RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022	R3HCC1	Q9Y3T6	440 aa	Known RBP	7.82	□□□□□ -1.16
CACNA1A-222	ENST00000636022	EML5	Q05BV3	1969 aa		7.82	□□□□□ -1.16
CACNA1A-222	ENST00000636022	FRY	Q5TBA9	3013 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	MYO16	Q9Y6X6	1858 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	GON4L	Q3T8J9	2241 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	C2orf78	A6NCI8	922 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	CHURC1-FNTB	B4DL54	471 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	HSP90AA1	P07900	732 aa	Known RBP	7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	USP17L7	P0C7H9	530 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	PYGB	P11216	843 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	ARSA	P15289	507 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	TCF3	P15923	654 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	PTPN1	P18031	435 aa	Known RBP	7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	CMA1	P23946	247 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	ATIC	P31939	592 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	GJA4	P35212	333 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	FNTB	P49356	437 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	CASP4	P49662	377 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	CACNA2D1	P54289	1103 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	MYL6	P60660	151 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	NOP14	P78316	857 aa	Known RBP	7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	ZXDB	P98169	803 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	CYP27A1	Q02318	531 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	FAM160A1	Q05DH4	1040 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	USP4	Q13107	963 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	PSMD2	Q13200	908 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	MTF1	Q14872	753 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	PDGFRL	Q15198	375 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	WDR72	Q3MJ13	1102 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	MDH1B	Q5I0G3	518 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	TDRD10	Q5VZ19	366 aa	Known RBP	7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	NAIF1	Q69YI7	327 aa	Predicted RBP	7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	DENND5B	Q6ZUT9	1274 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	LONP2	Q86WA8	852 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	SLC9A9	Q8IVB4	645 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	CEP57L1	Q8IYX8	460 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	GPR161	Q8N6U8	529 aa	Known RBP	7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	ARL14EP	Q8N8R7	260 aa	Predicted RBP	7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	SPRYD3	Q8NCJ5	442 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	GOLGA5	Q8TBA6	731 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	PARD3B	Q8TEW8	1205 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	OSCP1	Q8WVF1	389 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	CHAMP1	Q96JM3	812 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	C8orf48	Q96LL4	319 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	TTLL2	Q9BWV7	592 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	SNX25	Q9H3E2	840 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	KCTD10	Q9H3F6	313 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	DPEP3	Q9H4B8	488 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	ECT2	Q9H8V3	914 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	VRTN	Q9H8Y1	702 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	TRPC7	Q9HCX4	862 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	PARD6A	Q9NPB6	346 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	NCDN	Q9UBB6	729 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	ARHGAP26	Q9UNA1	814 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	HPSE	Q9Y251	543 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	MYO18A	Q92614	2054 aa	Known RBP	7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	KMT2B	Q9UMN6	2715 aa	Predicted RBP	7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	ASPM	Q8IZT6	3477 aa		7.81	□□□□□ -1.16
CACNA1A-222	ENST00000636022	CHD6	Q8TD26	2715 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	KIAA1549L	Q6ZVL6	1849 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	TRAV19	A0A0A6YYK7	116 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	FAM237A	A0A1B0GTK4	181 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022		A0A1B0GVL5	298 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	ZNF840P	A6NDX5	716 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	LRRIQ3	A6PVS8	624 aa	Predicted RBP	7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022		F8VP50	259 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	TRIM66	O15016	1216 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	ZZEF1	O43149	2961 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	EXOC3	O60645	756 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	VNN1	O95497	513 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	OLFM2	O95897	454 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	EGF	P01133	1207 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	C4BPA	P04003	597 aa	Known RBP	7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	CKM	P06732	381 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	PFKFB1	P16118	471 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	PFKL	P17858	780 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	HDC	P19113	662 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	CNR2	P34972	360 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	GRIK1	P39086	918 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	GALK1	P51570	392 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	TNNC1	P63316	161 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	GRSF1	Q12849	480 aa	Known RBP eCLIP	7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	SRSF5	Q13243	272 aa	Known RBP	7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	TRPC3	Q13507	836 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	PUM1	Q14671	1186 aa	Known RBP eCLIP	7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	LPAL2	Q16609	132 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	RSPO4	Q2I0M5	234 aa	Predicted RBP	7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	EML3	Q32P44	896 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	KMT5B	Q4FZB7	885 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	LAIR1	Q6GTX8	287 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	CC2D1A	Q6P1N0	951 aa	Predicted RBP	7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	WDR5B	Q86VZ2	330 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	FSIP1	Q8NA03	581 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	B3GALNT2	Q8NCR0	500 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	OR6B3	Q8NGW1	331 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	SH3RF2	Q8TEC5	729 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	EZH1	Q92800	747 aa	Predicted RBP	7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	ATP2A3	Q93084	1043 aa		7.8	□□□□□ -1.16
CACNA1A-222	ENST00000636022	SYAP1	Q96A49	352 aa	Predicted RBP	7.8	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms