RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 WNT3P56703 355 aa4.44□□□□□ -1.7
CCDC7-211ENST00000638889 MYO1EQ12965 1108 aa4.44□□□□□ -1.7
CCDC7-211ENST00000638889 CCDC157Q569K6 752 aa4.44□□□□□ -1.7
CCDC7-211ENST00000638889 KHDC1LQ5JSQ8 128 aa4.44□□□□□ -1.7
CCDC7-211ENST00000638889 L1TD1Q5T7N2 865 aaKnown RBP4.44□□□□□ -1.7
CCDC7-211ENST00000638889 SLC15A3Q8IY34 581 aa4.44□□□□□ -1.7
CCDC7-211ENST00000638889 ADAMTS18Q8TE60 1221 aa4.44□□□□□ -1.7
CCDC7-211ENST00000638889 OSCP1Q8WVF1 389 aa4.44□□□□□ -1.7
CCDC7-211ENST00000638889 MTFMTQ96DP5 389 aaKnown RBP4.44□□□□□ -1.7
CCDC7-211ENST00000638889 VCPIP1Q96JH7 1222 aa4.44□□□□□ -1.7
CCDC7-211ENST00000638889 DPCDQ9BVM2 203 aaPredicted RBP4.44□□□□□ -1.7
CCDC7-211ENST00000638889 CIPCQ9C0C6 399 aa4.44□□□□□ -1.7
CCDC7-211ENST00000638889 TRMT13Q9NUP7 481 aaKnown RBP4.44□□□□□ -1.7
CCDC7-211ENST00000638889 TCRBV5S1A1TA0A578 114 aa4.43□□□□□ -1.7
CCDC7-211ENST00000638889 A1BGP04217 495 aa4.43□□□□□ -1.7
CCDC7-211ENST00000638889 CCKARP32238 428 aa4.43□□□□□ -1.7
CCDC7-211ENST00000638889 FAM50AQ14320 339 aaKnown RBP4.43□□□□□ -1.7
CCDC7-211ENST00000638889 LRRC41Q15345 812 aa4.43□□□□□ -1.7
CCDC7-211ENST00000638889 FAM187BQ17R55 369 aa4.43□□□□□ -1.7
CCDC7-211ENST00000638889 TMEM63BQ5T3F8 832 aa4.43□□□□□ -1.7
CCDC7-211ENST00000638889 SHC4Q6S5L8 630 aa4.43□□□□□ -1.7
CCDC7-211ENST00000638889 IRF2BP2Q7Z5L9 587 aa4.43□□□□□ -1.7
CCDC7-211ENST00000638889 ABRAQ8N0Z2 381 aa4.43□□□□□ -1.7
CCDC7-211ENST00000638889 ZNF398Q8TD17 642 aa4.43□□□□□ -1.7
CCDC7-211ENST00000638889 CUL5Q93034 780 aa4.43□□□□□ -1.7
CCDC7-211ENST00000638889 MESP1Q9BRJ9 268 aa4.43□□□□□ -1.7
CCDC7-211ENST00000638889 MED16Q9Y2X0 877 aa4.43□□□□□ -1.7
CCDC7-211ENST00000638889 TMX2Q9Y320 296 aa4.43□□□□□ -1.7
CCDC7-211ENST00000638889 FAM90A10PA6NDY2 464 aa4.42□□□□□ -1.7
CCDC7-211ENST00000638889 TMEM232C9JQI7 657 aa4.42□□□□□ -1.7
CCDC7-211ENST00000638889 hCG_1984214I3L0E3 225 aa4.42□□□□□ -1.7
CCDC7-211ENST00000638889 VCAM1P19320 739 aa4.42□□□□□ -1.7
CCDC7-211ENST00000638889 KRTAP10-7P60409 375 aaPredicted RBP4.42□□□□□ -1.7
CCDC7-211ENST00000638889 GHRHRQ02643 423 aa4.42□□□□□ -1.7
CCDC7-211ENST00000638889 ZNF268Q14587 947 aaPredicted RBP4.42□□□□□ -1.7
CCDC7-211ENST00000638889 CYP1B1Q16678 543 aa4.42□□□□□ -1.7
CCDC7-211ENST00000638889 MGAT5BQ3V5L5 792 aa4.42□□□□□ -1.7
CCDC7-211ENST00000638889 RNASE12Q5GAN4 147 aaKnown RBP4.42□□□□□ -1.7
CCDC7-211ENST00000638889 C10orf25Q5T742 122 aa4.42□□□□□ -1.7
CCDC7-211ENST00000638889 DEPDC1Q5TB30 811 aa4.42□□□□□ -1.7
CCDC7-211ENST00000638889 CAND1Q86VP6 1230 aaKnown RBP4.42□□□□□ -1.7
CCDC7-211ENST00000638889 SFTPA1Q8IWL2 248 aa4.42□□□□□ -1.7
CCDC7-211ENST00000638889 IZUMO1Q8IYV9 350 aa4.42□□□□□ -1.7
CCDC7-211ENST00000638889 NRACQ8N912 160 aa4.42□□□□□ -1.7
CCDC7-211ENST00000638889 MVB12AQ96EY5 273 aa4.42□□□□□ -1.7
CCDC7-211ENST00000638889 ASPSCR1Q9BZE9 553 aa4.42□□□□□ -1.7
CCDC7-211ENST00000638889 CXorf36Q9H7Y0 433 aa4.42□□□□□ -1.7
CCDC7-211ENST00000638889 PCDHA6Q9UN73 950 aa4.42□□□□□ -1.7
CCDC7-211ENST00000638889 MRPS17Q9Y2R5 130 aaKnown RBP4.42□□□□□ -1.7
CCDC7-211ENST00000638889 CNTNAP2Q9UHC6 1331 aa4.42□□□□□ -1.7
CCDC7-211ENST00000638889 LY6G6EA0A0G2JKS1 128 aa4.41□□□□□ -1.7
CCDC7-211ENST00000638889 MYO1CO00159 1063 aa4.41□□□□□ -1.7
CCDC7-211ENST00000638889 OAZ2O95190 189 aa4.41□□□□□ -1.7
CCDC7-211ENST00000638889 IL33O95760 270 aa4.41□□□□□ -1.7
CCDC7-211ENST00000638889 PHKG2P15735 406 aa4.41□□□□□ -1.7
CCDC7-211ENST00000638889 ALDH5A1P51649 535 aaPredicted RBP4.41□□□□□ -1.7
CCDC7-211ENST00000638889 DGKEP52429 567 aa4.41□□□□□ -1.7
CCDC7-211ENST00000638889 LINC00205P59089 165 aa4.41□□□□□ -1.7
CCDC7-211ENST00000638889 KRTAP10-6P60371 365 aaPredicted RBP4.41□□□□□ -1.7
CCDC7-211ENST00000638889 E2F1Q01094 437 aa4.41□□□□□ -1.7
CCDC7-211ENST00000638889 AMPD3Q01432 767 aa4.41□□□□□ -1.7
CCDC7-211ENST00000638889 RBMS2Q15434 407 aaKnown RBP4.41□□□□□ -1.7
CCDC7-211ENST00000638889 MIDNQ504T8 468 aa4.41□□□□□ -1.7
CCDC7-211ENST00000638889 BCDIN3DQ7Z5W3 292 aaKnown RBP4.41□□□□□ -1.7
CCDC7-211ENST00000638889 CATIPQ7Z7H3 387 aa4.41□□□□□ -1.7
CCDC7-211ENST00000638889 GAS2L3Q86XJ1 694 aa4.41□□□□□ -1.7
CCDC7-211ENST00000638889 SIRT6Q8N6T7 355 aa4.41□□□□□ -1.7
CCDC7-211ENST00000638889 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.41□□□□□ -1.7
CCDC7-211ENST00000638889 CCDC17Q96LX7 622 aa4.41□□□□□ -1.7
CCDC7-211ENST00000638889 NUP88Q99567 741 aaPredicted RBP4.41□□□□□ -1.7
CCDC7-211ENST00000638889 GTPBP4Q9BZE4 634 aaKnown RBP4.41□□□□□ -1.7
CCDC7-211ENST00000638889 CNNM1Q9NRU3 951 aa4.41□□□□□ -1.7
CCDC7-211ENST00000638889 PI4KBQ9UBF8 816 aa4.41□□□□□ -1.7
CCDC7-211ENST00000638889 AMFRQ9UKV5 643 aa4.41□□□□□ -1.7
CCDC7-211ENST00000638889 IGKV2D-30A0A075B6S6 120 aa4.4□□□□□ -1.71
CCDC7-211ENST00000638889 M0R3H8 397 aa4.4□□□□□ -1.71
CCDC7-211ENST00000638889 GCATO75600 419 aa4.4□□□□□ -1.71
CCDC7-211ENST00000638889 FGAP02671 866 aa4.4□□□□□ -1.71
CCDC7-211ENST00000638889 PRF1P14222 555 aa4.4□□□□□ -1.71
CCDC7-211ENST00000638889 KCNA3P22001 575 aa4.4□□□□□ -1.71
CCDC7-211ENST00000638889 SCP2P22307 547 aa4.4□□□□□ -1.71
CCDC7-211ENST00000638889 FPR3P25089 353 aa4.4□□□□□ -1.71
CCDC7-211ENST00000638889 ADORA2AP29274 412 aa4.4□□□□□ -1.71
CCDC7-211ENST00000638889 SLC11A2P49281 568 aa4.4□□□□□ -1.71
CCDC7-211ENST00000638889 UCP3P55916 312 aa4.4□□□□□ -1.71
CCDC7-211ENST00000638889 KRT17Q04695 432 aa4.4□□□□□ -1.71
CCDC7-211ENST00000638889 ZNF280BQ86YH2 543 aa4.4□□□□□ -1.71
CCDC7-211ENST00000638889 SPATA3Q8NHX4 192 aa4.4□□□□□ -1.71
CCDC7-211ENST00000638889 HSPBAP1Q96EW2 488 aa4.4□□□□□ -1.71
CCDC7-211ENST00000638889 MARK4Q96L34 752 aa4.4□□□□□ -1.71
CCDC7-211ENST00000638889 PRR25Q96S07 402 aa4.4□□□□□ -1.71
CCDC7-211ENST00000638889 EFHD1Q9BUP0 239 aa4.4□□□□□ -1.71
CCDC7-211ENST00000638889 TCF7L1Q9HCS4 588 aa4.4□□□□□ -1.71
CCDC7-211ENST00000638889 MTMR4Q9NYA4 1195 aa4.4□□□□□ -1.71
CCDC7-211ENST00000638889 STXBP5LQ9Y2K9 1186 aa4.4□□□□□ -1.71
CCDC7-211ENST00000638889 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.4□□□□□ -1.71
CCDC7-211ENST00000638889 AP4M1O00189 453 aa4.39□□□□□ -1.71
CCDC7-211ENST00000638889 SRSF1Q07955 248 aaKnown RBP eCLIP4.39□□□□□ -1.71
CCDC7-211ENST00000638889 DEF8Q6ZN54 512 aa4.39□□□□□ -1.71
CCDC7-211ENST00000638889 RAB11FIP4Q86YS3 637 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms