RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 KHDC1Q4VXA5 237 aaKnown RBP14.47□□□□□ -0.09
PHGDH-233ENST00000642021 SH3PXD2AQ5TCZ1 1133 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 FYB2Q5VWT5 728 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 TRIM68Q6AZZ1 485 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 ZPBP2Q6X784 338 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 DSTYKQ6XUX3 929 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 SH2D5Q6ZV89 423 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 RFX6Q8HWS3 928 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 THNSL1Q8IYQ7 743 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 SCYL3Q8IZE3 742 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 PDIK1LQ8N165 341 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 KCTD6Q8NC69 237 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 HSPH1Q92598 858 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 LBHD1Q9BQE6 289 aaPredicted RBP14.47□□□□□ -0.09
PHGDH-233ENST00000642021 VPS11Q9H270 941 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 HACL1Q9UJ83 578 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 CPSF3Q9UKF6 684 aaKnown RBP14.47□□□□□ -0.09
PHGDH-233ENST00000642021 AFG3L2Q9Y4W6 797 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 COL11A1P12107 1806 aaPredicted RBP14.47□□□□□ -0.09
PHGDH-233ENST00000642021 RLFQ13129 1914 aa14.46□□□□□ -0.09
PHGDH-233ENST00000642021 TCRBV9S1A1TA0A576 114 aa14.46□□□□□ -0.09
PHGDH-233ENST00000642021 SMNDC1O75940 238 aaKnown RBP eCLIP14.46□□□□□ -0.09
PHGDH-233ENST00000642021 NEBLO76041 1014 aa14.46□□□□□ -0.09
PHGDH-233ENST00000642021 ERBB2P04626 1255 aa14.46□□□□□ -0.09
PHGDH-233ENST00000642021 KRT7P08729 469 aa14.46□□□□□ -0.09
PHGDH-233ENST00000642021 RBP3P10745 1247 aa14.46□□□□□ -0.09
PHGDH-233ENST00000642021 UBA1P22314 1058 aaKnown RBP14.46□□□□□ -0.09
PHGDH-233ENST00000642021 MIPP30301 263 aa14.46□□□□□ -0.09
PHGDH-233ENST00000642021 RASSF2P50749 326 aa14.46□□□□□ -0.09
PHGDH-233ENST00000642021 EIF3EP60228 445 aaKnown RBP14.46□□□□□ -0.09
PHGDH-233ENST00000642021 KBTBD12Q3ZCT8 623 aa14.46□□□□□ -0.09
PHGDH-233ENST00000642021 ENDOVQ8N8Q3 282 aaKnown RBP14.46□□□□□ -0.09
PHGDH-233ENST00000642021 MICAL1Q8TDZ2 1067 aa14.46□□□□□ -0.09
PHGDH-233ENST00000642021 FAM111AQ96PZ2 611 aa14.46□□□□□ -0.09
PHGDH-233ENST00000642021 TWNKQ96RR1 684 aa14.46□□□□□ -0.09
PHGDH-233ENST00000642021 WRNIP1Q96S55 665 aa14.46□□□□□ -0.09
PHGDH-233ENST00000642021 TRIM6Q9C030 488 aaPredicted RBP14.46□□□□□ -0.09
PHGDH-233ENST00000642021 LNPEPQ9UIQ6 1025 aa14.46□□□□□ -0.09
PHGDH-233ENST00000642021 TM9SF1O15321 606 aa14.46□□□□□ -0.09
PHGDH-233ENST00000642021 FAM155BO75949 473 aa14.46□□□□□ -0.09
PHGDH-233ENST00000642021 TROVE2P10155 538 aaKnown RBP eCLIP14.46□□□□□ -0.09
PHGDH-233ENST00000642021 SERPINB3P29508 390 aa14.46□□□□□ -0.09
PHGDH-233ENST00000642021 ICAM3P32942 547 aa14.46□□□□□ -0.09
PHGDH-233ENST00000642021 PTDSS1P48651 473 aaKnown RBP14.46□□□□□ -0.09
PHGDH-233ENST00000642021 AP3M2P53677 418 aa14.46□□□□□ -0.09
PHGDH-233ENST00000642021 BLMHQ13867 455 aa14.46□□□□□ -0.09
PHGDH-233ENST00000642021 PRPF39Q86UA1 669 aaKnown RBP14.46□□□□□ -0.09
PHGDH-233ENST00000642021 ZC3H18Q86VM9 953 aaKnown RBP14.46□□□□□ -0.09
PHGDH-233ENST00000642021 XYLT1Q86Y38 959 aa14.46□□□□□ -0.09
PHGDH-233ENST00000642021 TMEM192Q8IY95 271 aa14.46□□□□□ -0.09
PHGDH-233ENST00000642021 LRRC71Q8N4P6 559 aa14.46□□□□□ -0.09
PHGDH-233ENST00000642021 TTC13Q8NBP0 860 aa14.46□□□□□ -0.09
PHGDH-233ENST00000642021 CMASQ8NFW8 434 aaPredicted RBP14.46□□□□□ -0.09
PHGDH-233ENST00000642021 SPDL1Q96EA4 605 aa14.46□□□□□ -0.09
PHGDH-233ENST00000642021 HMGXB4Q9UGU5 601 aa14.46□□□□□ -0.09
PHGDH-233ENST00000642021 KBTBD13C9JR72 458 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 OGTO15294 1046 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 LPXNO60711 386 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 MAFO75444 373 aaPredicted RBP14.45□□□□□ -0.1
PHGDH-233ENST00000642021 FARP2O94887 1054 aaPredicted RBP14.45□□□□□ -0.1
PHGDH-233ENST00000642021 MT-ND3P03897 115 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 DHRS4L1P0CG22 281 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 MARK3P27448 753 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 STAT5BP51692 787 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 HADHQ16836 314 aaKnown RBP14.45□□□□□ -0.1
PHGDH-233ENST00000642021 TMEM132AQ24JP5 1023 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 WASHC2DQ5SRD0 308 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 C4orf50Q6ZRC1 276 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 CATSPERGQ6ZRH7 1159 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 CDHR3Q6ZTQ4 885 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 TTC7BQ86TV6 843 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 RNF149Q8NC42 400 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 SPATA18Q8TC71 538 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 ZNF398Q8TD17 642 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 PTCD3Q96EY7 689 aaKnown RBP14.45□□□□□ -0.1
PHGDH-233ENST00000642021 PEBP4Q96S96 227 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 TSSK1BQ9BXA7 367 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 CALN1Q9BXU9 219 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 MRPL4Q9BYD3 311 aaKnown RBP14.45□□□□□ -0.1
PHGDH-233ENST00000642021 SDCBP2Q9H190 292 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 SAR1AQ9NR31 198 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 STRIP2Q9ULQ0 834 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 GJB1P08034 283 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 PYGBP11216 843 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 BGNP21810 368 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 YWHAEP62258 255 aaKnown RBP14.45□□□□□ -0.1
PHGDH-233ENST00000642021 PTK7Q13308 1070 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 SPDYAQ5MJ70 313 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 TTC17Q96AE7 1141 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 CYTH2Q99418 400 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 PHACTR1Q9C0D0 580 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 PARP14Q460N5 1801 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 SPDYE16A6NNV3 312 aaPredicted RBP14.45□□□□□ -0.1
PHGDH-233ENST00000642021 E5RJQ4 531 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 APOC4-APOC2K7ER74 178 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 B4GALT5O43286 388 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 APOC2P02655 101 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 RFC5P40937 340 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 GCLCP48506 637 aaPredicted RBP14.45□□□□□ -0.1
PHGDH-233ENST00000642021 NEK3P51956 506 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms