RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 C4orf50Q6ZRC1 276 aa7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 UBE2Q1Q7Z7E8 422 aa7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 PHLDB2Q86SQ0 1253 aa7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 FAM35AQ86V20 835 aa7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 RHOT1Q8IXI2 618 aa7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 DCP1BQ8IZD4 617 aaKnown RBP7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 FUKQ8N0W3 1084 aa7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 RASGEF1CQ8N431 466 aa7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 ACTRT1Q8TDG2 376 aa7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 KCTD13Q8WZ19 329 aa7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 UBXN4Q92575 508 aa7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 CD101Q93033 1021 aa7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 TOP1MTQ969P6 601 aa7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 SMARCD1Q96GM5 515 aa7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 BTBD6Q96KE9 485 aa7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 PSMB7Q99436 277 aa7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 NAP1L3Q99457 506 aaPredicted RBP7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 NCAPGQ9BPX3 1015 aa7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 LPIN3Q9BQK8 851 aa7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 OXCT2Q9BYC2 517 aaPredicted RBP7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 B3GNT5Q9BYG0 378 aa7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 UBXN6Q9BZV1 441 aa7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 IL23AQ9NPF7 189 aa7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 CRTAC1Q9NQ79 661 aa7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 METTL5Q9NRN9 209 aaKnown RBP7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 DNAJB4Q9UDY4 337 aa7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 TTC7AQ9ULT0 858 aaPredicted RBP7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 PRG3Q9Y2Y8 225 aaPredicted RBP7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 PCDHA3Q9Y5H8 950 aa7.94□□□□□ -1.14
PTP4A1-206ENST00000627002 A0A1W2PPC1 479 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 MYBPHLA2RUH7 354 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 OR6C75A6NL08 312 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 H7C4K7 107 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 PGRMC1O00264 195 aaKnown RBP7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 DYNC1I1O14576 645 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 SNPHO15079 494 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 CEP104O60308 925 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 AP1G2O75843 785 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 FBXO21O94952 628 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 UPP2O95045 317 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 GALTP07902 379 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 PSMA2P25787 234 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 ITGB8P26012 769 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 RFC1P35251 1148 aaPredicted RBP7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 CETN2P41208 172 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 ALDH7A1P49419 539 aaKnown RBP7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 RGS7P49802 495 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 GATMP50440 423 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 PEX5P50542 639 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 BCAR1P56945 870 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 WDR5P61964 334 aaKnown RBP7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 RPL7AP62424 266 aaKnown RBP7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 SLC6A3Q01959 620 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 SMARCB1Q12824 385 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 PTPROQ16827 1216 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 EFHC1Q5JVL4 640 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 SEL1L2Q5TEA6 688 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 LRRC38Q5VT99 294 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 KIAA0319Q5VV43 1072 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 ZNF280DQ6N043 979 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 CCDC70Q6NSX1 233 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 FUT10Q6P4F1 479 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 FAM183BPQ6ZVS7 135 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 PAQR9Q6ZVX9 377 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 RSRC2Q7L4I2 434 aaKnown RBP7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 ARCQ7LC44 396 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 SPATA2LQ8IUW3 424 aaPredicted RBP7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 VWCEQ96DN2 955 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 PCED1BQ96HM7 432 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 PKMYT1Q99640 499 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 RTP3Q9BQQ7 232 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.93□□□□□ -1.146e-11■□□□□ 9.1
PTP4A1-206ENST00000627002 TRIM7Q9C029 511 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 LRRC4Q9HBW1 653 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 CSNK1G1Q9HCP0 422 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 PNPLA8Q9NP80 782 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 PLSCR2Q9NRY7 297 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 KRT82Q9NSB4 513 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 ASNSD1Q9NWL6 643 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 TJP2Q9UDY2 1190 aa7.93□□□□□ -1.14
PTP4A1-206ENST00000627002 F8W810 466 aa7.92□□□□□ -1.14
PTP4A1-206ENST00000627002 TULP2O00295 520 aa7.92□□□□□ -1.14
PTP4A1-206ENST00000627002 PDE2AO00408 941 aaPredicted RBP7.92□□□□□ -1.14
PTP4A1-206ENST00000627002 CLDN5O00501 218 aa7.92□□□□□ -1.14
PTP4A1-206ENST00000627002 DPYSL4O14531 572 aa7.92□□□□□ -1.14
PTP4A1-206ENST00000627002 PAPSS1O43252 624 aaPredicted RBP7.92□□□□□ -1.14
PTP4A1-206ENST00000627002 SART1O43290 800 aaKnown RBP7.92□□□□□ -1.14
PTP4A1-206ENST00000627002 RNF8O76064 485 aa7.92□□□□□ -1.14
PTP4A1-206ENST00000627002 GJB6O95452 261 aa7.92□□□□□ -1.14
PTP4A1-206ENST00000627002 GLI1P08151 1106 aa7.92□□□□□ -1.14
PTP4A1-206ENST00000627002 KRT7P08729 469 aa7.92□□□□□ -1.14
PTP4A1-206ENST00000627002 LCP1P13796 627 aa7.92□□□□□ -1.14
PTP4A1-206ENST00000627002 GPD1P21695 349 aa7.92□□□□□ -1.14
PTP4A1-206ENST00000627002 FGFR3P22607 806 aa7.92□□□□□ -1.14
PTP4A1-206ENST00000627002 SSR1P43307 286 aaKnown RBP7.92□□□□□ -1.14
PTP4A1-206ENST00000627002 ZNF143P52747 638 aaPredicted RBP7.92□□□□□ -1.14
PTP4A1-206ENST00000627002 MAP3K7CLP57077 242 aa7.92□□□□□ -1.14
PTP4A1-206ENST00000627002 FPGSQ05932 587 aa7.92□□□□□ -1.14
PTP4A1-206ENST00000627002 MRPL58Q14197 206 aaKnown RBP7.92□□□□□ -1.14
PTP4A1-206ENST00000627002 PPP2R5EQ16537 467 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms