RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 UNGP13051 313 aaPredicted RBP13.02□□□□□ -0.33
LITAF-221ENST00000622633 IVDP26440 423 aa13.02□□□□□ -0.33
LITAF-221ENST00000622633 SSTR3P32745 418 aaPredicted RBP13.02□□□□□ -0.33
LITAF-221ENST00000622633 ITGA8P53708 1063 aa13.02□□□□□ -0.33
LITAF-221ENST00000622633 AP1B1Q10567 949 aa13.02□□□□□ -0.33
LITAF-221ENST00000622633 ITGA9Q13797 1035 aa13.02□□□□□ -0.33
LITAF-221ENST00000622633 KYNUQ16719 465 aa13.02□□□□□ -0.33
LITAF-221ENST00000622633 TAOK1Q7L7X3 1001 aa13.02□□□□□ -0.33
LITAF-221ENST00000622633 SATL1Q86VE3 508 aa13.02□□□□□ -0.33
LITAF-221ENST00000622633 FBXO41Q8TF61 875 aa13.02□□□□□ -0.33
LITAF-221ENST00000622633 ARHGEF2Q92974 986 aaKnown RBP13.02□□□□□ -0.33
LITAF-221ENST00000622633 SPATA17Q96L03 361 aa13.02□□□□□ -0.33
LITAF-221ENST00000622633 PDCD2LQ9BRP1 358 aa13.02□□□□□ -0.33
LITAF-221ENST00000622633 HGH1Q9BTY7 390 aa13.02□□□□□ -0.33
LITAF-221ENST00000622633 PLVAPQ9BX97 442 aa13.02□□□□□ -0.33
LITAF-221ENST00000622633 EPB41L1Q9H4G0 881 aa13.02□□□□□ -0.33
LITAF-221ENST00000622633 CLK4Q9HAZ1 481 aaKnown RBP13.02□□□□□ -0.33
LITAF-221ENST00000622633 MLXIPLQ9NP71 852 aa13.02□□□□□ -0.33
LITAF-221ENST00000622633 PXMP2Q9NR77 195 aa13.02□□□□□ -0.33
LITAF-221ENST00000622633 TXLNGQ9NUQ3 528 aa13.02□□□□□ -0.33
LITAF-221ENST00000622633 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.02□□□□□ -0.334e-7■■■■□ 21.3
LITAF-221ENST00000622633 GABBR1Q9UBS5 961 aa13.02□□□□□ -0.33
LITAF-221ENST00000622633 PGAP2Q9UHJ9 254 aa13.02□□□□□ -0.33
LITAF-221ENST00000622633 BRWD3Q6RI45 1802 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 HNRNPDLO14979 420 aaKnown RBP13.01□□□□□ -0.33
LITAF-221ENST00000622633 ZNF862O60290 1169 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 SORBS3O60504 671 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 ITIH2P19823 946 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 EPHB2P29323 1055 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 SFNP31947 248 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 KRT76Q01546 638 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 SP4Q02446 784 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 GHRHRQ02643 423 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 ARHGEF6Q15052 776 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 B3GNT6Q6ZMB0 384 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 PATL1Q86TB9 770 aaKnown RBP13.01□□□□□ -0.33
LITAF-221ENST00000622633 NUP93Q8N1F7 819 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 GPD1LQ8N335 351 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 STARD8Q92502 1023 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 SLCO2A1Q92959 643 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 DGCR14Q96DF8 476 aaKnown RBP13.01□□□□□ -0.33
LITAF-221ENST00000622633 SNF8Q96H20 258 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 NTPCRQ9BSD7 190 aaKnown RBP13.01□□□□□ -0.33
LITAF-221ENST00000622633 DCLK3Q9C098 648 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 AASDHPPTQ9NRN7 309 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 TMEM120BA0PK00 339 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 RASA4BC9J798 803 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 VILLO15195 856 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 RASA4O43374 803 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 ADCY8P40145 1251 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 E2F2Q14209 437 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 SEPT7Q16181 437 aaKnown RBP13.01□□□□□ -0.33
LITAF-221ENST00000622633 FKBP1CQ5VVH2 108 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 FAM83AQ86UY5 434 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 ST13P4Q8IZP2 240 aaPredicted RBP13.01□□□□□ -0.33
LITAF-221ENST00000622633 ANKRD42Q8N9B4 389 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 NSMCE3Q96MG7 304 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 USP29Q9HBJ7 922 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 KCNK9Q9NPC2 374 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 ANAPC5Q9UJX4 755 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 RPL26L1Q9UNX3 145 aaKnown RBP13.01□□□□□ -0.33
LITAF-221ENST00000622633 TMA7Q9Y2S6 64 aaKnown RBP13.01□□□□□ -0.33
LITAF-221ENST00000622633 PCDHA10Q9Y5I2 948 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 LOXHD1Q8IVV2 1947 aa13.01□□□□□ -0.33
LITAF-221ENST00000622633 TCP11X1B4DZS4 312 aa13□□□□□ -0.33
LITAF-221ENST00000622633 STRNO43815 780 aa13□□□□□ -0.33
LITAF-221ENST00000622633 TTC4O95801 387 aa13□□□□□ -0.33
LITAF-221ENST00000622633 CFHP08603 1231 aa13□□□□□ -0.33
LITAF-221ENST00000622633 RALAP11233 206 aa13□□□□□ -0.33
LITAF-221ENST00000622633 ATF2P15336 505 aa13□□□□□ -0.33
LITAF-221ENST00000622633 GCNT1Q02742 428 aa13□□□□□ -0.33
LITAF-221ENST00000622633 SLC34A1Q06495 639 aa13□□□□□ -0.33
LITAF-221ENST00000622633 BAATQ14032 418 aaPredicted RBP13□□□□□ -0.33
LITAF-221ENST00000622633 GPR162Q16538 588 aa13□□□□□ -0.33
LITAF-221ENST00000622633 SPOPLQ6IQ16 392 aa13□□□□□ -0.33
LITAF-221ENST00000622633 NEK10Q6ZWH5 1172 aa13□□□□□ -0.33
LITAF-221ENST00000622633 NLRX1Q86UT6 975 aa13□□□□□ -0.33
LITAF-221ENST00000622633 CEP70Q8NHQ1 597 aa13□□□□□ -0.33
LITAF-221ENST00000622633 INPP5DQ92835 1189 aa13□□□□□ -0.33
LITAF-221ENST00000622633 SLC7A6OSQ96CW6 309 aaPredicted RBP13□□□□□ -0.33
LITAF-221ENST00000622633 C1orf112Q9NSG2 853 aa13□□□□□ -0.33
LITAF-221ENST00000622633 HBS1LQ9Y450 684 aaKnown RBP13□□□□□ -0.33
LITAF-221ENST00000622633 CBFA2T3O75081 653 aa13□□□□□ -0.33
LITAF-221ENST00000622633 TBX10O75333 385 aa13□□□□□ -0.33
LITAF-221ENST00000622633 WNT7BP56706 349 aa13□□□□□ -0.33
LITAF-221ENST00000622633 PTK6Q13882 451 aa13□□□□□ -0.33
LITAF-221ENST00000622633 SWSAP1Q6NVH7 229 aa13□□□□□ -0.33
LITAF-221ENST00000622633 VSTM1Q6UX27 236 aa13□□□□□ -0.33
LITAF-221ENST00000622633 MAMSTRQ6ZN01 415 aa13□□□□□ -0.33
LITAF-221ENST00000622633 TAS1R3Q7RTX0 852 aa13□□□□□ -0.33
LITAF-221ENST00000622633 USP37Q86T82 979 aa13□□□□□ -0.33
LITAF-221ENST00000622633 PRUNE1Q86TP1 453 aa13□□□□□ -0.33
LITAF-221ENST00000622633 PASD1Q8IV76 773 aa13□□□□□ -0.33
LITAF-221ENST00000622633 ESX1Q8N693 406 aa13□□□□□ -0.33
LITAF-221ENST00000622633 SERPINB12Q96P63 405 aa13□□□□□ -0.33
LITAF-221ENST00000622633 HAO1Q9UJM8 370 aa13□□□□□ -0.33
LITAF-221ENST00000622633 TTLL13PA6NNM8 815 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 SPECC1L-ADORA2AF8WAN1 911 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 THAP12O43422 761 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 RNASEH1O60930 286 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms