RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 DPH6Q7L8W6 267 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 MTDHQ86UE4 582 aaKnown RBP11.2□□□□□ -0.62
PSPC1-207ENST00000635251 ZC3H18Q86VM9 953 aaKnown RBP11.2□□□□□ -0.62
PSPC1-207ENST00000635251 XYLT1Q86Y38 959 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 SPATA18Q8TC71 538 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 FNIP1Q8TF40 1166 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 DCAKDQ8WVC6 231 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 NLRP4Q96MN2 994 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 CAMKK2Q96RR4 588 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 CYTH2Q99418 400 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 TBC1D10AQ9BXI6 508 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 INO80BQ9C086 356 aaPredicted RBP11.2□□□□□ -0.62
PSPC1-207ENST00000635251 MAF1Q9H063 256 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 C2orf40Q9H1Z8 148 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 MANSC1Q9H8J5 431 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 RLFQ13129 1914 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 A0A0G2JND7 137 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 E7ESA3 106 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 APOC4-APOC2K7ER74 178 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 C2CD2LO14523 706 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 APOC2P02655 101 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 T-ENOLP0DO92 83 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 RXRBP28702 533 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 EPHB2P29323 1055 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 MIPP30301 263 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 ELK3P41970 407 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 YWHAGP61981 247 aaKnown RBP eCLIP11.2□□□□□ -0.62
PSPC1-207ENST00000635251 ROR1Q01973 937 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 PTK7Q13308 1070 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 ANKRD20A2Q5SQ80 823 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 ANKRD20A1Q5TYW2 823 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 ANKRD20A3Q5VUR7 823 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 NCAPG2Q86XI2 1143 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 CEP120Q8N960 986 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 BANPQ8N9N5 519 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 FAM13CQ8NE31 585 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 SLC7A6OSQ96CW6 309 aaPredicted RBP11.2□□□□□ -0.62
PSPC1-207ENST00000635251 ZNF570Q96NI8 536 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 ADPGKQ9BRR6 497 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 WDR83Q9BRX9 315 aaKnown RBP11.2□□□□□ -0.62
PSPC1-207ENST00000635251 TRIM55Q9BYV6 548 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 RPF1Q9H9Y2 349 aaKnown RBP11.2□□□□□ -0.62
PSPC1-207ENST00000635251 CYLDQ9NQC7 956 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 ASNSD1Q9NWL6 643 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 USP18Q9UMW8 372 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 M0QYV0 167 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 NOP56O00567 594 aaKnown RBP11.19□□□□□ -0.62
PSPC1-207ENST00000635251 ABLIM1O14639 778 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 ECM2O94769 699 aaPredicted RBP11.19□□□□□ -0.62
PSPC1-207ENST00000635251 TRUB2O95900 331 aaKnown RBP11.19□□□□□ -0.62
PSPC1-207ENST00000635251 INHBAP08476 426 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 CXCL8P10145 99 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 PTPN4P29074 926 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 RAD23BP54727 409 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 NRLP54845 237 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 ZC3H12AQ5D1E8 599 aaKnown RBP11.19□□□□□ -0.62
PSPC1-207ENST00000635251 FAM102AQ5T9C2 384 aaPredicted RBP11.19□□□□□ -0.62
PSPC1-207ENST00000635251 WDR78Q5VTH9 848 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 NPNTQ6UXI9 565 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 TRIM50Q86XT4 487 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 RFWD2Q8NHY2 731 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.19□□□□□ -0.62
PSPC1-207ENST00000635251 TTC17Q96AE7 1141 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 DHRS4Q9BTZ2 278 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 TSSK1BQ9BXA7 367 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 RSAD1Q9HA92 442 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 SUFUQ9UMX1 484 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 KBTBD13C9JR72 458 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 H7C0C1 242 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 B4GALT5O43286 388 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 B4GALT4O60513 344 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 MICAL2O94851 1124 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 TSHRP16473 764 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 ATP5OP48047 213 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 CDH6P55285 790 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 ZNF200P98182 395 aaPredicted RBP11.19□□□□□ -0.62
PSPC1-207ENST00000635251 PTPN11Q06124 597 aaPredicted RBP11.19□□□□□ -0.62
PSPC1-207ENST00000635251 MMRN1Q13201 1228 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 TAF11Q15544 211 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 EEF1DP3Q658K8 133 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 METTL7BQ6UX53 244 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 TSHZ1Q6ZSZ6 1077 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 MAB21L3Q8N8X9 362 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 ZNF398Q8TD17 642 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 MZB1Q8WU39 189 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 FAF2Q96CS3 445 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 KLRG1Q96E93 195 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 VPS11Q9H270 941 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 RNPEPL1Q9HAU8 725 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 BATF3Q9NR55 127 aa11.19□□□□□ -0.62
PSPC1-207ENST00000635251 NKX1-2Q9UD57 310 aaPredicted RBP11.19□□□□□ -0.62
PSPC1-207ENST00000635251 SOWAHBA6NEL2 793 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 ACKR2O00590 384 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 GAS2O43903 313 aaKnown RBP11.18□□□□□ -0.62
PSPC1-207ENST00000635251 HAUS5O94927 633 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 GJB1P08034 283 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 CALB2P22676 271 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 ARFIP2P53365 341 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 ZBTB16Q05516 673 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 TAZQ16635 292 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms