RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-223ENST00000636306 TCEAL1Q15170 157 aa11.25□□□□□ -0.61
CHD2-223ENST00000636306 EXOC3L4Q17RC7 722 aa11.25□□□□□ -0.61
CHD2-223ENST00000636306 MYLK3Q32MK0 819 aa11.25□□□□□ -0.61
CHD2-223ENST00000636306 TBC1D10BQ4KMP7 808 aaPredicted RBP11.25□□□□□ -0.61
CHD2-223ENST00000636306 ARPINQ7Z6K5 226 aa11.25□□□□□ -0.61
CHD2-223ENST00000636306 NLRX1Q86UT6 975 aa11.25□□□□□ -0.61
CHD2-223ENST00000636306 TRABD2AQ86V40 505 aa11.25□□□□□ -0.61
CHD2-223ENST00000636306 CCDC25Q86WR0 208 aa11.25□□□□□ -0.61
CHD2-223ENST00000636306 UBL4BQ8N7F7 174 aa11.25□□□□□ -0.61
CHD2-223ENST00000636306 ZNF280CQ8ND82 737 aa11.25□□□□□ -0.61
CHD2-223ENST00000636306 SYTL5Q8TDW5 730 aaPredicted RBP11.25□□□□□ -0.61
CHD2-223ENST00000636306 ZNF75CPQ92670 426 aaPredicted RBP11.25□□□□□ -0.61
CHD2-223ENST00000636306 C18orf8Q96DM3 657 aa11.25□□□□□ -0.61
CHD2-223ENST00000636306 SGF29Q96ES7 293 aa11.25□□□□□ -0.61
CHD2-223ENST00000636306 CDHR1Q96JP9 859 aa11.25□□□□□ -0.61
CHD2-223ENST00000636306 FOXP3Q9BZS1 431 aa11.25□□□□□ -0.61
CHD2-223ENST00000636306 UNKQ9C0B0 810 aaKnown RBP11.25□□□□□ -0.61
CHD2-223ENST00000636306 TBC1D23Q9NUY8 699 aa11.25□□□□□ -0.61
CHD2-223ENST00000636306 KANSL3Q9P2N6 904 aa11.25□□□□□ -0.61
CHD2-223ENST00000636306 HEY2Q9UBP5 337 aa11.25□□□□□ -0.61
CHD2-223ENST00000636306 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.25□□□□□ -0.61
CHD2-223ENST00000636306 ASTN1O14525 1302 aa11.25□□□□□ -0.61
CHD2-223ENST00000636306 SMCHD1A6NHR9 2005 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 A0A088AWK7 358 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 FUOMA2VDF0 154 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 WDR64B1ANS9 1081 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 NFIBO00712 420 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 CASQ2O14958 399 aaPredicted RBP11.24□□□□□ -0.61
CHD2-223ENST00000636306 THAP12O43422 761 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 STAM2O75886 525 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 ATP5BP06576 529 aaKnown RBP11.24□□□□□ -0.61
CHD2-223ENST00000636306 CD48P09326 243 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 ARP10275 920 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 COL6A2P12110 1019 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 LMNB1P20700 586 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 SLC5A2P31639 672 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 SNRPFP62306 86 aaKnown RBP11.24□□□□□ -0.61
CHD2-223ENST00000636306 KCNH2Q12809 1159 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 SUPT20HL1Q3ZLR7 823 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 SFT2D3Q587I9 215 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 NOL9Q5SY16 702 aaKnown RBP11.24□□□□□ -0.61
CHD2-223ENST00000636306 RWDD4Q6NW29 188 aaKnown RBP11.24□□□□□ -0.61
CHD2-223ENST00000636306 RNF207Q6ZRF8 634 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 ZNF410Q86VK4 478 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 CCDC105Q8IYK2 499 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 CPXCR1Q8N123 301 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 PRPF31Q8WWY3 499 aaKnown RBP11.24□□□□□ -0.61
CHD2-223ENST00000636306 STARD8Q92502 1023 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 EME1Q96AY2 570 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 PPP1R10Q96QC0 940 aaKnown RBP11.24□□□□□ -0.61
CHD2-223ENST00000636306 WRNIP1Q96S55 665 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 FGFBP2Q9BYJ0 223 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 TRIM55Q9BYV6 548 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 FHDC1Q9C0D6 1143 aaPredicted RBP11.24□□□□□ -0.61
CHD2-223ENST00000636306 SENP6Q9GZR1 1112 aaPredicted RBP11.24□□□□□ -0.61
CHD2-223ENST00000636306 TMEM206Q9H813 350 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 RAVER2Q9HCJ3 691 aaKnown RBP11.24□□□□□ -0.61
CHD2-223ENST00000636306 AGO4Q9HCK5 861 aaKnown RBP11.24□□□□□ -0.61
CHD2-223ENST00000636306 TRPC7Q9HCX4 862 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 SLCO1B3Q9NPD5 702 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 KCNH7Q9NS40 1196 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 NINJ2Q9NZG7 142 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.24□□□□□ -0.61
CHD2-223ENST00000636306 FRMD4BQ9Y2L6 1034 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 SPO11Q9Y5K1 396 aa11.24□□□□□ -0.61
CHD2-223ENST00000636306 COL11A1P12107 1806 aaPredicted RBP11.24□□□□□ -0.61
CHD2-223ENST00000636306 MGEA5O60502 916 aa11.23□□□□□ -0.61
CHD2-223ENST00000636306 SORBS3O60504 671 aa11.23□□□□□ -0.61
CHD2-223ENST00000636306 TNFAIP8O95379 198 aa11.23□□□□□ -0.61
CHD2-223ENST00000636306 OXSR1O95747 527 aaPredicted RBP11.23□□□□□ -0.61
CHD2-223ENST00000636306 IL1BP01584 269 aa11.23□□□□□ -0.61
CHD2-223ENST00000636306 RFX1P22670 979 aa11.23□□□□□ -0.61
CHD2-223ENST00000636306 MAN1A1P33908 653 aa11.23□□□□□ -0.61
CHD2-223ENST00000636306 PHBP35232 272 aa11.23□□□□□ -0.61
CHD2-223ENST00000636306 QARSP47897 775 aaKnown RBP11.23□□□□□ -0.61
CHD2-223ENST00000636306 CDK9P50750 372 aaKnown RBP11.23□□□□□ -0.61
CHD2-223ENST00000636306 GALCP54803 685 aa11.23□□□□□ -0.61
CHD2-223ENST00000636306 TUBA4AP68366 448 aa11.23□□□□□ -0.61
CHD2-223ENST00000636306 PDAP1Q13442 181 aaKnown RBP11.23□□□□□ -0.61
CHD2-223ENST00000636306 APOFQ13790 326 aa11.23□□□□□ -0.61
CHD2-223ENST00000636306 RASA2Q15283 850 aa11.23□□□□□ -0.61
CHD2-223ENST00000636306 TBCCQ15814 346 aa11.23□□□□□ -0.61
CHD2-223ENST00000636306 ODR4Q5SWX8 454 aa11.23□□□□□ -0.61
CHD2-223ENST00000636306 SEL1L2Q5TEA6 688 aa11.23□□□□□ -0.61
CHD2-223ENST00000636306 ARHGEF16Q5VV41 709 aa11.23□□□□□ -0.61
CHD2-223ENST00000636306 C11orf63Q6NUN7 778 aa11.23□□□□□ -0.61
CHD2-223ENST00000636306 NIPAL1Q6NVV3 410 aa11.23□□□□□ -0.61
CHD2-223ENST00000636306 TTC27Q6P3X3 843 aa11.23□□□□□ -0.61
CHD2-223ENST00000636306 RAPH1Q70E73 1250 aa11.23□□□□□ -0.61
CHD2-223ENST00000636306 CENPUQ71F23 418 aa11.23□□□□□ -0.61
CHD2-223ENST00000636306 ANO5Q75V66 913 aa11.23□□□□□ -0.61
CHD2-223ENST00000636306 BBOF1Q8ND07 529 aa11.23□□□□□ -0.61
CHD2-223ENST00000636306 JADE3Q92613 823 aa11.23□□□□□ -0.61
CHD2-223ENST00000636306 VTI1AQ96AJ9 217 aa11.23□□□□□ -0.61
CHD2-223ENST00000636306 GPRASP2Q96D09 838 aa11.23□□□□□ -0.61
CHD2-223ENST00000636306 WDR90Q96KV7 1748 aa11.23□□□□□ -0.61
CHD2-223ENST00000636306 PANX3Q96QZ0 392 aa11.23□□□□□ -0.61
CHD2-223ENST00000636306 TTC1Q99614 292 aa11.23□□□□□ -0.61
CHD2-223ENST00000636306 MAK16Q9BXY0 300 aaKnown RBP11.23□□□□□ -0.61
CHD2-223ENST00000636306 GBA3Q9H227 469 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms