RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 C2orf78A6NCI8 922 aa20.46■□□□□ 0.87
ATG4B-226ENST00000625810 A8MXQ7 604 aa20.46■□□□□ 0.87
ATG4B-226ENST00000625810 TRDMT1O14717 391 aaKnown RBP20.46■□□□□ 0.87
ATG4B-226ENST00000625810 ACTN4O43707 911 aaKnown RBP20.46■□□□□ 0.87
ATG4B-226ENST00000625810 KLRC4O43908 158 aa20.46■□□□□ 0.87
ATG4B-226ENST00000625810 RETP07949 1114 aa20.46■□□□□ 0.87
ATG4B-226ENST00000625810 PTPN1P18031 435 aaKnown RBP20.46■□□□□ 0.87
ATG4B-226ENST00000625810 SDHBP21912 280 aa20.46■□□□□ 0.87
ATG4B-226ENST00000625810 HOXA6P31267 233 aa20.46■□□□□ 0.87
ATG4B-226ENST00000625810 CASP4P49662 377 aa20.46■□□□□ 0.87
ATG4B-226ENST00000625810 PDE6CP51160 858 aa20.46■□□□□ 0.87
ATG4B-226ENST00000625810 ATXN1P54253 815 aaKnown RBP20.46■□□□□ 0.87
ATG4B-226ENST00000625810 SPEM2Q0P670 501 aa20.46■□□□□ 0.87
ATG4B-226ENST00000625810 STK4Q13043 487 aa20.46■□□□□ 0.87
ATG4B-226ENST00000625810 PSMD2Q13200 908 aa20.46■□□□□ 0.87
ATG4B-226ENST00000625810 TMEM196Q5HYL7 178 aa20.46■□□□□ 0.87
ATG4B-226ENST00000625810 FSTL4Q6MZW2 842 aa20.46■□□□□ 0.87
ATG4B-226ENST00000625810 PKN3Q6P5Z2 889 aa20.46■□□□□ 0.87
ATG4B-226ENST00000625810 OSCP1Q8WVF1 389 aa20.46■□□□□ 0.87
ATG4B-226ENST00000625810 GCNT4Q9P109 453 aa20.46■□□□□ 0.87
ATG4B-226ENST00000625810 PTPRDP23468 1912 aa20.45■□□□□ 0.86
ATG4B-226ENST00000625810 A0A1B0GVL5 298 aa20.45■□□□□ 0.86
ATG4B-226ENST00000625810 F8VP50 259 aa20.45■□□□□ 0.86
ATG4B-226ENST00000625810 ATG13O75143 517 aa20.45■□□□□ 0.86
ATG4B-226ENST00000625810 STAU1O95793 577 aaKnown RBP20.45■□□□□ 0.86
ATG4B-226ENST00000625810 CNR2P34972 360 aa20.45■□□□□ 0.86
ATG4B-226ENST00000625810 AP3M2P53677 418 aa20.45■□□□□ 0.86
ATG4B-226ENST00000625810 ZNF77Q15935 545 aa20.45■□□□□ 0.86
ATG4B-226ENST00000625810 KMT5BQ4FZB7 885 aa20.45■□□□□ 0.86
ATG4B-226ENST00000625810 SH3RF2Q8TEC5 729 aa20.45■□□□□ 0.86
ATG4B-226ENST00000625810 SPATA32Q96LK8 384 aa20.45■□□□□ 0.86
ATG4B-226ENST00000625810 C8orf48Q96LL4 319 aa20.45■□□□□ 0.86
ATG4B-226ENST00000625810 ECT2Q9H8V3 914 aa20.45■□□□□ 0.86
ATG4B-226ENST00000625810 USP25Q9UHP3 1055 aa20.45■□□□□ 0.86
ATG4B-226ENST00000625810 CDV3Q9UKY7 258 aaKnown RBP20.45■□□□□ 0.86
ATG4B-226ENST00000625810 NME7Q9Y5B8 376 aa20.45■□□□□ 0.86
ATG4B-226ENST00000625810 WNT6Q9Y6F9 365 aa20.45■□□□□ 0.86
ATG4B-226ENST00000625810 ABL1P00519 1130 aa20.44■□□□□ 0.86
ATG4B-226ENST00000625810 PFKFB1P16118 471 aa20.44■□□□□ 0.86
ATG4B-226ENST00000625810 CMA1P23946 247 aa20.44■□□□□ 0.86
ATG4B-226ENST00000625810 GJA4P35212 333 aa20.44■□□□□ 0.86
ATG4B-226ENST00000625810 GALK1P51570 392 aa20.44■□□□□ 0.86
ATG4B-226ENST00000625810 USP46P62068 366 aa20.44■□□□□ 0.86
ATG4B-226ENST00000625810 KRT85P78386 507 aa20.44■□□□□ 0.86
ATG4B-226ENST00000625810 USP4Q13107 963 aa20.44■□□□□ 0.86
ATG4B-226ENST00000625810 NR1H3Q13133 447 aa20.44■□□□□ 0.86
ATG4B-226ENST00000625810 ZNF667Q5HYK9 610 aa20.44■□□□□ 0.86
ATG4B-226ENST00000625810 TDRD10Q5VZ19 366 aaKnown RBP20.44■□□□□ 0.86
ATG4B-226ENST00000625810 CEP68Q76N32 757 aa20.44■□□□□ 0.86
ATG4B-226ENST00000625810 WDR5BQ86VZ2 330 aa20.44■□□□□ 0.86
ATG4B-226ENST00000625810 KIAA0895Q8NCT3 520 aa20.44■□□□□ 0.86
ATG4B-226ENST00000625810 ATP2A3Q93084 1043 aa20.44■□□□□ 0.86
ATG4B-226ENST00000625810 P2RY13Q9BPV8 354 aa20.44■□□□□ 0.86
ATG4B-226ENST00000625810 ELOVL4Q9GZR5 314 aa20.44■□□□□ 0.86
ATG4B-226ENST00000625810 GZF1Q9H116 711 aaPredicted RBP20.44■□□□□ 0.86
ATG4B-226ENST00000625810 DPEP3Q9H4B8 488 aa20.44■□□□□ 0.86
ATG4B-226ENST00000625810 SLC8A2Q9UPR5 921 aa20.44■□□□□ 0.86
ATG4B-226ENST00000625810 SPTBN2O15020 2390 aa20.43■□□□□ 0.86
ATG4B-226ENST00000625810 LRRIQ3A6PVS8 624 aaPredicted RBP20.43■□□□□ 0.86
ATG4B-226ENST00000625810 LRP3O75074 770 aa20.43■□□□□ 0.86
ATG4B-226ENST00000625810 EGFP01133 1207 aa20.43■□□□□ 0.86
ATG4B-226ENST00000625810 PFKLP17858 780 aa20.43■□□□□ 0.86
ATG4B-226ENST00000625810 DRD1P21728 446 aa20.43■□□□□ 0.86
ATG4B-226ENST00000625810 PPP3CCP48454 512 aa20.43■□□□□ 0.86
ATG4B-226ENST00000625810 IFRD2Q12894 506 aaPredicted RBP20.43■□□□□ 0.86
ATG4B-226ENST00000625810 ZNF699Q32M78 642 aa20.43■□□□□ 0.86
ATG4B-226ENST00000625810 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.43■□□□□ 0.86
ATG4B-226ENST00000625810 B3GALNT2Q8NCR0 500 aa20.43■□□□□ 0.86
ATG4B-226ENST00000625810 PLEKHO2Q8TD55 490 aa20.43■□□□□ 0.86
ATG4B-226ENST00000625810 PARD3BQ8TEW8 1205 aa20.43■□□□□ 0.86
ATG4B-226ENST00000625810 XYLT2Q9H1B5 865 aa20.43■□□□□ 0.86
ATG4B-226ENST00000625810 ARHGAP26Q9UNA1 814 aa20.43■□□□□ 0.86
ATG4B-226ENST00000625810 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.43■□□□□ 0.86
ATG4B-226ENST00000625810 CLDN5O00501 218 aa20.42■□□□□ 0.86
ATG4B-226ENST00000625810 RNF40O75150 1001 aa20.42■□□□□ 0.86
ATG4B-226ENST00000625810 MYL1P05976 194 aa20.42■□□□□ 0.86
ATG4B-226ENST00000625810 CDH8P55286 799 aa20.42■□□□□ 0.86
ATG4B-226ENST00000625810 NOP14P78316 857 aaKnown RBP20.42■□□□□ 0.86
ATG4B-226ENST00000625810 NCOA4Q13772 614 aa20.42■□□□□ 0.86
ATG4B-226ENST00000625810 EML3Q32P44 896 aa20.42■□□□□ 0.86
ATG4B-226ENST00000625810 NAIF1Q69YI7 327 aaPredicted RBP20.42■□□□□ 0.86
ATG4B-226ENST00000625810 SLC9A9Q8IVB4 645 aa20.42■□□□□ 0.86
ATG4B-226ENST00000625810 CD101Q93033 1021 aa20.42■□□□□ 0.86
ATG4B-226ENST00000625810 CCDC47Q96A33 483 aaKnown RBP20.42■□□□□ 0.86
ATG4B-226ENST00000625810 SLITRK1Q96PX8 696 aa20.42■□□□□ 0.86
ATG4B-226ENST00000625810 MED10Q9BTT4 135 aa20.42■□□□□ 0.86
ATG4B-226ENST00000625810 TTLL2Q9BWV7 592 aa20.42■□□□□ 0.86
ATG4B-226ENST00000625810 B3GNT5Q9BYG0 378 aa20.42■□□□□ 0.86
ATG4B-226ENST00000625810 ZNF518BQ9C0D4 1074 aa20.42■□□□□ 0.86
ATG4B-226ENST00000625810 SMYD3Q9H7B4 428 aa20.42■□□□□ 0.86
ATG4B-226ENST00000625810 FBRSL1Q9HCM7 1045 aaKnown RBP20.42■□□□□ 0.86
ATG4B-226ENST00000625810 DMAC2Q9NW81 257 aa20.42■□□□□ 0.86
ATG4B-226ENST00000625810 ATP8B3O60423 1300 aa20.42■□□□□ 0.86
ATG4B-226ENST00000625810 RALGAPA1Q6GYQ0 2036 aa20.41■□□□□ 0.86
ATG4B-226ENST00000625810 ZNF840PA6NDX5 716 aa20.41■□□□□ 0.86
ATG4B-226ENST00000625810 PDXKO00764 312 aa20.41■□□□□ 0.86
ATG4B-226ENST00000625810 C4BPAP04003 597 aaKnown RBP20.41■□□□□ 0.86
ATG4B-226ENST00000625810 NR3C1P04150 777 aa20.41■□□□□ 0.86
ATG4B-226ENST00000625810 TCF3P15923 654 aa20.41■□□□□ 0.86
ATG4B-226ENST00000625810 SYKP43405 635 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms