RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 GOLGA8NF8WBI6 632 aa14.18□□□□□ -0.14
SCARB2-215ENST00000639145 SCAMP3O14828 347 aaKnown RBP14.18□□□□□ -0.14
SCARB2-215ENST00000639145 MAPK13O15264 365 aa14.18□□□□□ -0.14
SCARB2-215ENST00000639145 ESRRBO95718 433 aa14.18□□□□□ -0.14
SCARB2-215ENST00000639145 ART3Q13508 389 aa14.18□□□□□ -0.14
SCARB2-215ENST00000639145 ECM1Q16610 540 aa14.18□□□□□ -0.14
SCARB2-215ENST00000639145 NT5DC1Q5TFE4 455 aa14.18□□□□□ -0.14
SCARB2-215ENST00000639145 CARNMT1Q8N4J0 409 aa14.18□□□□□ -0.14
SCARB2-215ENST00000639145 RAB3IPQ96QF0 476 aaPredicted RBP14.18□□□□□ -0.14
SCARB2-215ENST00000639145 SUN2Q9UH99 717 aa14.18□□□□□ -0.14
SCARB2-215ENST00000639145 NOL3O60936 208 aaKnown RBP14.17□□□□□ -0.14
SCARB2-215ENST00000639145 GJB6O95452 261 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 ADRB2P07550 413 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 SETSIPP0DME0 302 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 NFIL3Q16649 462 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 REXO1L1PQ8IX06 675 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 MRPL9Q9BYD2 267 aaKnown RBP14.17□□□□□ -0.14
SCARB2-215ENST00000639145 USP18Q9UMW8 372 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 FAM47DPA6NHR8 397 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 DIAPH2O60879 1101 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 ESRRAP11474 423 aaPredicted RBP14.17□□□□□ -0.14
SCARB2-215ENST00000639145 KCNA4P22459 653 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 ITGA8P53708 1063 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 GCNT1Q02742 428 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 IMPG1Q17R60 797 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 SDE2Q6IQ49 451 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 C3orf62Q6ZUJ4 267 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 ZBTB10Q96DT7 871 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 RSRC1Q96IZ7 334 aaKnown RBP14.17□□□□□ -0.14
SCARB2-215ENST00000639145 C20orf96Q9NUD7 363 aaPredicted RBP14.17□□□□□ -0.14
SCARB2-215ENST00000639145 VPS28Q9UK41 221 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 TNFSF13BQ9Y275 285 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 SYF2O95926 243 aaKnown RBP14.17□□□□□ -0.14
SCARB2-215ENST00000639145 JCHAINP01591 159 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 HADHAP40939 763 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 PTENP60484 403 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 GTF2BQ00403 316 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 ITGA7Q13683 1181 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 OR2W6PQ8NHA6 318 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 TFB1MQ8WVM0 346 aaKnown RBP14.17□□□□□ -0.14
SCARB2-215ENST00000639145 ERP44Q9BS26 406 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 ATXN3LQ9H3M9 355 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 TMEM134Q9H6X4 195 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 SMYD3Q9H7B4 428 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 ZNF263O14978 683 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 TLR2O60603 784 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 HMGCRP04035 888 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 CCDC130P13994 396 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 USP10Q14694 798 aaKnown RBP14.17□□□□□ -0.14
SCARB2-215ENST00000639145 LONRF1Q17RB8 773 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 TFAP2DQ7Z6R9 452 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 HELQQ8TDG4 1101 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 BLOC1S5Q8TDH9 187 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 CINPQ9BW66 212 aaPredicted RBP14.17□□□□□ -0.14
SCARB2-215ENST00000639145 PCDHB8Q9UN66 801 aa14.17□□□□□ -0.14
SCARB2-215ENST00000639145 NT5C1B-RDH14C9J2C7 533 aa14.16□□□□□ -0.14
SCARB2-215ENST00000639145 KLRC4O43908 158 aa14.16□□□□□ -0.14
SCARB2-215ENST00000639145 PROSCO94903 275 aa14.16□□□□□ -0.14
SCARB2-215ENST00000639145 FBXO21O94952 628 aa14.16□□□□□ -0.14
SCARB2-215ENST00000639145 CSE1LP55060 971 aaKnown RBP14.16□□□□□ -0.14
SCARB2-215ENST00000639145 YWHAZP63104 245 aaKnown RBP14.16□□□□□ -0.14
SCARB2-215ENST00000639145 JAG1P78504 1218 aa14.16□□□□□ -0.14
SCARB2-215ENST00000639145 SATB1Q01826 763 aa14.16□□□□□ -0.14
SCARB2-215ENST00000639145 CLEC16AQ2KHT3 1053 aa14.16□□□□□ -0.14
SCARB2-215ENST00000639145 C4orf33Q8N1A6 199 aa14.16□□□□□ -0.14
SCARB2-215ENST00000639145 GPR20Q99678 358 aa14.16□□□□□ -0.14
SCARB2-215ENST00000639145 SYNDIG1Q9H7V2 258 aa14.16□□□□□ -0.14
SCARB2-215ENST00000639145 ARHGEF38Q9NXL2 777 aa14.16□□□□□ -0.14
SCARB2-215ENST00000639145 COILP38432 576 aaPredicted RBP14.16□□□□□ -0.14
SCARB2-215ENST00000639145 OTUD4Q01804 1114 aaKnown RBP14.16□□□□□ -0.14
SCARB2-215ENST00000639145 PHLDB3Q6NSJ2 640 aa14.16□□□□□ -0.14
SCARB2-215ENST00000639145 SYDE1Q6ZW31 735 aaPredicted RBP14.16□□□□□ -0.14
SCARB2-215ENST00000639145 OR5B17Q8NGF7 314 aa14.16□□□□□ -0.14
SCARB2-215ENST00000639145 SNX19Q92543 992 aa14.16□□□□□ -0.14
SCARB2-215ENST00000639145 CELF6Q96J87 481 aaKnown RBP14.16□□□□□ -0.14
SCARB2-215ENST00000639145 ADAM21Q9UKJ8 722 aa14.16□□□□□ -0.14
SCARB2-215ENST00000639145 CBX4O00257 560 aa14.16□□□□□ -0.14
SCARB2-215ENST00000639145 MTSS1O43312 755 aa14.16□□□□□ -0.14
SCARB2-215ENST00000639145 LSM8O95777 96 aaKnown RBP14.16□□□□□ -0.14
SCARB2-215ENST00000639145 STAT4Q14765 748 aa14.16□□□□□ -0.14
SCARB2-215ENST00000639145 HIPK4Q8NE63 616 aa14.16□□□□□ -0.14
SCARB2-215ENST00000639145 STX7O15400 261 aaKnown RBP14.15□□□□□ -0.14
SCARB2-215ENST00000639145 TTC4O95801 387 aa14.15□□□□□ -0.14
SCARB2-215ENST00000639145 ARF4P18085 180 aaPredicted RBP14.15□□□□□ -0.14
SCARB2-215ENST00000639145 LBRQ14739 615 aaKnown RBP14.15□□□□□ -0.14
SCARB2-215ENST00000639145 ABHD15Q6UXT9 468 aa14.15□□□□□ -0.14
SCARB2-215ENST00000639145 MCOLN2Q8IZK6 566 aa14.15□□□□□ -0.14
SCARB2-215ENST00000639145 UBE2Q2Q8WVN8 375 aa14.15□□□□□ -0.14
SCARB2-215ENST00000639145 DMAP1Q9NPF5 467 aaPredicted RBP14.15□□□□□ -0.14
SCARB2-215ENST00000639145 CHST12Q9NRB3 414 aa14.15□□□□□ -0.14
SCARB2-215ENST00000639145 KIAA0100Q14667 2235 aaKnown RBP14.15□□□□□ -0.14
SCARB2-215ENST00000639145 RRP1BQ14684 758 aaKnown RBP14.15□□□□□ -0.14
SCARB2-215ENST00000639145 RABGAP1LQ5R372 815 aa14.15□□□□□ -0.14
SCARB2-215ENST00000639145 HS6ST3Q8IZP7 471 aa14.15□□□□□ -0.14
SCARB2-215ENST00000639145 SH2D3CQ8N5H7 860 aa14.15□□□□□ -0.14
SCARB2-215ENST00000639145 TRABDQ9H4I3 376 aa14.15□□□□□ -0.14
SCARB2-215ENST00000639145 APOBEC2Q9Y235 224 aaKnown RBP14.15□□□□□ -0.14
SCARB2-215ENST00000639145 CCDC85CA6NKD9 419 aa14.15□□□□□ -0.14
SCARB2-215ENST00000639145 MICAL2O94851 1124 aa14.15□□□□□ -0.14
SCARB2-215ENST00000639145 ASGR1P07306 291 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms