□□ -0.33
LINC00339-213ENST00000642137 CPA5Q8WXQ8 436 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 VCPIP1Q96JH7 1222 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 PPP1R13BQ96KQ4 1090 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 MIS12Q9H081 205 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 ISCUQ9H1K1 167 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 CYTH4Q9UIA0 394 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 NAGPAQ9UK23 515 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 ASB3Q9Y575 518 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 INSL5Q9Y5Q6 135 aa13□□□□□ -0.33
LINC00339-213ENST00000642137 SOWAHDA6NJG2 315 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 EIF3CLB5ME19 914 aaKnown RBP12.99□□□□□ -0.33
LINC00339-213ENST00000642137 TULP2O00295 520 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 TNFRSF10BO14763 440 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 ARHGAP6O43182 974 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 RTN3O95197 1032 aaPredicted RBP12.99□□□□□ -0.33
LINC00339-213ENST00000642137 PAPLNO95428 1278 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 FTLP02792 175 aaPredicted RBP12.99□□□□□ -0.33
LINC00339-213ENST00000642137 C8AP07357 584 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 CSH1P0DML2 217 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 CSH2P0DML3 217 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 IGFBP4P22692 258 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 HOXA9P31269 272 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 NSFP46459 744 aaKnown RBP12.99□□□□□ -0.33
LINC00339-213ENST00000642137 GABRB2P47870 512 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 EPHB3P54753 998 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 GFPT1Q06210 699 aaPredicted RBP12.99□□□□□ -0.33
LINC00339-213ENST00000642137 PPM1LQ5SGD2 360 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 LIN9Q5TKA1 542 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 NAA35Q5VZE5 725 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 RAD9BQ6WBX8 426 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 DENND5BQ6ZUT9 1274 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 SCML4Q8N228 414 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 EFHBQ8N7U6 833 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 MSANTD4Q8NCY6 345 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 SLC7A14Q8TBB6 771 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 CASP10Q92851 521 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 C18orf8Q96DM3 657 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 FAM161BQ96MY7 647 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 EIF3CQ99613 913 aaKnown RBP12.99□□□□□ -0.33
LINC00339-213ENST00000642137 IGFLR1Q9H665 355 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 LRRC4Q9HBW1 653 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 MAN1C1Q9NR34 630 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 IL37Q9NZH6 218 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 EHD2Q9NZN4 543 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 NENFQ9UMX5 172 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 YIPF1Q9Y548 306 aa12.99□□□□□ -0.33
LINC00339-213ENST00000642137 GREB1Q4ZG55 1949 aa12.98□□□□□ -0.33
LINC00339-213ENST00000642137 SLC38A8A6NNN8 435 aa12.98□□□□□ -0.33
LINC00339-213ENST00000642137 GABBR2O75899 941 aa12.98□□□□□ -0.33
LINC00339-213ENST00000642137 SOAT2O75908 522 aa12.98□□□□□ -0.33
LINC00339-213ENST00000642137 NDUFA10O95299 355 aa12.98□□□□□ -0.33
LINC00339-213ENST00000642137 LRG1P02750 347 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms