RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 CMASQ8NFW8 434 aaPredicted RBP15.22■□□□□ 0.03
CLN6-215ENST00000636674 RFWD2Q8NHY2 731 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 KCNV2Q8TDN2 545 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 TSSK1BQ9BXA7 367 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 MRPL4Q9BYD3 311 aaKnown RBP15.22■□□□□ 0.03
CLN6-215ENST00000636674 XYLT2Q9H1B5 865 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 AS3MTQ9HBK9 375 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 SLC17A7Q9P2U7 560 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 XPO7Q9UIA9 1087 aaKnown RBP15.22■□□□□ 0.03
CLN6-215ENST00000636674 MTO1Q9Y2Z2 717 aaKnown RBP15.22■□□□□ 0.03
CLN6-215ENST00000636674 KLF11O14901 512 aa15.21■□□□□ 0.03
CLN6-215ENST00000636674 OGTO15294 1046 aa15.21■□□□□ 0.03
CLN6-215ENST00000636674 ACADSP16219 412 aa15.21■□□□□ 0.03
CLN6-215ENST00000636674 ZNF280AP59817 542 aaPredicted RBP15.21■□□□□ 0.03
CLN6-215ENST00000636674 DYNLT1P63172 113 aa15.21■□□□□ 0.03
CLN6-215ENST00000636674 KRT72Q14CN4 511 aa15.21■□□□□ 0.03
CLN6-215ENST00000636674 TMEM132BQ14DG7 1078 aa15.21■□□□□ 0.03
CLN6-215ENST00000636674 PRKD1Q15139 912 aaPredicted RBP15.21■□□□□ 0.03
CLN6-215ENST00000636674 SEZ6Q53EL9 994 aa15.21■□□□□ 0.03
CLN6-215ENST00000636674 DENND1BQ6P3S1 775 aa15.21■□□□□ 0.03
CLN6-215ENST00000636674 JOSD2Q8TAC2 188 aa15.21■□□□□ 0.03
CLN6-215ENST00000636674 SLC44A1Q8WWI5 657 aa15.21■□□□□ 0.03
CLN6-215ENST00000636674 PTPRN2Q92932 1015 aa15.21■□□□□ 0.03
CLN6-215ENST00000636674 BTBD10Q9BSF8 475 aa15.21■□□□□ 0.03
CLN6-215ENST00000636674 MMADHCQ9H3L0 296 aaPredicted RBP15.21■□□□□ 0.03
CLN6-215ENST00000636674 CNTN3Q9P232 1028 aa15.21■□□□□ 0.03
CLN6-215ENST00000636674 SAE1Q9UBE0 346 aaPredicted RBP15.21■□□□□ 0.03
CLN6-215ENST00000636674 CPSF3Q9UKF6 684 aaKnown RBP15.21■□□□□ 0.03
CLN6-215ENST00000636674 TCRBV7S3A2A0A539 114 aa15.21■□□□□ 0.02
CLN6-215ENST00000636674 MCF2LO15068 1137 aa15.21■□□□□ 0.02
CLN6-215ENST00000636674 MED7O43513 233 aa15.21■□□□□ 0.02
CLN6-215ENST00000636674 LPXNO60711 386 aa15.21■□□□□ 0.02
CLN6-215ENST00000636674 MAFO75444 373 aaPredicted RBP15.21■□□□□ 0.02
CLN6-215ENST00000636674 HARSP12081 509 aaKnown RBP15.21■□□□□ 0.02
CLN6-215ENST00000636674 CDK16Q00536 496 aa15.21■□□□□ 0.02
CLN6-215ENST00000636674 SMTNL2Q2TAL5 461 aa15.21■□□□□ 0.02
CLN6-215ENST00000636674 ZNF699Q32M78 642 aa15.21■□□□□ 0.02
CLN6-215ENST00000636674 WDR78Q5VTH9 848 aa15.21■□□□□ 0.02
CLN6-215ENST00000636674 CAPRIN2Q6IMN6 1127 aaKnown RBP15.21■□□□□ 0.02
CLN6-215ENST00000636674 UNC45BQ8IWX7 931 aa15.21■□□□□ 0.02
CLN6-215ENST00000636674 KIAA0319LQ8IZA0 1049 aa15.21■□□□□ 0.02
CLN6-215ENST00000636674 SCYL3Q8IZE3 742 aa15.21■□□□□ 0.02
CLN6-215ENST00000636674 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.21■□□□□ 0.02
CLN6-215ENST00000636674 DNERQ8NFT8 737 aa15.21■□□□□ 0.02
CLN6-215ENST00000636674 CADM1Q9BY67 442 aaKnown RBP15.21■□□□□ 0.02
CLN6-215ENST00000636674 ZWILCHQ9H900 591 aa15.21■□□□□ 0.02
CLN6-215ENST00000636674 PNPLA8Q9NP80 782 aa15.21■□□□□ 0.02
CLN6-215ENST00000636674 ECM2O94769 699 aaPredicted RBP15.2■□□□□ 0.02
CLN6-215ENST00000636674 MT-ND3P03897 115 aa15.2■□□□□ 0.02
CLN6-215ENST00000636674 HOXC6P09630 235 aa15.2■□□□□ 0.02
CLN6-215ENST00000636674 PTDSS1P48651 473 aaKnown RBP15.2■□□□□ 0.02
CLN6-215ENST00000636674 PTK7Q13308 1070 aa15.2■□□□□ 0.02
CLN6-215ENST00000636674 TRPC3Q13507 836 aa15.2■□□□□ 0.02
CLN6-215ENST00000636674 STXBP2Q15833 593 aa15.2■□□□□ 0.02
CLN6-215ENST00000636674 BBS9Q3SYG4 887 aa15.2■□□□□ 0.02
CLN6-215ENST00000636674 ZNF394Q53GI3 561 aa15.2■□□□□ 0.02
CLN6-215ENST00000636674 ZNF280CQ8ND82 737 aa15.2■□□□□ 0.02
CLN6-215ENST00000636674 ACO2Q99798 780 aaKnown RBP15.2■□□□□ 0.02
CLN6-215ENST00000636674 ADAM33Q9BZ11 813 aa15.2■□□□□ 0.02
CLN6-215ENST00000636674 KCNK13Q9HB14 408 aa15.2■□□□□ 0.02
CLN6-215ENST00000636674 CYTH4Q9UIA0 394 aa15.2■□□□□ 0.02
CLN6-215ENST00000636674 TEX264Q9Y6I9 313 aa15.2■□□□□ 0.02
CLN6-215ENST00000636674 MGAMO43451 1857 aa15.2■□□□□ 0.02
CLN6-215ENST00000636674 TCRBV9S1A1TA0A576 114 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 TTLL13PA6NNM8 815 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 ENDOD1O94919 500 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 DLDP09622 509 aaKnown RBP15.19■□□□□ 0.02
CLN6-215ENST00000636674 STIP1P31948 543 aaKnown RBP15.19■□□□□ 0.02
CLN6-215ENST00000636674 PSMC4P43686 418 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 ARFIP2P53365 341 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 EIF3EP60228 445 aaKnown RBP15.19■□□□□ 0.02
CLN6-215ENST00000636674 DPYSL3Q14195 570 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 KCNJ11Q14654 390 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 NOMO1Q15155 1222 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 TSNAXIP1Q2TAA8 658 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 XYLT1Q86Y38 959 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 APLFQ8IW19 511 aaPredicted RBP15.19■□□□□ 0.02
CLN6-215ENST00000636674 TTC8Q8TAM2 541 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 SPDL1Q96EA4 605 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 NSL1Q96IY1 281 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 PCYT2Q99447 389 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 FRMD8Q9BZ67 464 aaPredicted RBP15.19■□□□□ 0.02
CLN6-215ENST00000636674 RSAD1Q9HA92 442 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 NRBP2Q9NSY0 501 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 ZFATQ9P243 1243 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 STOML1Q9UBI4 398 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 HEY2Q9UBP5 337 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 ZNF112Q9UJU3 913 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 DCTN4Q9UJW0 460 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 SCAF8Q9UPN6 1271 aaKnown RBP15.19■□□□□ 0.02
CLN6-215ENST00000636674 A0A0G2JMZ2 1700 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 LRRC37A2A6NM11 1700 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 WDR90Q96KV7 1748 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 WDR91A4D1P6 747 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 CHADO15335 359 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 B4GALT4O60513 344 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 ENTPD5O75356 428 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 CD48P09326 243 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 RBP3P10745 1247 aa15.19■□□□□ 0.02
CLN6-215ENST00000636674 PSMC1P62191 440 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms