RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 EDRF1Q3B7T1 1238 aa13.9□□□□□ -0.18
ATRX-208ENST00000622960 ZACNQ401N2 412 aa13.9□□□□□ -0.18
ATRX-208ENST00000622960 TMEM150AQ86TG1 271 aa13.9□□□□□ -0.18
ATRX-208ENST00000622960 ADSSL1Q8N142 457 aa13.9□□□□□ -0.18
ATRX-208ENST00000622960 SYNPOQ8N3V7 929 aa13.9□□□□□ -0.18
ATRX-208ENST00000622960 SMARCD1Q96GM5 515 aa13.9□□□□□ -0.18
ATRX-208ENST00000622960 MMRN2Q9H8L6 949 aa13.9□□□□□ -0.18
ATRX-208ENST00000622960 DMAP1Q9NPF5 467 aaPredicted RBP13.9□□□□□ -0.18
ATRX-208ENST00000622960 PRMT8Q9NR22 394 aaPredicted RBP13.9□□□□□ -0.18
ATRX-208ENST00000622960 ZSCAN32Q9NX65 697 aa13.9□□□□□ -0.18
ATRX-208ENST00000622960 RAB23Q9ULC3 237 aa13.9□□□□□ -0.18
ATRX-208ENST00000622960 CCL26Q9Y258 94 aa13.9□□□□□ -0.18
ATRX-208ENST00000622960 ZNF638Q14966 1978 aaKnown RBP13.9□□□□□ -0.18
ATRX-208ENST00000622960 CACNA1HO95180 2353 aa13.89□□□□□ -0.19
ATRX-208ENST00000622960 CETN3O15182 167 aa13.89□□□□□ -0.19
ATRX-208ENST00000622960 RAP1GAPP47736 663 aa13.89□□□□□ -0.19
ATRX-208ENST00000622960 CXCL12P48061 93 aa13.89□□□□□ -0.19
ATRX-208ENST00000622960 DLG4P78352 724 aa13.89□□□□□ -0.19
ATRX-208ENST00000622960 TNK2Q07912 1038 aa13.89□□□□□ -0.19
ATRX-208ENST00000622960 PON2Q15165 354 aa13.89□□□□□ -0.19
ATRX-208ENST00000622960 SV2AQ7L0J3 742 aa13.89□□□□□ -0.19
ATRX-208ENST00000622960 FAM35AQ86V20 835 aa13.89□□□□□ -0.19
ATRX-208ENST00000622960 UNC93AQ86WB7 457 aa13.89□□□□□ -0.19
ATRX-208ENST00000622960 DDX42Q86XP3 938 aaKnown RBP eCLIP13.89□□□□□ -0.19
ATRX-208ENST00000622960 SPEM1Q8N4L4 309 aa13.89□□□□□ -0.19
ATRX-208ENST00000622960 ARL14EPQ8N8R7 260 aaPredicted RBP13.89□□□□□ -0.19
ATRX-208ENST00000622960 PLEKHO2Q8TD55 490 aa13.89□□□□□ -0.19
ATRX-208ENST00000622960 SMARCE1Q969G3 411 aa13.89□□□□□ -0.19
ATRX-208ENST00000622960 GSDMAQ96QA5 445 aa13.89□□□□□ -0.19
ATRX-208ENST00000622960 TTLL2Q9BWV7 592 aa13.89□□□□□ -0.19
ATRX-208ENST00000622960 ZNF518BQ9C0D4 1074 aa13.89□□□□□ -0.19
ATRX-208ENST00000622960 GZF1Q9H116 711 aaPredicted RBP13.89□□□□□ -0.19
ATRX-208ENST00000622960 DPEP3Q9H4B8 488 aa13.89□□□□□ -0.19
ATRX-208ENST00000622960 EBF3Q9H4W6 596 aa13.89□□□□□ -0.19
ATRX-208ENST00000622960 DUS2Q9NX74 493 aaKnown RBP13.89□□□□□ -0.19
ATRX-208ENST00000622960 DENND4CQ5VZ89 1909 aa13.89□□□□□ -0.19
ATRX-208ENST00000622960 TADA3O75528 432 aa13.88□□□□□ -0.19
ATRX-208ENST00000622960 AKAP3O75969 853 aa13.88□□□□□ -0.19
ATRX-208ENST00000622960 NFATC1O95644 943 aa13.88□□□□□ -0.19
ATRX-208ENST00000622960 ASS1P00966 412 aaKnown RBP13.88□□□□□ -0.19
ATRX-208ENST00000622960 HLA-DRAP01903 254 aa13.88□□□□□ -0.19
ATRX-208ENST00000622960 CHRNB1P11230 501 aa13.88□□□□□ -0.19
ATRX-208ENST00000622960 YWHAQP27348 245 aa13.88□□□□□ -0.19
ATRX-208ENST00000622960 PPP1R2P41236 205 aa13.88□□□□□ -0.19
ATRX-208ENST00000622960 CDH8P55286 799 aa13.88□□□□□ -0.19
ATRX-208ENST00000622960 USP4Q13107 963 aa13.88□□□□□ -0.19
ATRX-208ENST00000622960 PNOCQ13519 176 aa13.88□□□□□ -0.19
ATRX-208ENST00000622960 TCERG1LQ5VWI1 586 aa13.88□□□□□ -0.19
ATRX-208ENST00000622960 NUP93Q8N1F7 819 aa13.88□□□□□ -0.19
ATRX-208ENST00000622960 TTC39CQ8N584 583 aa13.88□□□□□ -0.19
ATRX-208ENST00000622960 CCDC26Q8TAB7 109 aa13.88□□□□□ -0.19
ATRX-208ENST00000622960 SH3RF2Q8TEC5 729 aa13.88□□□□□ -0.19
ATRX-208ENST00000622960 OSCP1Q8WVF1 389 aa13.88□□□□□ -0.19
ATRX-208ENST00000622960 OVCA2Q8WZ82 227 aa13.88□□□□□ -0.19
ATRX-208ENST00000622960 FBXO32Q969P5 355 aa13.88□□□□□ -0.19
ATRX-208ENST00000622960 LRRC3BQ96PB8 259 aa13.88□□□□□ -0.19
ATRX-208ENST00000622960 NACA2Q9H009 215 aa13.88□□□□□ -0.19
ATRX-208ENST00000622960 KRT82Q9NSB4 513 aa13.88□□□□□ -0.19
ATRX-208ENST00000622960 NCDNQ9UBB6 729 aa13.88□□□□□ -0.19
ATRX-208ENST00000622960 ARHGAP26Q9UNA1 814 aa13.88□□□□□ -0.19
ATRX-208ENST00000622960 KIF26AQ9ULI4 1882 aaPredicted RBP13.87□□□□□ -0.19
ATRX-208ENST00000622960 C2orf78A6NCI8 922 aa13.87□□□□□ -0.19
ATRX-208ENST00000622960 SLC9A3R1O14745 358 aaPredicted RBP13.87□□□□□ -0.19
ATRX-208ENST00000622960 ATG13O75143 517 aa13.87□□□□□ -0.19
ATRX-208ENST00000622960 AP1G2O75843 785 aa13.87□□□□□ -0.19
ATRX-208ENST00000622960 VNN1O95497 513 aa13.87□□□□□ -0.19
ATRX-208ENST00000622960 TRIM49P0CI25 452 aa13.87□□□□□ -0.19
ATRX-208ENST00000622960 TRIM49CP0CI26 452 aa13.87□□□□□ -0.19
ATRX-208ENST00000622960 GTF2H1P32780 548 aa13.87□□□□□ -0.19
ATRX-208ENST00000622960 GCLMP48507 274 aa13.87□□□□□ -0.19
ATRX-208ENST00000622960 MXI1P50539 228 aa13.87□□□□□ -0.19
ATRX-208ENST00000622960 ZNF77Q15935 545 aa13.87□□□□□ -0.19
ATRX-208ENST00000622960 WDR44Q5JSH3 913 aa13.87□□□□□ -0.19
ATRX-208ENST00000622960 ZNF658Q5TYW1 1059 aaPredicted RBP13.87□□□□□ -0.19
ATRX-208ENST00000622960 KRT39Q6A163 491 aa13.87□□□□□ -0.19
ATRX-208ENST00000622960 TRIM68Q6AZZ1 485 aa13.87□□□□□ -0.19
ATRX-208ENST00000622960 MAMSTRQ6ZN01 415 aa13.87□□□□□ -0.19
ATRX-208ENST00000622960 ACOT1Q86TX2 421 aa13.87□□□□□ -0.19
ATRX-208ENST00000622960 MAML2Q8IZL2 1156 aaPredicted RBP13.87□□□□□ -0.19
ATRX-208ENST00000622960 FMR1NBQ8N0W7 255 aaPredicted RBP13.87□□□□□ -0.19
ATRX-208ENST00000622960 RUBCNQ92622 972 aa13.87□□□□□ -0.19
ATRX-208ENST00000622960 CYP2S1Q96SQ9 504 aa13.87□□□□□ -0.19
ATRX-208ENST00000622960 FAM83CQ9BQN1 747 aa13.87□□□□□ -0.19
ATRX-208ENST00000622960 B3GNT5Q9BYG0 378 aa13.87□□□□□ -0.19
ATRX-208ENST00000622960 NIF3L1Q9GZT8 377 aa13.87□□□□□ -0.19
ATRX-208ENST00000622960 CYP3A43Q9HB55 503 aa13.87□□□□□ -0.19
ATRX-208ENST00000622960 TMEM8AQ9HCN3 771 aa13.87□□□□□ -0.19
ATRX-208ENST00000622960 PTPRDP23468 1912 aa13.87□□□□□ -0.19
ATRX-208ENST00000622960 HELZP42694 1942 aaKnown RBP13.86□□□□□ -0.19
ATRX-208ENST00000622960 SHISA7A6NL88 538 aa13.86□□□□□ -0.19
ATRX-208ENST00000622960 CLDN5O00501 218 aa13.86□□□□□ -0.19
ATRX-208ENST00000622960 PSMA7O14818 248 aa13.86□□□□□ -0.19
ATRX-208ENST00000622960 SLC16A3O15427 465 aaKnown RBP13.86□□□□□ -0.19
ATRX-208ENST00000622960 FAM200BP0CF97 657 aa13.86□□□□□ -0.19
ATRX-208ENST00000622960 MBL2P11226 248 aaPredicted RBP13.86□□□□□ -0.19
ATRX-208ENST00000622960 TCF3P15923 654 aa13.86□□□□□ -0.19
ATRX-208ENST00000622960 NDST1P52848 882 aa13.86□□□□□ -0.19
ATRX-208ENST00000622960 USP46P62068 366 aa13.86□□□□□ -0.19
ATRX-208ENST00000622960 LRRC63Q05C16 580 aa13.86□□□□□ -0.19
ATRX-208ENST00000622960 TAF10Q12962 218 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms