RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 MDFIQ99750 246 aa5.23□□□□□ -1.57
LINC00550-201ENST00000629293 TTPALQ9BTX7 342 aa5.23□□□□□ -1.57
LINC00550-201ENST00000629293 KIFC3Q9BVG8 833 aa5.23□□□□□ -1.57
LINC00550-201ENST00000629293 HERC2P3Q9BVR0 1158 aa5.23□□□□□ -1.57
LINC00550-201ENST00000629293 GOLGA2P5Q9HBQ8 144 aa5.23□□□□□ -1.57
LINC00550-201ENST00000629293 UBN1Q9NPG3 1134 aa5.23□□□□□ -1.57
LINC00550-201ENST00000629293 SH3GLB2Q9NR46 395 aa5.23□□□□□ -1.57
LINC00550-201ENST00000629293 HEBP1Q9NRV9 189 aa5.23□□□□□ -1.57
LINC00550-201ENST00000629293 FRYQ5TBA9 3013 aa5.23□□□□□ -1.57
LINC00550-201ENST00000629293 TM4SF5O14894 197 aa5.23□□□□□ -1.57
LINC00550-201ENST00000629293 ASAP2O43150 1006 aa5.23□□□□□ -1.57
LINC00550-201ENST00000629293 BNIP3LO60238 219 aa5.23□□□□□ -1.57
LINC00550-201ENST00000629293 RECQL4O94761 1208 aa5.23□□□□□ -1.57
LINC00550-201ENST00000629293 MAPTP10636 758 aaKnown RBP5.23□□□□□ -1.57
LINC00550-201ENST00000629293 GLRA2P23416 452 aa5.23□□□□□ -1.57
LINC00550-201ENST00000629293 KRT2P35908 639 aa5.23□□□□□ -1.57
LINC00550-201ENST00000629293 PPP2R5CQ13362 524 aa5.23□□□□□ -1.57
LINC00550-201ENST00000629293 HTR4Q13639 388 aa5.23□□□□□ -1.57
LINC00550-201ENST00000629293 PABPC1LQ4VXU2 614 aaKnown RBP5.23□□□□□ -1.57
LINC00550-201ENST00000629293 SLC44A4Q53GD3 710 aa5.23□□□□□ -1.57
LINC00550-201ENST00000629293 ISM2Q6H9L7 571 aa5.23□□□□□ -1.57
LINC00550-201ENST00000629293 SLC27A1Q6PCB7 646 aa5.23□□□□□ -1.57
LINC00550-201ENST00000629293 TMEM139Q8IV31 216 aa5.23□□□□□ -1.57
LINC00550-201ENST00000629293 MLKLQ8NB16 471 aa5.23□□□□□ -1.57
LINC00550-201ENST00000629293 CCDC112Q8NEF3 446 aa5.23□□□□□ -1.57
LINC00550-201ENST00000629293 PJA1Q8NG27 643 aa5.23□□□□□ -1.57
LINC00550-201ENST00000629293 ENOX1Q8TC92 643 aaKnown RBP5.23□□□□□ -1.57
LINC00550-201ENST00000629293 CPLX3Q8WVH0 158 aa5.23□□□□□ -1.57
LINC00550-201ENST00000629293 CXCL16Q9H2A7 254 aa5.23□□□□□ -1.57
LINC00550-201ENST00000629293 HOOK1Q9UJC3 728 aaKnown RBP5.23□□□□□ -1.57
LINC00550-201ENST00000629293 CDY1Q9Y6F8 540 aa5.23□□□□□ -1.57
LINC00550-201ENST00000629293 PLXNA3P51805 1871 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 CYP3A7-CYP3A51PA0A087WV96 503 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 GFRA2O00451 464 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 PRRG1O14668 218 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 POLR2DO15514 142 aaKnown RBP5.22□□□□□ -1.57
LINC00550-201ENST00000629293 SLITRK3O94933 977 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 BMP15O95972 392 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 THP07101 528 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 CYP3A7P24462 503 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 IGFBP6P24592 240 aaPredicted RBP5.22□□□□□ -1.57
LINC00550-201ENST00000629293 ELF1P32519 619 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 MBTD1Q05BQ5 628 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 DSC1Q08554 894 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 PUM1Q14671 1186 aaKnown RBP eCLIP5.22□□□□□ -1.57
LINC00550-201ENST00000629293 CALCRLQ16602 461 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 GLIPR1L2Q4G1C9 344 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 CT47A1Q5JQC4 288 aaPredicted RBP5.22□□□□□ -1.57
LINC00550-201ENST00000629293 HEATR6Q6AI08 1181 aaKnown RBP5.22□□□□□ -1.57
LINC00550-201ENST00000629293 USP49Q70CQ1 688 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 C4orf19Q8IY42 314 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 EXOC8Q8IYI6 725 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 CLSTN3Q9BQT9 956 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 CORO1BQ9BR76 489 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 ADPGKQ9BRR6 497 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 L2HGDHQ9H9P8 463 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 ZFYVE1Q9HBF4 777 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 KCNMB3Q9NPA1 279 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.22□□□□□ -1.57
LINC00550-201ENST00000629293 CDH7Q9ULB5 785 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 GIT1Q9Y2X7 761 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 C2orf16Q68DN1 1984 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 KANSL1LA0AUZ9 987 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 DGAT1O75907 488 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 KRT37O76014 449 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 MCM7P33993 719 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 UBASH3AP57075 661 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 GRIK3Q13003 919 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 LBRQ14739 615 aaKnown RBP5.22□□□□□ -1.57
LINC00550-201ENST00000629293 MLF2Q15773 248 aaPredicted RBP5.22□□□□□ -1.57
LINC00550-201ENST00000629293 B3GNT9Q6UX72 402 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 ZBTB8OSQ8IWT0 167 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 CMASQ8NFW8 434 aaPredicted RBP5.22□□□□□ -1.57
LINC00550-201ENST00000629293 TTC8Q8TAM2 541 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 TCHPQ9BT92 498 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 NRSN2Q9GZP1 204 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 BRD9Q9H8M2 597 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 CHST7Q9NS84 486 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 ZDHHC7Q9NXF8 308 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 EPS15L1Q9UBC2 864 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 STK39Q9UEW8 545 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 SOX13Q9UN79 622 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 TTC24A2A3L6 582 aaPredicted RBP5.22□□□□□ -1.57
LINC00550-201ENST00000629293 TBX3O15119 743 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 CAPN5O15484 640 aaPredicted RBP5.22□□□□□ -1.57
LINC00550-201ENST00000629293 TUBB4AP04350 444 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 PRKCBP05771 671 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 GCFC2P16383 781 aaKnown RBP5.22□□□□□ -1.57
LINC00550-201ENST00000629293 GJA1P17302 382 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 BRCC3P46736 316 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 TRAPPC10P48553 1259 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 ATP2C1P98194 919 aaPredicted RBP5.22□□□□□ -1.57
LINC00550-201ENST00000629293 TUSC3Q13454 348 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 PRPF4BQ13523 1007 aaKnown RBP5.22□□□□□ -1.57
LINC00550-201ENST00000629293 ZBTB41Q5SVQ8 909 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 C6orf15Q6UXA7 325 aaPredicted RBP5.22□□□□□ -1.57
LINC00550-201ENST00000629293 APTXQ7Z2E3 356 aaKnown RBP5.22□□□□□ -1.57
LINC00550-201ENST00000629293 SLFN12Q8IYM2 578 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 GRAMD1CQ8IYS0 662 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 GSTCDQ8NEC7 633 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms