RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 ATP2C2O75185 946 aa17.62■□□□□ 0.41
TRIM29-221ENST00000627238 TACC1O75410 805 aa17.62■□□□□ 0.41
TRIM29-221ENST00000627238 PRPF6O94906 941 aaKnown RBP17.62■□□□□ 0.41
TRIM29-221ENST00000627238 TNNC2P02585 160 aa17.62■□□□□ 0.41
TRIM29-221ENST00000627238 SYT1P21579 422 aa17.62■□□□□ 0.41
TRIM29-221ENST00000627238 LMO2P25791 158 aa17.62■□□□□ 0.41
TRIM29-221ENST00000627238 OPRD1P41143 372 aa17.62■□□□□ 0.41
TRIM29-221ENST00000627238 CNNM4Q6P4Q7 775 aa17.62■□□□□ 0.41
TRIM29-221ENST00000627238 DENND5BQ6ZUT9 1274 aa17.62■□□□□ 0.41
TRIM29-221ENST00000627238 USP33Q8TEY7 942 aa17.62■□□□□ 0.41
TRIM29-221ENST00000627238 C8orf48Q96LL4 319 aa17.62■□□□□ 0.41
TRIM29-221ENST00000627238 TNMDQ9H2S6 317 aa17.62■□□□□ 0.41
TRIM29-221ENST00000627238 LINC00597Q9H2U6 94 aa17.62■□□□□ 0.41
TRIM29-221ENST00000627238 TRPM5Q9NZQ8 1165 aa17.62■□□□□ 0.41
TRIM29-221ENST00000627238 R3HCC1Q9Y3T6 440 aaKnown RBP17.62■□□□□ 0.41
TRIM29-221ENST00000627238 WDFY3Q8IZQ1 3526 aa17.61■□□□□ 0.41
TRIM29-221ENST00000627238 ZNF840PA6NDX5 716 aa17.61■□□□□ 0.41
TRIM29-221ENST00000627238 K7EQS6 105 aa17.61■□□□□ 0.41
TRIM29-221ENST00000627238 TRIM66O15016 1216 aa17.61■□□□□ 0.41
TRIM29-221ENST00000627238 EIF3DO15371 548 aaKnown RBP eCLIP17.61■□□□□ 0.41
TRIM29-221ENST00000627238 STAU1O95793 577 aaKnown RBP17.61■□□□□ 0.41
TRIM29-221ENST00000627238 CHRM1P11229 460 aaPredicted RBP17.61■□□□□ 0.41
TRIM29-221ENST00000627238 BDNFP23560 247 aa17.61■□□□□ 0.41
TRIM29-221ENST00000627238 EIF2DP41214 584 aaKnown RBP17.61■□□□□ 0.41
TRIM29-221ENST00000627238 NASPP49321 788 aaPredicted RBP17.61■□□□□ 0.41
TRIM29-221ENST00000627238 PMS2CLQ68D20 193 aa17.61■□□□□ 0.41
TRIM29-221ENST00000627238 CBWD2Q8IUF1 395 aa17.61■□□□□ 0.41
TRIM29-221ENST00000627238 MYCBPAPQ8TBZ2 947 aa17.61■□□□□ 0.41
TRIM29-221ENST00000627238 PCED1BQ96HM7 432 aa17.61■□□□□ 0.41
TRIM29-221ENST00000627238 CNOT6LQ96LI5 555 aaKnown RBP17.61■□□□□ 0.41
TRIM29-221ENST00000627238 LRRC27Q9C0I9 530 aa17.61■□□□□ 0.41
TRIM29-221ENST00000627238 CUEDC2Q9H467 287 aa17.61■□□□□ 0.41
TRIM29-221ENST00000627238 KBTBD4Q9NVX7 518 aa17.61■□□□□ 0.41
TRIM29-221ENST00000627238 MMP17Q9ULZ9 603 aa17.61■□□□□ 0.41
TRIM29-221ENST00000627238 A0A0A0MRY4 1105 aa17.6■□□□□ 0.41
TRIM29-221ENST00000627238 LEFTY2O00292 366 aa17.6■□□□□ 0.41
TRIM29-221ENST00000627238 KCNK5O95279 499 aa17.6■□□□□ 0.41
TRIM29-221ENST00000627238 OAS1P00973 400 aaKnown RBP17.6■□□□□ 0.41
TRIM29-221ENST00000627238 HOXD13P35453 343 aa17.6■□□□□ 0.41
TRIM29-221ENST00000627238 USP46P62068 366 aa17.6■□□□□ 0.41
TRIM29-221ENST00000627238 PSMC1P62191 440 aaKnown RBP17.6■□□□□ 0.41
TRIM29-221ENST00000627238 MRPS21P82921 87 aaKnown RBP17.6■□□□□ 0.41
TRIM29-221ENST00000627238 E2F4Q16254 413 aa17.6■□□□□ 0.41
TRIM29-221ENST00000627238 HSF5Q4G112 596 aaPredicted RBP17.6■□□□□ 0.41
TRIM29-221ENST00000627238 LMBRD2Q68DH5 695 aaPredicted RBP17.6■□□□□ 0.41
TRIM29-221ENST00000627238 RNF43Q68DV7 783 aa17.6■□□□□ 0.41
TRIM29-221ENST00000627238 FAM173BQ6P4H8 233 aa17.6■□□□□ 0.41
TRIM29-221ENST00000627238 EPM2AIP1Q7L775 607 aaPredicted RBP17.6■□□□□ 0.41
TRIM29-221ENST00000627238 TRAPPC11Q7Z392 1133 aa17.6■□□□□ 0.41
TRIM29-221ENST00000627238 ADGRG2Q8IZP9 1017 aa17.6■□□□□ 0.41
TRIM29-221ENST00000627238 TSTD1Q8NFU3 115 aa17.6■□□□□ 0.41
TRIM29-221ENST00000627238 OLIG1Q8TAK6 271 aa17.6■□□□□ 0.41
TRIM29-221ENST00000627238 USP28Q96RU2 1077 aa17.6■□□□□ 0.41
TRIM29-221ENST00000627238 DUSP9Q99956 384 aaKnown RBP17.6■□□□□ 0.41
TRIM29-221ENST00000627238 TRIM9Q9C026 710 aa17.6■□□□□ 0.41
TRIM29-221ENST00000627238 SMOC1Q9H4F8 434 aa17.6■□□□□ 0.41
TRIM29-221ENST00000627238 HSPBP1Q9NZL4 362 aa17.6■□□□□ 0.41
TRIM29-221ENST00000627238 PLXND1Q9Y4D7 1925 aa17.59■□□□□ 0.41
TRIM29-221ENST00000627238 SLC9A3R1O14745 358 aaPredicted RBP17.59■□□□□ 0.41
TRIM29-221ENST00000627238 DCLK1O15075 740 aa17.59■□□□□ 0.41
TRIM29-221ENST00000627238 CAVIN2O95810 425 aa17.59■□□□□ 0.41
TRIM29-221ENST00000627238 ANXA13P27216 316 aa17.59■□□□□ 0.41
TRIM29-221ENST00000627238 GRIK1P39086 918 aa17.59■□□□□ 0.41
TRIM29-221ENST00000627238 DGKEP52429 567 aa17.59■□□□□ 0.41
TRIM29-221ENST00000627238 SNRPFP62306 86 aaKnown RBP17.59■□□□□ 0.41
TRIM29-221ENST00000627238 CRY1Q16526 586 aa17.59■□□□□ 0.41
TRIM29-221ENST00000627238 USP39Q53GS9 565 aaKnown RBP17.59■□□□□ 0.41
TRIM29-221ENST00000627238 GLIS3Q8NEA6 775 aa17.59■□□□□ 0.41
TRIM29-221ENST00000627238 ZNF507Q8TCN5 953 aa17.59■□□□□ 0.41
TRIM29-221ENST00000627238 INTS4Q96HW7 963 aaKnown RBP17.59■□□□□ 0.41
TRIM29-221ENST00000627238 EDEM2Q9BV94 578 aa17.59■□□□□ 0.41
TRIM29-221ENST00000627238 RNF38Q9H0F5 515 aa17.59■□□□□ 0.41
TRIM29-221ENST00000627238 ZSCAN16Q9H4T2 348 aaPredicted RBP17.59■□□□□ 0.41
TRIM29-221ENST00000627238 NME7Q9Y5B8 376 aa17.59■□□□□ 0.41
TRIM29-221ENST00000627238 ABCA7Q8IZY2 2146 aa17.59■□□□□ 0.41
TRIM29-221ENST00000627238 UBE4BO95155 1302 aa17.58■□□□□ 0.4
TRIM29-221ENST00000627238 CYP17A1P05093 508 aa17.58■□□□□ 0.4
TRIM29-221ENST00000627238 CREB5Q02930 508 aa17.58■□□□□ 0.4
TRIM29-221ENST00000627238 PSMD2Q13200 908 aa17.58■□□□□ 0.4
TRIM29-221ENST00000627238 PSMD6Q15008 389 aa17.58■□□□□ 0.4
TRIM29-221ENST00000627238 TCEAL6Q6IPX3 200 aa17.58■□□□□ 0.4
TRIM29-221ENST00000627238 OVCA2Q8WZ82 227 aa17.58■□□□□ 0.4
TRIM29-221ENST00000627238 TCEAL3Q969E4 200 aa17.58■□□□□ 0.4
TRIM29-221ENST00000627238 CHAMP1Q96JM3 812 aa17.58■□□□□ 0.4
TRIM29-221ENST00000627238 ELOVL4Q9GZR5 314 aa17.58■□□□□ 0.4
TRIM29-221ENST00000627238 MTMR6Q9Y217 621 aa17.58■□□□□ 0.4
TRIM29-221ENST00000627238 ZZEF1O43149 2961 aa17.58■□□□□ 0.4
TRIM29-221ENST00000627238 THADAQ6YHU6 1953 aa17.57■□□□□ 0.4
TRIM29-221ENST00000627238 TNRC6BQ9UPQ9 1833 aaKnown RBP17.57■□□□□ 0.4
TRIM29-221ENST00000627238 LNP1A1A4G5 178 aa17.57■□□□□ 0.4
TRIM29-221ENST00000627238 F8VP50 259 aa17.57■□□□□ 0.4
TRIM29-221ENST00000627238 CST3P01034 146 aaPredicted RBP17.57■□□□□ 0.4
TRIM29-221ENST00000627238 PDGFRBP09619 1106 aa17.57■□□□□ 0.4
TRIM29-221ENST00000627238 GNL1P36915 607 aaPredicted RBP17.57■□□□□ 0.4
TRIM29-221ENST00000627238 CYP27A1Q02318 531 aa17.57■□□□□ 0.4
TRIM29-221ENST00000627238 CEBPZQ03701 1054 aaKnown RBP17.57■□□□□ 0.4
TRIM29-221ENST00000627238 EHHADHQ08426 723 aa17.57■□□□□ 0.4
TRIM29-221ENST00000627238 DHCR24Q15392 516 aa17.57■□□□□ 0.4
TRIM29-221ENST00000627238 SNRNP35Q16560 246 aaKnown RBP17.57■□□□□ 0.4
TRIM29-221ENST00000627238 FILIP1Q7Z7B0 1213 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms