RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	PYM1	Q9BRP8	204 aa	Known RBP	12.63	□□□□□ -0.39
PAX6-238	ENST00000638755	ZDHHC5	Q9C0B5	715 aa		12.63	□□□□□ -0.39
PAX6-238	ENST00000638755	TM7SF3	Q9NS93	570 aa		12.63	□□□□□ -0.39
PAX6-238	ENST00000638755	GCNT4	Q9P109	453 aa		12.63	□□□□□ -0.39
PAX6-238	ENST00000638755	DSE	Q9UL01	958 aa		12.63	□□□□□ -0.39
PAX6-238	ENST00000638755	FNDC3A	Q9Y2H6	1198 aa	Known RBP	12.63	□□□□□ -0.39
PAX6-238	ENST00000638755	RBM19	Q9Y4C8	960 aa	Known RBP	12.63	□□□□□ -0.39
PAX6-238	ENST00000638755	KNTC1	P50748	2209 aa		12.63	□□□□□ -0.39
PAX6-238	ENST00000638755	MUC22	E2RYF6	1773 aa	Predicted RBP	12.63	□□□□□ -0.39
PAX6-238	ENST00000638755	ATM	Q13315	3056 aa		12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	COL6A6	A6NMZ7	2263 aa		12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	TEX51	A0A1B0GUA7	166 aa		12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	SFI1	A8K8P3	1242 aa		12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	BTBD18	B2RXH4	712 aa		12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	LEFTY2	O00292	366 aa		12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	RRP8	O43159	456 aa	Known RBP	12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	ZBTB24	O43167	697 aa	Predicted RBP	12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	TLX3	O43711	291 aa	Predicted RBP	12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	CILP	O75339	1184 aa		12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	ZNF217	O75362	1048 aa		12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	DKK1	O94907	266 aa		12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	HOXB2	P14652	356 aa		12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	MCM7	P33993	719 aa		12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	TNFRSF4	P43489	277 aa		12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	ZXDB	P98169	803 aa		12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	ATP2C1	P98194	919 aa	Predicted RBP	12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	MCL1	Q07820	350 aa		12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	SAFB	Q15424	915 aa	Known RBP eCLIP	12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	ECM1	Q16610	540 aa		12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	TAF1B	Q53T94	588 aa	Predicted RBP	12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	WDR45B	Q5MNZ6	344 aa		12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	SPATA1	Q5VX52	437 aa		12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	C9orf57	Q5W0N0	161 aa		12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	WSCD1	Q658N2	575 aa		12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	PCSK4	Q6UW60	755 aa		12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	ADGRG2	Q8IZP9	1017 aa		12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	DAW1	Q8N136	415 aa		12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	ZNF513	Q8N8E2	541 aa	Predicted RBP	12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	ZNF419	Q96HQ0	510 aa	Predicted RBP	12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	HAPLN2	Q9GZV7	340 aa		12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	MIR1-1HG	Q9H1L0	117 aa		12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	BRMS1	Q9HCU9	246 aa		12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	CD93	Q9NPY3	652 aa		12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	ARHGAP26	Q9UNA1	814 aa		12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	12.62	□□□□□ -0.39
PAX6-238	ENST00000638755	MYOF	Q9NZM1	2061 aa		12.61	□□□□□ -0.39
PAX6-238	ENST00000638755	TBC1D3B	A6NDS4	549 aa		12.61	□□□□□ -0.39
PAX6-238	ENST00000638755	MEI4	A8MW99	385 aa		12.61	□□□□□ -0.39
PAX6-238	ENST00000638755	CDKL5	O76039	1030 aa		12.61	□□□□□ -0.39
PAX6-238	ENST00000638755	NOL4	O94818	638 aa		12.61	□□□□□ -0.39
PAX6-238	ENST00000638755	CER1	O95813	267 aa		12.61	□□□□□ -0.39
PAX6-238	ENST00000638755	TCF3	P15923	654 aa		12.61	□□□□□ -0.39
PAX6-238	ENST00000638755	NDUFV2	P19404	249 aa		12.61	□□□□□ -0.39
PAX6-238	ENST00000638755	CYP2F1	P24903	491 aa		12.61	□□□□□ -0.39
PAX6-238	ENST00000638755	CCT6A	P40227	531 aa	Known RBP	12.61	□□□□□ -0.39
PAX6-238	ENST00000638755	MATK	P42679	507 aa		12.61	□□□□□ -0.39
PAX6-238	ENST00000638755	RPL10A	P62906	217 aa	Known RBP	12.61	□□□□□ -0.39
PAX6-238	ENST00000638755	SMAD1	Q15797	465 aa	Known RBP	12.61	□□□□□ -0.39
PAX6-238	ENST00000638755	JADE1	Q6IE81	842 aa		12.61	□□□□□ -0.39
PAX6-238	ENST00000638755	DHRS13	Q6UX07	377 aa		12.61	□□□□□ -0.39
PAX6-238	ENST00000638755	RUFY3	Q7L099	469 aa		12.61	□□□□□ -0.39
PAX6-238	ENST00000638755	ZCCHC9	Q8N567	271 aa	Known RBP	12.61	□□□□□ -0.39
PAX6-238	ENST00000638755	FAM181A	Q8N9Y4	354 aa		12.61	□□□□□ -0.39
PAX6-238	ENST00000638755	FSIP1	Q8NA03	581 aa		12.61	□□□□□ -0.39
PAX6-238	ENST00000638755	FOXJ1	Q92949	421 aa		12.61	□□□□□ -0.39
PAX6-238	ENST00000638755	NXPE2	Q96DL1	559 aa		12.61	□□□□□ -0.39
PAX6-238	ENST00000638755	TRMT2B	Q96GJ1	504 aa	Known RBP	12.61	□□□□□ -0.39
PAX6-238	ENST00000638755	DNMT3L	Q9UJW3	386 aa		12.61	□□□□□ -0.39
PAX6-238	ENST00000638755	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	12.61	□□□□□ -0.39
PAX6-238	ENST00000638755	KIAA1024	Q9UPX6	916 aa		12.61	□□□□□ -0.39
PAX6-238	ENST00000638755	BTBD3	Q9Y2F9	522 aa		12.61	□□□□□ -0.39
PAX6-238	ENST00000638755	PTPN13	Q12923	2485 aa		12.61	□□□□□ -0.39
PAX6-238	ENST00000638755	KNL1	Q8NG31	2342 aa		12.6	□□□□□ -0.39
PAX6-238	ENST00000638755		A0A0A0MRY4	1105 aa		12.6	□□□□□ -0.39
PAX6-238	ENST00000638755		A0A1B0GTW7	788 aa		12.6	□□□□□ -0.39
PAX6-238	ENST00000638755	PIR	O00625	290 aa		12.6	□□□□□ -0.39
PAX6-238	ENST00000638755	FLRT2	O43155	660 aa		12.6	□□□□□ -0.39
PAX6-238	ENST00000638755	ZNF883	P0CG24	379 aa		12.6	□□□□□ -0.39
PAX6-238	ENST00000638755	ADH5	P11766	374 aa		12.6	□□□□□ -0.39
PAX6-238	ENST00000638755	EIF2D	P41214	584 aa	Known RBP	12.6	□□□□□ -0.39
PAX6-238	ENST00000638755	TSPY1	Q01534	308 aa		12.6	□□□□□ -0.39
PAX6-238	ENST00000638755	ENOX2	Q16206	610 aa	Known RBP	12.6	□□□□□ -0.39
PAX6-238	ENST00000638755	HLA-B	Q31612	363 aa		12.6	□□□□□ -0.39
PAX6-238	ENST00000638755	RHBDF2	Q6PJF5	856 aa		12.6	□□□□□ -0.39
PAX6-238	ENST00000638755	TRMT11	Q7Z4G4	463 aa	Known RBP	12.6	□□□□□ -0.39
PAX6-238	ENST00000638755	NAT16	Q8N8M0	369 aa		12.6	□□□□□ -0.39
PAX6-238	ENST00000638755	BICD1	Q96G01	975 aa		12.6	□□□□□ -0.39
PAX6-238	ENST00000638755	MYRFL	Q96LU7	910 aa		12.6	□□□□□ -0.39
PAX6-238	ENST00000638755	SLC6A17	Q9H1V8	727 aa		12.6	□□□□□ -0.39
PAX6-238	ENST00000638755	RPF1	Q9H9Y2	349 aa	Known RBP	12.6	□□□□□ -0.39
PAX6-238	ENST00000638755	AK5	Q9Y6K8	562 aa		12.6	□□□□□ -0.39
PAX6-238	ENST00000638755	SCN1A	P35498	2009 aa		12.6	□□□□□ -0.39
PAX6-238	ENST00000638755	ANAPC1	Q9H1A4	1944 aa		12.6	□□□□□ -0.39
PAX6-238	ENST00000638755		A0A1W2PQF6	199 aa		12.59	□□□□□ -0.39
PAX6-238	ENST00000638755	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	12.59	□□□□□ -0.39
PAX6-238	ENST00000638755		E9PAM4	449 aa		12.59	□□□□□ -0.39
PAX6-238	ENST00000638755	TNFSF14	O43557	240 aa		12.59	□□□□□ -0.39
PAX6-238	ENST00000638755	ADH1C	P00326	375 aa		12.59	□□□□□ -0.39
PAX6-238	ENST00000638755	NFIC	P08651	508 aa		12.59	□□□□□ -0.39
PAX6-238	ENST00000638755	PAX3	P23760	479 aa		12.59	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms