RNA–Protein interactions for RNA: ENST00000636661.1

CLCN2-215, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 4,378 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-215ENST00000636661 UNKQ9C0B0 810 aaKnown RBP16.99■□□□□ 0.31
CLCN2-215ENST00000636661 SP110Q9HB58 689 aa16.99■□□□□ 0.31
CLCN2-215ENST00000636661 HNRNPCL1O60812 293 aaKnown RBP16.99■□□□□ 0.31
CLCN2-215ENST00000636661 PTGER2P43116 358 aa16.99■□□□□ 0.31
CLCN2-215ENST00000636661 SATB1Q01826 763 aa16.99■□□□□ 0.31
CLCN2-215ENST00000636661 SLC25A41Q8N5S1 370 aa16.99■□□□□ 0.31
CLCN2-215ENST00000636661 LRRN4Q8WUT4 740 aa16.99■□□□□ 0.31
CLCN2-215ENST00000636661 KIF9Q9HAQ2 790 aa16.99■□□□□ 0.31
CLCN2-215ENST00000636661 BATF3Q9NR55 127 aa16.99■□□□□ 0.31
CLCN2-215ENST00000636661 UBP1Q9NZI7 540 aa16.99■□□□□ 0.31
CLCN2-215ENST00000636661 FANCGO15287 622 aa16.99■□□□□ 0.31
CLCN2-215ENST00000636661 PMPCBO75439 489 aa16.99■□□□□ 0.31
CLCN2-215ENST00000636661 ACO1P21399 889 aaKnown RBP16.99■□□□□ 0.31
CLCN2-215ENST00000636661 SPRP35270 261 aaPredicted RBP16.99■□□□□ 0.31
CLCN2-215ENST00000636661 RPL10AP62906 217 aaKnown RBP16.99■□□□□ 0.31
CLCN2-215ENST00000636661 PAN2Q504Q3 1202 aaKnown RBP16.99■□□□□ 0.31
CLCN2-215ENST00000636661 ERMARDQ5T6L9 678 aa16.99■□□□□ 0.31
CLCN2-215ENST00000636661 FAM71AQ8IYT1 594 aa16.99■□□□□ 0.31
CLCN2-215ENST00000636661 SLCO1B3Q9NPD5 702 aa16.99■□□□□ 0.31
CLCN2-215ENST00000636661 THEGQ9P2T0 379 aa16.99■□□□□ 0.31
CLCN2-215ENST00000636661 ATP8B3O60423 1300 aa16.99■□□□□ 0.31
CLCN2-215ENST00000636661 NKRFO15226 690 aaKnown RBP eCLIP16.98■□□□□ 0.31
CLCN2-215ENST00000636661 GH1P01241 217 aa16.98■□□□□ 0.31
CLCN2-215ENST00000636661 C6orf222P0C671 652 aaPredicted RBP16.98■□□□□ 0.31
CLCN2-215ENST00000636661 MTHFD1LQ6UB35 978 aa16.98■□□□□ 0.31
CLCN2-215ENST00000636661 SHC3Q92529 594 aa16.98■□□□□ 0.31
CLCN2-215ENST00000636661 DDIT4Q9NX09 232 aa16.98■□□□□ 0.31
CLCN2-215ENST00000636661 KCNJ2P63252 427 aa16.98■□□□□ 0.31
CLCN2-215ENST00000636661 BTKQ06187 659 aa16.98■□□□□ 0.31
CLCN2-215ENST00000636661 CNGA2Q16280 664 aa16.98■□□□□ 0.31
CLCN2-215ENST00000636661 UGCGQ16739 394 aa16.98■□□□□ 0.31
CLCN2-215ENST00000636661 LRRC23Q53EV4 343 aaPredicted RBP16.98■□□□□ 0.31
CLCN2-215ENST00000636661 TMEM161BQ8NDZ6 487 aa16.98■□□□□ 0.31
CLCN2-215ENST00000636661 CNPY3Q9BT09 278 aa16.98■□□□□ 0.31
CLCN2-215ENST00000636661 TMEM120AQ9BXJ8 343 aa16.98■□□□□ 0.31
CLCN2-215ENST00000636661 PCDH9Q9HC56 1237 aa16.98■□□□□ 0.31
CLCN2-215ENST00000636661 A1CFQ9NQ94 594 aaKnown RBP16.98■□□□□ 0.31
CLCN2-215ENST00000636661 KBTBD13C9JR72 458 aa16.98■□□□□ 0.31
CLCN2-215ENST00000636661 SNX3O60493 162 aa16.98■□□□□ 0.31
CLCN2-215ENST00000636661 GNAT1P11488 350 aa16.98■□□□□ 0.31
CLCN2-215ENST00000636661 GFAPP14136 432 aa16.98■□□□□ 0.31
CLCN2-215ENST00000636661 SLC35G1Q2M3R5 365 aa16.98■□□□□ 0.31
CLCN2-215ENST00000636661 FASTKD5Q7L8L6 764 aaKnown RBP16.98■□□□□ 0.31
CLCN2-215ENST00000636661 RMDN1Q96DB5 314 aa16.98■□□□□ 0.31
CLCN2-215ENST00000636661 PCDHB18PQ96TA0 734 aa16.98■□□□□ 0.31
CLCN2-215ENST00000636661 WARS2Q9UGM6 360 aaKnown RBP16.98■□□□□ 0.31
CLCN2-215ENST00000636661 PDK1Q15118 436 aa16.98■□□□□ 0.31
CLCN2-215ENST00000636661 CD302Q8IX05 232 aa16.98■□□□□ 0.31
CLCN2-215ENST00000636661 PPP1R13LQ8WUF5 828 aa16.98■□□□□ 0.31
CLCN2-215ENST00000636661 FAM136AQ96C01 138 aa16.98■□□□□ 0.31
CLCN2-215ENST00000636661 IL1RL2Q9HB29 575 aa16.98■□□□□ 0.31
CLCN2-215ENST00000636661 XAB2Q9HCS7 855 aaKnown RBP16.98■□□□□ 0.31
CLCN2-215ENST00000636661 TYW5A2RUC4 315 aaKnown RBP16.97■□□□□ 0.31
CLCN2-215ENST00000636661 RASA2Q15283 850 aa16.97■□□□□ 0.31
CLCN2-215ENST00000636661 RARS2Q5T160 578 aaKnown RBP16.97■□□□□ 0.31
CLCN2-215ENST00000636661 ZCCHC23Q6ZST2 131 aa16.97■□□□□ 0.31
CLCN2-215ENST00000636661 EXOC3L1Q86VI1 746 aa16.97■□□□□ 0.31
CLCN2-215ENST00000636661 SCUBE3Q8IX30 993 aa16.97■□□□□ 0.31
CLCN2-215ENST00000636661 MSL3Q8N5Y2 521 aaKnown RBP16.97■□□□□ 0.31
CLCN2-215ENST00000636661 SEMA4DQ92854 862 aa16.97■□□□□ 0.31
CLCN2-215ENST00000636661 KIAA1683Q9H0B3 1180 aa16.97■□□□□ 0.31
CLCN2-215ENST00000636661 FAM8A1Q9UBU6 413 aa16.97■□□□□ 0.31
CLCN2-215ENST00000636661 FSBPO95073 299 aa16.97■□□□□ 0.31
CLCN2-215ENST00000636661 R3HDM1Q15032 1099 aaKnown RBP16.97■□□□□ 0.31
CLCN2-215ENST00000636661 CES3Q6UWW8 571 aa16.97■□□□□ 0.31
CLCN2-215ENST00000636661 SLC26A11Q86WA9 606 aa16.97■□□□□ 0.31
CLCN2-215ENST00000636661 TFB1MQ8WVM0 346 aaKnown RBP16.97■□□□□ 0.31
CLCN2-215ENST00000636661 NCLNQ969V3 563 aa16.97■□□□□ 0.31
CLCN2-215ENST00000636661 TMEM176AQ96HP8 235 aa16.97■□□□□ 0.31
CLCN2-215ENST00000636661 YY1AP1Q9H869 796 aa16.97■□□□□ 0.31
CLCN2-215ENST00000636661 VAV3Q9UKW4 847 aa16.97■□□□□ 0.31
CLCN2-215ENST00000636661 TGM2P21980 687 aa16.97■□□□□ 0.31
CLCN2-215ENST00000636661 TNFRSF8P28908 595 aa16.97■□□□□ 0.31
CLCN2-215ENST00000636661 ZCWPW2Q504Y3 356 aa16.97■□□□□ 0.31
CLCN2-215ENST00000636661 ZBTB41Q5SVQ8 909 aa16.97■□□□□ 0.31
CLCN2-215ENST00000636661 OR5B17Q8NGF7 314 aa16.97■□□□□ 0.31
CLCN2-215ENST00000636661 RGPD8O14715 1765 aaPredicted RBP16.96■□□□□ 0.31
CLCN2-215ENST00000636661 SNX2O60749 519 aa16.96■□□□□ 0.31
CLCN2-215ENST00000636661 VDRP11473 427 aa16.96■□□□□ 0.31
CLCN2-215ENST00000636661 SERPINB3P29508 390 aa16.96■□□□□ 0.31
CLCN2-215ENST00000636661 AVPR1AP37288 418 aa16.96■□□□□ 0.31
CLCN2-215ENST00000636661 GRIK1P39086 918 aa16.96■□□□□ 0.31
CLCN2-215ENST00000636661 PDCD2Q16342 344 aaPredicted RBP16.96■□□□□ 0.31
CLCN2-215ENST00000636661 WDR49Q8IV35 697 aa16.96■□□□□ 0.31
CLCN2-215ENST00000636661 TEX9Q8N6V9 391 aa16.96■□□□□ 0.31
CLCN2-215ENST00000636661 ELMO2Q96JJ3 720 aa16.96■□□□□ 0.31
CLCN2-215ENST00000636661 FHDC1Q9C0D6 1143 aaPredicted RBP16.96■□□□□ 0.31
CLCN2-215ENST00000636661 SHOC2Q9UQ13 582 aa16.96■□□□□ 0.31
CLCN2-215ENST00000636661 DNAJC16Q9Y2G8 782 aa16.96■□□□□ 0.31
CLCN2-215ENST00000636661 O00370 1275 aa16.96■□□□□ 0.31
CLCN2-215ENST00000636661 MAPTP10636 758 aaKnown RBP16.96■□□□□ 0.31
CLCN2-215ENST00000636661 ATP6V1B1P15313 513 aa16.96■□□□□ 0.31
CLCN2-215ENST00000636661 CYP2B6P20813 491 aa16.96■□□□□ 0.31
CLCN2-215ENST00000636661 MIPP30301 263 aa16.96■□□□□ 0.31
CLCN2-215ENST00000636661 RPA3P35244 121 aaPredicted RBP16.96■□□□□ 0.31
CLCN2-215ENST00000636661 POU5F2Q8N7G0 328 aa16.96■□□□□ 0.31
CLCN2-215ENST00000636661 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.96■□□□□ 0.31
CLCN2-215ENST00000636661 TPST1O60507 370 aa16.96■□□□□ 0.31
CLCN2-215ENST00000636661 ATXN8OSP0DMR3 200 aa16.96■□□□□ 0.31
CLCN2-215ENST00000636661 VHLP40337 213 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms