RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 RFPL2O75678 378 aa22.8■■□□□ 1.24
TSPAN9-208ENST00000640568 HNRNPA1P09651 372 aaKnown RBP eCLIP22.8■■□□□ 1.24
TSPAN9-208ENST00000640568 SKILP12757 684 aa22.8■■□□□ 1.24
TSPAN9-208ENST00000640568 PDE4CQ08493 712 aa22.8■■□□□ 1.24
TSPAN9-208ENST00000640568 SDHAF4Q5VUM1 108 aa22.8■■□□□ 1.24
TSPAN9-208ENST00000640568 ANKRD54Q6NXT1 300 aa22.8■■□□□ 1.24
TSPAN9-208ENST00000640568 DENND1BQ6P3S1 775 aa22.8■■□□□ 1.24
TSPAN9-208ENST00000640568 ITIH5Q86UX2 942 aa22.8■■□□□ 1.24
TSPAN9-208ENST00000640568 VPS36Q86VN1 386 aa22.8■■□□□ 1.24
TSPAN9-208ENST00000640568 GIPC2Q8TF65 315 aa22.8■■□□□ 1.24
TSPAN9-208ENST00000640568 DDX1Q92499 740 aaKnown RBP22.8■■□□□ 1.24
TSPAN9-208ENST00000640568 SECISBP2LQ93073 1101 aaKnown RBP22.8■■□□□ 1.24
TSPAN9-208ENST00000640568 CSNK1G1Q9HCP0 422 aa22.8■■□□□ 1.24
TSPAN9-208ENST00000640568 ZNF638Q14966 1978 aaKnown RBP22.8■■□□□ 1.24
TSPAN9-208ENST00000640568 XPO1O14980 1071 aaKnown RBP22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 BEST1O76090 585 aa22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 ATF6P18850 670 aa22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 TNFAIP3P21580 790 aa22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 TC2NQ8N9U0 490 aa22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 SPATA17Q96L03 361 aa22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 CEP295NLQ96MC4 621 aa22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 ZNF512Q96ME7 567 aaPredicted RBP22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 NOX5Q96PH1 765 aa22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 PIDD1Q9HB75 910 aa22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 PNPLA8Q9NP80 782 aa22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 CCDC195A0A1B0GUA6 201 aa22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 CFHP08603 1231 aa22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 HOXB8P17481 243 aaPredicted RBP22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 HNRNPH3P31942 346 aaKnown RBP22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 FMO1Q01740 532 aa22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 ARID5BQ14865 1188 aa22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 CTC1Q2NKJ3 1217 aa22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 PKDCCQ504Y2 493 aa22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 RARS2Q5T160 578 aaKnown RBP22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 TRIM72Q6ZMU5 477 aa22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 DENND5BQ6ZUT9 1274 aa22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 C12orf76Q8N812 135 aaPredicted RBP22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 TMEM35BQ8NCS4 154 aa22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 ZMIZ2Q8NF64 920 aa22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 GPR152Q8TDT2 470 aa22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 LHX5Q9H2C1 402 aa22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 TMEM30AQ9NV96 361 aa22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 EHD2Q9NZN4 543 aa22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 ASB3Q9Y575 518 aa22.79■■□□□ 1.24
TSPAN9-208ENST00000640568 C2orf16Q68DN1 1984 aa22.78■■□□□ 1.24
TSPAN9-208ENST00000640568 CSH1P0DML2 217 aa22.78■■□□□ 1.24
TSPAN9-208ENST00000640568 CSH2P0DML3 217 aa22.78■■□□□ 1.24
TSPAN9-208ENST00000640568 PLA2G4AP47712 749 aa22.78■■□□□ 1.24
TSPAN9-208ENST00000640568 GSDMDP57764 484 aa22.78■■□□□ 1.24
TSPAN9-208ENST00000640568 IFRD2Q12894 506 aaPredicted RBP22.78■■□□□ 1.24
TSPAN9-208ENST00000640568 TMC5Q6UXY8 1006 aa22.78■■□□□ 1.24
TSPAN9-208ENST00000640568 PIGZQ86VD9 579 aa22.78■■□□□ 1.24
TSPAN9-208ENST00000640568 NUP93Q8N1F7 819 aa22.78■■□□□ 1.24
TSPAN9-208ENST00000640568 C1orf131Q8NDD1 294 aaKnown RBP22.78■■□□□ 1.24
TSPAN9-208ENST00000640568 PRKD2Q9BZL6 878 aa22.78■■□□□ 1.24
TSPAN9-208ENST00000640568 UBXN6Q9BZV1 441 aa22.78■■□□□ 1.24
TSPAN9-208ENST00000640568 DEF6Q9H4E7 631 aa22.78■■□□□ 1.24
TSPAN9-208ENST00000640568 LRRC4Q9HBW1 653 aa22.78■■□□□ 1.24
TSPAN9-208ENST00000640568 ST7Q9NRC1 585 aa22.78■■□□□ 1.24
TSPAN9-208ENST00000640568 MAGED2Q9UNF1 606 aaPredicted RBP22.78■■□□□ 1.24
TSPAN9-208ENST00000640568 SLC38A8A6NNN8 435 aa22.77■■□□□ 1.24
TSPAN9-208ENST00000640568 TBX10O75333 385 aa22.77■■□□□ 1.24
TSPAN9-208ENST00000640568 LSM8O95777 96 aaKnown RBP22.77■■□□□ 1.24
TSPAN9-208ENST00000640568 GPD2P43304 727 aa22.77■■□□□ 1.24
TSPAN9-208ENST00000640568 SLC5A3P53794 718 aa22.77■■□□□ 1.24
TSPAN9-208ENST00000640568 HGSNATQ68CP4 663 aa22.77■■□□□ 1.24
TSPAN9-208ENST00000640568 ZNF571Q7Z3V5 609 aaPredicted RBP22.77■■□□□ 1.24
TSPAN9-208ENST00000640568 STKLD1Q8NE28 680 aa22.77■■□□□ 1.24
TSPAN9-208ENST00000640568 CMASQ8NFW8 434 aaPredicted RBP22.77■■□□□ 1.24
TSPAN9-208ENST00000640568 PSMG2Q969U7 264 aa22.77■■□□□ 1.24
TSPAN9-208ENST00000640568 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.77■■□□□ 1.24
TSPAN9-208ENST00000640568 APOL5Q9BWW9 433 aa22.77■■□□□ 1.24
TSPAN9-208ENST00000640568 TULP2O00295 520 aa22.76■■□□□ 1.23
TSPAN9-208ENST00000640568 RTN3O95197 1032 aaPredicted RBP22.76■■□□□ 1.23
TSPAN9-208ENST00000640568 CHRNB2P17787 502 aa22.76■■□□□ 1.23
TSPAN9-208ENST00000640568 RGS7P49802 495 aa22.76■■□□□ 1.23
TSPAN9-208ENST00000640568 CES5AQ6NT32 575 aa22.76■■□□□ 1.23
TSPAN9-208ENST00000640568 MSANTD4Q8NCY6 345 aa22.76■■□□□ 1.23
TSPAN9-208ENST00000640568 SLC35F5Q8WV83 523 aa22.76■■□□□ 1.23
TSPAN9-208ENST00000640568 SMG7Q92540 1137 aaKnown RBP22.76■■□□□ 1.23
TSPAN9-208ENST00000640568 HSFY1Q96LI6 401 aa22.76■■□□□ 1.23
TSPAN9-208ENST00000640568 PANX2Q96RD6 677 aa22.76■■□□□ 1.23
TSPAN9-208ENST00000640568 CLEC1BQ9P126 229 aa22.76■■□□□ 1.23
TSPAN9-208ENST00000640568 REV3LO60673 3130 aa22.75■■□□□ 1.23
TSPAN9-208ENST00000640568 POU2F2P09086 479 aa22.75■■□□□ 1.23
TSPAN9-208ENST00000640568 SNX16P57768 344 aa22.75■■□□□ 1.23
TSPAN9-208ENST00000640568 DLX2Q07687 328 aaPredicted RBP22.75■■□□□ 1.23
TSPAN9-208ENST00000640568 COL19A1Q14993 1142 aa22.75■■□□□ 1.23
TSPAN9-208ENST00000640568 NAA35Q5VZE5 725 aa22.75■■□□□ 1.23
TSPAN9-208ENST00000640568 WDR59Q6PJI9 974 aa22.75■■□□□ 1.23
TSPAN9-208ENST00000640568 DNAJB7Q7Z6W7 309 aaPredicted RBP22.75■■□□□ 1.23
TSPAN9-208ENST00000640568 SIX6OS1Q8N1H7 587 aa22.75■■□□□ 1.23
TSPAN9-208ENST00000640568 IPO4Q8TEX9 1081 aaKnown RBP22.75■■□□□ 1.23
TSPAN9-208ENST00000640568 FBXO44Q9H4M3 255 aa22.75■■□□□ 1.23
TSPAN9-208ENST00000640568 SYNCQ9H7C4 482 aa22.75■■□□□ 1.23
TSPAN9-208ENST00000640568 ASAH2Q9NR71 780 aa22.75■■□□□ 1.23
TSPAN9-208ENST00000640568 ARHGAP20Q9P2F6 1191 aa22.75■■□□□ 1.23
TSPAN9-208ENST00000640568 UXTQ9UBK9 157 aaPredicted RBP22.75■■□□□ 1.23
TSPAN9-208ENST00000640568 PLEKP08567 350 aaPredicted RBP22.74■■□□□ 1.23
TSPAN9-208ENST00000640568 PTPN2P17706 415 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms