RNA–Protein interactions for RNA: ENST00000641721.1

MTHFR-213, Transcript of methylenetetrahydrofolate reductase, human

Gene MTHFR, Length 891 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MTHFR-213	ENST00000641721	VSTM1	Q6UX27	236 aa		11.36	□□□□□ -0.59
MTHFR-213	ENST00000641721	PRR23B	Q6ZRT6	265 aa		11.36	□□□□□ -0.59
MTHFR-213	ENST00000641721	SPEM1	Q8N4L4	309 aa		11.36	□□□□□ -0.59
MTHFR-213	ENST00000641721	FSIP1	Q8NA03	581 aa		11.36	□□□□□ -0.59
MTHFR-213	ENST00000641721	GOLGA5	Q8TBA6	731 aa		11.36	□□□□□ -0.59
MTHFR-213	ENST00000641721	SYAP1	Q96A49	352 aa	Predicted RBP	11.36	□□□□□ -0.59
MTHFR-213	ENST00000641721	EPC1	Q9H2F5	836 aa		11.36	□□□□□ -0.59
MTHFR-213	ENST00000641721	GOLPH3L	Q9H4A5	285 aa		11.36	□□□□□ -0.59
MTHFR-213	ENST00000641721	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	11.36	□□□□□ -0.59	1e-10	■■■■■ 190
MTHFR-213	ENST00000641721	MAPK8IP1	Q9UQF2	711 aa		11.36	□□□□□ -0.59
MTHFR-213	ENST00000641721	SCAMP3	O14828	347 aa	Known RBP	11.35	□□□□□ -0.59
MTHFR-213	ENST00000641721	TRIM66	O15016	1216 aa		11.35	□□□□□ -0.59
MTHFR-213	ENST00000641721	VNN1	O95497	513 aa		11.35	□□□□□ -0.59
MTHFR-213	ENST00000641721	STAU1	O95793	577 aa	Known RBP	11.35	□□□□□ -0.59
MTHFR-213	ENST00000641721	ABL1	P00519	1130 aa		11.35	□□□□□ -0.59
MTHFR-213	ENST00000641721	EGF	P01133	1207 aa		11.35	□□□□□ -0.59
MTHFR-213	ENST00000641721	PTPN1	P18031	435 aa	Known RBP	11.35	□□□□□ -0.59
MTHFR-213	ENST00000641721	ATIC	P31939	592 aa		11.35	□□□□□ -0.59
MTHFR-213	ENST00000641721	IFNAR2	P48551	515 aa		11.35	□□□□□ -0.59
MTHFR-213	ENST00000641721	PSMD2	Q13200	908 aa		11.35	□□□□□ -0.59
MTHFR-213	ENST00000641721	NCOA4	Q13772	614 aa		11.35	□□□□□ -0.59
MTHFR-213	ENST00000641721	ZNF667	Q5HYK9	610 aa		11.35	□□□□□ -0.59
MTHFR-213	ENST00000641721	SPOPL	Q6IQ16	392 aa		11.35	□□□□□ -0.59
MTHFR-213	ENST00000641721	FSTL4	Q6MZW2	842 aa		11.35	□□□□□ -0.59
MTHFR-213	ENST00000641721	B3GALNT2	Q8NCR0	500 aa		11.35	□□□□□ -0.59
MTHFR-213	ENST00000641721	SH3RF2	Q8TEC5	729 aa		11.35	□□□□□ -0.59
MTHFR-213	ENST00000641721	PARD3B	Q8TEW8	1205 aa		11.35	□□□□□ -0.59
MTHFR-213	ENST00000641721	SPATA17	Q96L03	361 aa		11.35	□□□□□ -0.59
MTHFR-213	ENST00000641721	MED10	Q9BTT4	135 aa		11.35	□□□□□ -0.59
MTHFR-213	ENST00000641721	B3GNT5	Q9BYG0	378 aa		11.35	□□□□□ -0.59
MTHFR-213	ENST00000641721	FAM126A	Q9BYI3	521 aa	Predicted RBP	11.35	□□□□□ -0.59
MTHFR-213	ENST00000641721	SDCBP2	Q9H190	292 aa		11.35	□□□□□ -0.59
MTHFR-213	ENST00000641721	MMRN2	Q9H8L6	949 aa		11.35	□□□□□ -0.59
MTHFR-213	ENST00000641721	DUS2	Q9NX74	493 aa	Known RBP	11.35	□□□□□ -0.59
MTHFR-213	ENST00000641721	GCNT4	Q9P109	453 aa		11.35	□□□□□ -0.59
MTHFR-213	ENST00000641721	USP25	Q9UHP3	1055 aa		11.35	□□□□□ -0.59
MTHFR-213	ENST00000641721	SPAG17	Q6Q759	2223 aa		11.35	□□□□□ -0.59
MTHFR-213	ENST00000641721	RIF1	Q5UIP0	2472 aa	Known RBP	11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	GVINP1	Q7Z2Y8	2422 aa		11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	OTOGL	Q3ZCN5	2332 aa		11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	SOBP	A7XYQ1	873 aa		11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721		K7ESF4	209 aa		11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	PDXK	O00764	312 aa		11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	CALU	O43852	315 aa	Predicted RBP	11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	RNF40	O75150	1001 aa		11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	C4BPA	P04003	597 aa	Known RBP	11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	TRIM49	P0CI25	452 aa		11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	TRIM49C	P0CI26	452 aa		11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	HDC	P19113	662 aa		11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	GJA4	P35212	333 aa		11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	PIK3CA	P42336	1068 aa		11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	NRL	P54845	237 aa		11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	PDGFRL	Q15198	375 aa		11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	TMEM196	Q5HYL7	178 aa		11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	KRBA2	Q6ZNG9	492 aa		11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	FAM35A	Q86V20	835 aa		11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	SLC9A9	Q8IVB4	645 aa		11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	CPA6	Q8N4T0	437 aa		11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	OSCP1	Q8WVF1	389 aa		11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	CCDC47	Q96A33	483 aa	Known RBP	11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	C8orf48	Q96LL4	319 aa		11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	ELOVL4	Q9GZR5	314 aa		11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	ECT2	Q9H8V3	914 aa		11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	FBRSL1	Q9HCM7	1045 aa	Known RBP	11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	POLR3B	Q9NW08	1133 aa	Predicted RBP	11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	DMAC2	Q9NW81	257 aa		11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	TRPM5	Q9NZQ8	1165 aa		11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	HMGXB4	Q9UGU5	601 aa		11.34	□□□□□ -0.59
MTHFR-213	ENST00000641721	CEP192	Q8TEP8	1941 aa		11.33	□□□□□ -0.6
MTHFR-213	ENST00000641721	LEFTY2	O00292	366 aa		11.33	□□□□□ -0.6
MTHFR-213	ENST00000641721	MYL1	P05976	194 aa		11.33	□□□□□ -0.6
MTHFR-213	ENST00000641721	CCDC130	P13994	396 aa		11.33	□□□□□ -0.6
MTHFR-213	ENST00000641721	NR2F2	P24468	414 aa		11.33	□□□□□ -0.6
MTHFR-213	ENST00000641721	PXN	P49023	591 aa	Predicted RBP	11.33	□□□□□ -0.6
MTHFR-213	ENST00000641721	AP3M2	P53677	418 aa		11.33	□□□□□ -0.6
MTHFR-213	ENST00000641721	NOP14	P78316	857 aa	Known RBP	11.33	□□□□□ -0.6
MTHFR-213	ENST00000641721	CLDN10	P78369	228 aa		11.33	□□□□□ -0.6
MTHFR-213	ENST00000641721	ZXDB	P98169	803 aa		11.33	□□□□□ -0.6
MTHFR-213	ENST00000641721	GRSF1	Q12849	480 aa	Known RBP eCLIP	11.33	□□□□□ -0.6
MTHFR-213	ENST00000641721	DPYD	Q12882	1025 aa		11.33	□□□□□ -0.6
MTHFR-213	ENST00000641721	TAF10	Q12962	218 aa		11.33	□□□□□ -0.6
MTHFR-213	ENST00000641721	EML3	Q32P44	896 aa		11.33	□□□□□ -0.6
MTHFR-213	ENST00000641721	ACOT1	Q86TX2	421 aa		11.33	□□□□□ -0.6
MTHFR-213	ENST00000641721	ATP2A3	Q93084	1043 aa		11.33	□□□□□ -0.6
MTHFR-213	ENST00000641721	RMDN1	Q96DB5	314 aa		11.33	□□□□□ -0.6
MTHFR-213	ENST00000641721	KCNK16	Q96T55	309 aa		11.33	□□□□□ -0.6
MTHFR-213	ENST00000641721	P2RY13	Q9BPV8	354 aa		11.33	□□□□□ -0.6
MTHFR-213	ENST00000641721	TTLL2	Q9BWV7	592 aa		11.33	□□□□□ -0.6
MTHFR-213	ENST00000641721	VRTN	Q9H8Y1	702 aa		11.33	□□□□□ -0.6
MTHFR-213	ENST00000641721	KRT82	Q9NSB4	513 aa		11.33	□□□□□ -0.6
MTHFR-213	ENST00000641721	SMPD4	Q9NXE4	827 aa		11.33	□□□□□ -0.6
MTHFR-213	ENST00000641721	GMEB2	Q9UKD1	530 aa		11.33	□□□□□ -0.6
MTHFR-213	ENST00000641721	RAB23	Q9ULC3	237 aa		11.33	□□□□□ -0.6
MTHFR-213	ENST00000641721	FRMD4B	Q9Y2L6	1034 aa		11.33	□□□□□ -0.6
MTHFR-213	ENST00000641721	CPQ	Q9Y646	472 aa		11.33	□□□□□ -0.6
MTHFR-213	ENST00000641721	ATP8B3	O60423	1300 aa		11.33	□□□□□ -0.6
MTHFR-213	ENST00000641721	FAM237A	A0A1B0GTK4	181 aa		11.32	□□□□□ -0.6
MTHFR-213	ENST00000641721	ZNF840P	A6NDX5	716 aa		11.32	□□□□□ -0.6
MTHFR-213	ENST00000641721	TRDMT1	O14717	391 aa	Known RBP	11.32	□□□□□ -0.6
MTHFR-213	ENST00000641721	RHOBTB3	O94955	611 aa		11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms