RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 IZUMO3Q5VZ72 239 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 ZDHHC24Q6UX98 284 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 MFSD7Q6UXD7 560 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 BBS12Q6ZW61 710 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 SERINC5Q86VE9 423 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 METTL23Q86XA0 190 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 SPATS2Q86XZ4 545 aaKnown RBP8.72□□□□□ -1.01
PNKP-231ENST00000640501 RFX6Q8HWS3 928 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 UBA3Q8TBC4 463 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 CFAP57Q96MR6 1250 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 UROC1Q96N76 676 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 TWNKQ96RR1 684 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 MRPL45Q9BRJ2 306 aaKnown RBP8.72□□□□□ -1.01
PNKP-231ENST00000640501 CALN1Q9BXU9 219 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 SLC4A5Q9BY07 1137 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 FRMD8Q9BZ67 464 aaPredicted RBP8.72□□□□□ -1.01
PNKP-231ENST00000640501 NEUROG2Q9H2A3 272 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 ZWILCHQ9H900 591 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 CHST7Q9NS84 486 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 FAM105AQ9NUU6 356 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 BCCIPQ9P287 314 aaKnown RBP eCLIP8.72□□□□□ -1.01
PNKP-231ENST00000640501 HMGXB4Q9UGU5 601 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 DSEQ9UL01 958 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 STAP1Q9ULZ2 295 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 TCRBV7S2A1N4TA0A589 114 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 C2CD4BA6NLJ0 364 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 PI4K2BG5E9Z4 385 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 XPO1O14980 1071 aaKnown RBP8.71□□□□□ -1.02
PNKP-231ENST00000640501 MDM4O15151 490 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 MEFVO15553 781 aaPredicted RBP8.71□□□□□ -1.02
PNKP-231ENST00000640501 RIPK2O43353 540 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 FBXO21O94952 628 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 ODC1P11926 461 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 TGM2P21980 687 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 PCSK1P29120 753 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 MIPP30301 263 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 PHBP35232 272 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 ARSEP51690 589 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 ITGA8P53708 1063 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 PPP2R2AP63151 447 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 SP3Q02447 781 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 ZNF252P-AS1Q0IIN9 211 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 NR1H3Q13133 447 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 PTK7Q13308 1070 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 ORC1Q13415 861 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 MAPRE1Q15691 268 aaKnown RBP8.71□□□□□ -1.02
PNKP-231ENST00000640501 ZSCAN26Q16670 478 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 SOWAHAQ2M3V2 549 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 P3H1Q32P28 736 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 TTMPQ5BVD1 217 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 GLRA4Q5JXX5 417 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 UBXN11Q5T124 520 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 LLGL2Q6P1M3 1020 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 CXCL17Q6UXB2 119 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 DSTYKQ6XUX3 929 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 FAM183BPQ6ZVS7 135 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 CENPUQ71F23 418 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 SLC26A9Q7LBE3 791 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 FAM228AQ86W67 206 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 RELL1Q8IUW5 271 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 PSTKQ8IV42 348 aaKnown RBP8.71□□□□□ -1.02
PNKP-231ENST00000640501 RIBC1Q8N443 379 aaPredicted RBP8.71□□□□□ -1.02
PNKP-231ENST00000640501 ALLCQ8N6M5 410 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 CMASQ8NFW8 434 aaPredicted RBP8.71□□□□□ -1.02
PNKP-231ENST00000640501 JOSD2Q8TAC2 188 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 SLC35F5Q8WV83 523 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 RXFP2Q8WXD0 754 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 ATG4AQ8WYN0 398 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 RIN2Q8WYP3 895 aaPredicted RBP8.71□□□□□ -1.02
PNKP-231ENST00000640501 PIK3R5Q8WYR1 880 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 HSPH1Q92598 858 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 P3H4Q92791 437 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 C18orf25Q96B23 403 aaPredicted RBP8.71□□□□□ -1.02
PNKP-231ENST00000640501 ZMAT2Q96NC0 199 aaKnown RBP8.71□□□□□ -1.02
PNKP-231ENST00000640501 SERPINB12Q96P63 405 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 TXLNGYQ9BZA5 131 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 TSPYL2Q9H2G4 693 aaPredicted RBP8.71□□□□□ -1.02
PNKP-231ENST00000640501 CDHR5Q9HBB8 845 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 LRRC4Q9HBW1 653 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 GPBP1L1Q9HC44 474 aaPredicted RBP8.71□□□□□ -1.02
PNKP-231ENST00000640501 FAM49BQ9NUQ9 324 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 RRN3Q9NYV6 651 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 CYTH4Q9UIA0 394 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 TPX2Q9ULW0 747 aaKnown RBP8.71□□□□□ -1.02
PNKP-231ENST00000640501 ST3GAL5Q9UNP4 418 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 SHOC2Q9UQ13 582 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 HES2Q9Y543 173 aa8.71□□□□□ -1.02
PNKP-231ENST00000640501 SCN10AQ9Y5Y9 1956 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 MOXD2PA6NHM9 499 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 H0YGN5 161 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 CYB561D2O14569 222 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 DNALI1O14645 258 aaPredicted RBP8.7□□□□□ -1.02
PNKP-231ENST00000640501 RASGRF2O14827 1237 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 EIF3HO15372 352 aaKnown RBP eCLIP8.7□□□□□ -1.02
PNKP-231ENST00000640501 CST8O60676 142 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 ZNF623O75123 536 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 GJB6O95452 261 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 ASGR1P07306 291 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 FAM200BP0CF97 657 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 KRT10P13645 584 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms