RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 ZDHHC7Q9NXF8 308 aa10.01□□□□□ -0.81
PHGDH-228ENST00000641847 I3L4J1 428 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 CYB561D2O14569 222 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 ODC1P11926 461 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 KRT5P13647 590 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 ACO1P21399 889 aaKnown RBP10□□□□□ -0.81
PHGDH-228ENST00000641847 TGM1P22735 817 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 SOX5P35711 763 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 BRCC3P46736 316 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 AARSP49588 968 aaKnown RBP eCLIP10□□□□□ -0.81
PHGDH-228ENST00000641847 YWHAEP62258 255 aaKnown RBP10□□□□□ -0.81
PHGDH-228ENST00000641847 GPC5P78333 572 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 SHC2P98077 582 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 ARID5BQ14865 1188 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 ASIC2Q16515 512 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 SFMBT2Q5VUG0 894 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 E4F1Q66K89 784 aaPredicted RBP10□□□□□ -0.81
PHGDH-228ENST00000641847 CD300LGQ6UXG3 332 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 PDCL2Q8N4E4 241 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 TOP6BLQ8N6T0 577 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 UBR7Q8N806 425 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 APPL2Q8NEU8 664 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 SHC3Q92529 594 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 COL26A1Q96A83 441 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 SENP8Q96LD8 212 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 MMS19Q96T76 1030 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 DNAJC7Q99615 494 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 NUCKS1Q9H1E3 243 aaKnown RBP10□□□□□ -0.81
PHGDH-228ENST00000641847 CYP3A43Q9HB55 503 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 PARD6AQ9NPB6 346 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 CISHQ9NSE2 258 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 GDAP2Q9NXN4 497 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 MYO6Q9UM54 1294 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 L1RE1Q9UN81 338 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 FAN1Q9Y2M0 1017 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 PCDHB4Q9Y5E5 795 aa10□□□□□ -0.81
PHGDH-228ENST00000641847 DYNC1LI1Q9Y6G9 523 aaKnown RBP10□□□□□ -0.81
PHGDH-228ENST00000641847 FANCMQ8IYD8 2048 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 NBEAQ8NFP9 2946 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 CNOT1A5YKK6 2376 aaKnown RBP9.99□□□□□ -0.81
PHGDH-228ENST00000641847 HUS1O60921 280 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 TADA2AO75478 443 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 GFPT2O94808 682 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 C1RP00736 705 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 PROS1P07225 676 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 PAX3P23760 479 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 FSHRP23945 695 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 USP8P40818 1118 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 RPS9P46781 194 aaKnown RBP9.99□□□□□ -0.81
PHGDH-228ENST00000641847 CDH8P55286 799 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 ARID5AQ03989 594 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 INCA1Q0VD86 236 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 CSRP2Q16527 193 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 SOWAHAQ2M3V2 549 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 TSR1Q2NL82 804 aaKnown RBP9.99□□□□□ -0.81
PHGDH-228ENST00000641847 ZNF852Q6ZMS4 543 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 PRR23BQ6ZRT6 265 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 ADGRF2Q8IZF7 708 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 RBBP8NLQ8NC74 664 aaPredicted RBP9.99□□□□□ -0.81
PHGDH-228ENST00000641847 OR8K1Q8NGG5 319 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 FEZF2Q8TBJ5 459 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 BCL7CQ8WUZ0 217 aaPredicted RBP9.99□□□□□ -0.81
PHGDH-228ENST00000641847 NELL1Q92832 810 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 JAKMIP2Q96AA8 810 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 SUSD3Q96L08 255 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 PANX2Q96RD6 677 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 MRPL45Q9BRJ2 306 aaKnown RBP9.99□□□□□ -0.81
PHGDH-228ENST00000641847 DDX23Q9BUQ8 820 aaKnown RBP9.99□□□□□ -0.81
PHGDH-228ENST00000641847 FAM124BQ9H5Z6 455 aaPredicted RBP9.99□□□□□ -0.81
PHGDH-228ENST00000641847 LTB4R2Q9NPC1 389 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 SEMA4GQ9NTN9 838 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 HMGXB4Q9UGU5 601 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 ADAM28Q9UKQ2 775 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 PCDHB8Q9UN66 801 aa9.99□□□□□ -0.81
PHGDH-228ENST00000641847 SF3B1O75533 1304 aaKnown RBP eCLIP9.99□□□□□ -0.81
PHGDH-228ENST00000641847 DSPP15924 2871 aaKnown RBP9.99□□□□□ -0.81
PHGDH-228ENST00000641847 SETXQ7Z333 2677 aaKnown RBP9.99□□□□□ -0.81
PHGDH-228ENST00000641847 DENND4AQ7Z401 1863 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 ARHGEF37A1IGU5 675 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 M0QZQ0 153 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 FOXN3O00409 490 aaPredicted RBP9.98□□□□□ -0.81
PHGDH-228ENST00000641847 TEX28O15482 410 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 CYP26A1O43174 497 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 TRAPPC3O43617 180 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 LILRB3O75022 631 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 CILPO75339 1184 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 TACC1O75410 805 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 RFPL2O75678 378 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 SOD2P04179 222 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 FERP16591 822 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 WARSP23381 471 aaKnown RBP9.98□□□□□ -0.81
PHGDH-228ENST00000641847 GLUD2P49448 558 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 ZNF132P52740 706 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 CREMQ03060 361 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 ORC1Q13415 861 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 LPAL2Q16609 132 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 WSCD1Q658N2 575 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 FUT10Q6P4F1 479 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 TSSK4Q6SA08 328 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 TMEM270Q6UE05 265 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms