RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 KCNK16Q96T55 309 aa16.93■□□□□ 0.3
CLN6-216ENST00000636876 APOL5Q9BWW9 433 aa16.93■□□□□ 0.3
CLN6-216ENST00000636876 NUCKS1Q9H1E3 243 aaKnown RBP16.93■□□□□ 0.3
CLN6-216ENST00000636876 S1PR5Q9H228 398 aa16.93■□□□□ 0.3
CLN6-216ENST00000636876 AIPL1Q9NZN9 384 aa16.93■□□□□ 0.3
CLN6-216ENST00000636876 CD207Q9UJ71 328 aa16.93■□□□□ 0.3
CLN6-216ENST00000636876 NOCTQ9UK39 431 aaKnown RBP16.93■□□□□ 0.3
CLN6-216ENST00000636876 COG5Q9UP83 839 aa16.93■□□□□ 0.3
CLN6-216ENST00000636876 H3BQ06 376 aaPredicted RBP16.92■□□□□ 0.3
CLN6-216ENST00000636876 TPM1P09493 284 aa16.92■□□□□ 0.3
CLN6-216ENST00000636876 CCDC172P0C7W6 258 aa16.92■□□□□ 0.3
CLN6-216ENST00000636876 SETSIPP0DME0 302 aa16.92■□□□□ 0.3
CLN6-216ENST00000636876 KCNA5P22460 613 aa16.92■□□□□ 0.3
CLN6-216ENST00000636876 CASP14P31944 242 aa16.92■□□□□ 0.3
CLN6-216ENST00000636876 SSTR3P32745 418 aaPredicted RBP16.92■□□□□ 0.3
CLN6-216ENST00000636876 SLC8A3P57103 927 aa16.92■□□□□ 0.3
CLN6-216ENST00000636876 ITIH3Q06033 890 aa16.92■□□□□ 0.3
CLN6-216ENST00000636876 CLUL1Q15846 466 aa16.92■□□□□ 0.3
CLN6-216ENST00000636876 ASIC2Q16515 512 aa16.92■□□□□ 0.3
CLN6-216ENST00000636876 E4F1Q66K89 784 aaPredicted RBP16.92■□□□□ 0.3
CLN6-216ENST00000636876 DENND1BQ6P3S1 775 aa16.92■□□□□ 0.3
CLN6-216ENST00000636876 IRF2BP2Q7Z5L9 587 aa16.92■□□□□ 0.3
CLN6-216ENST00000636876 GPR149Q86SP6 731 aa16.92■□□□□ 0.3
CLN6-216ENST00000636876 SMRP1Q8NCR6 262 aa16.92■□□□□ 0.3
CLN6-216ENST00000636876 UBA3Q8TBC4 463 aa16.92■□□□□ 0.3
CLN6-216ENST00000636876 GPR152Q8TDT2 470 aa16.92■□□□□ 0.3
CLN6-216ENST00000636876 DDX1Q92499 740 aaKnown RBP16.92■□□□□ 0.3
CLN6-216ENST00000636876 PSMG2Q969U7 264 aa16.92■□□□□ 0.3
CLN6-216ENST00000636876 ADAM7Q9H2U9 754 aa16.92■□□□□ 0.3
CLN6-216ENST00000636876 PCDHGC3Q9UN70 934 aa16.92■□□□□ 0.3
CLN6-216ENST00000636876 MUC3AQ02505 3323 aa16.91■□□□□ 0.3
CLN6-216ENST00000636876 SLC38A8A6NNN8 435 aa16.91■□□□□ 0.3
CLN6-216ENST00000636876 HHLA1C9JL84 531 aa16.91■□□□□ 0.3
CLN6-216ENST00000636876 XPO1O14980 1071 aaKnown RBP16.91■□□□□ 0.3
CLN6-216ENST00000636876 CFHP08603 1231 aa16.91■□□□□ 0.3
CLN6-216ENST00000636876 CSH1P0DML2 217 aa16.91■□□□□ 0.3
CLN6-216ENST00000636876 CSH2P0DML3 217 aa16.91■□□□□ 0.3
CLN6-216ENST00000636876 CDC25BP30305 580 aa16.91■□□□□ 0.3
CLN6-216ENST00000636876 KRT9P35527 623 aa16.91■□□□□ 0.3
CLN6-216ENST00000636876 PDE4CQ08493 712 aa16.91■□□□□ 0.3
CLN6-216ENST00000636876 TAF3Q5VWG9 929 aa16.91■□□□□ 0.3
CLN6-216ENST00000636876 CES5AQ6NT32 575 aa16.91■□□□□ 0.3
CLN6-216ENST00000636876 DNAJB7Q7Z6W7 309 aaPredicted RBP16.91■□□□□ 0.3
CLN6-216ENST00000636876 ITIH5Q86UX2 942 aa16.91■□□□□ 0.3
CLN6-216ENST00000636876 ZNF677Q86XU0 584 aa16.91■□□□□ 0.3
CLN6-216ENST00000636876 STKLD1Q8NE28 680 aa16.91■□□□□ 0.3
CLN6-216ENST00000636876 SLC20A1Q8WUM9 679 aa16.91■□□□□ 0.3
CLN6-216ENST00000636876 SYN2Q92777 582 aaPredicted RBP16.91■□□□□ 0.3
CLN6-216ENST00000636876 ZNF512Q96ME7 567 aaPredicted RBP16.91■□□□□ 0.3
CLN6-216ENST00000636876 UBXN6Q9BZV1 441 aa16.91■□□□□ 0.3
CLN6-216ENST00000636876 PIDD1Q9HB75 910 aa16.91■□□□□ 0.3
CLN6-216ENST00000636876 PNPLA8Q9NP80 782 aa16.91■□□□□ 0.3
CLN6-216ENST00000636876 DOCK6Q96HP0 2047 aa16.91■□□□□ 0.3
CLN6-216ENST00000636876 TULP2O00295 520 aa16.9■□□□□ 0.3
CLN6-216ENST00000636876 TNFRSF10BO14763 440 aa16.9■□□□□ 0.3
CLN6-216ENST00000636876 HMGA1P17096 107 aaKnown RBP16.9■□□□□ 0.3
CLN6-216ENST00000636876 PTPN2P17706 415 aa16.9■□□□□ 0.3
CLN6-216ENST00000636876 PRKCIP41743 596 aa16.9■□□□□ 0.3
CLN6-216ENST00000636876 CDR2Q01850 454 aa16.9■□□□□ 0.3
CLN6-216ENST00000636876 MTMR3Q13615 1198 aa16.9■□□□□ 0.3
CLN6-216ENST00000636876 SECISBP2LQ93073 1101 aaKnown RBP16.9■□□□□ 0.3
CLN6-216ENST00000636876 HCFC1R1Q9NWW0 138 aa16.9■□□□□ 0.3
CLN6-216ENST00000636876 PATJQ8NI35 1801 aa16.9■□□□□ 0.3
CLN6-216ENST00000636876 C2orf16Q68DN1 1984 aa16.89■□□□□ 0.3
CLN6-216ENST00000636876 XIRP2A4UGR9 3374 aa16.89■□□□□ 0.3
CLN6-216ENST00000636876 MFAP3LO75121 409 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 MMEP08473 750 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 CHRNB2P17787 502 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 MTHFRP42898 656 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 GPD2P43304 727 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 PLA2G4AP47712 749 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 SLC5A3P53794 718 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 FMO1Q01740 532 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 KLHL30Q0D2K2 578 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 ARID5BQ14865 1188 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 TAF12Q16514 161 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 LEXMQ3ZCV2 418 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 DENND5BQ6ZUT9 1274 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 GPRIN1Q7Z2K8 1008 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.89■□□□□ 0.29
CLN6-216ENST00000636876 GRASPQ7Z6J2 395 aaPredicted RBP16.89■□□□□ 0.29
CLN6-216ENST00000636876 PIGZQ86VD9 579 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 TMC8Q8IU68 726 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 PASD1Q8IV76 773 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 HS6ST3Q8IZP7 471 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 NUP93Q8N1F7 819 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 OR8K1Q8NGG5 319 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 SLC35F5Q8WV83 523 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 RIPOR3Q96MK2 946 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 DNAJC7Q99615 494 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 CORO1BQ9BR76 489 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 TTLL2Q9BWV7 592 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 LRRC3Q9BY71 257 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 LHX5Q9H2C1 402 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 PDCL3Q9H2J4 239 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 ZNF334Q9HCZ1 680 aaPredicted RBP16.89■□□□□ 0.29
CLN6-216ENST00000636876 ASAH2Q9NR71 780 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 DNMT3BQ9UBC3 853 aaKnown RBP16.89■□□□□ 0.29
CLN6-216ENST00000636876 CDH22Q9UJ99 828 aa16.89■□□□□ 0.29
CLN6-216ENST00000636876 USP15Q9Y4E8 981 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms