RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 SCN4BQ8IWT1 228 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 HDAC11Q96DB2 347 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 STAMBPL1Q96FJ0 436 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 ZNF560Q96MR9 790 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 KIF9Q9HAQ2 790 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 SLCO1B3Q9NPD5 702 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 SLC24A2Q9UI40 661 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 UMODL1Q5DID0 1318 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 LOC100653049A0A140TA62 436 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 PLA2G6O60733 806 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 KRT34O76011 436 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 ADRA1DP25100 572 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 NDST1P52848 882 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 POU5F1BQ06416 359 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 APPL2Q8NEU8 664 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 SLC26A7Q8TE54 656 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 EXT2Q93063 718 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 O00370 1275 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 SPAG6O75602 509 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 CREB1P16220 341 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 CKAP2Q8WWK9 683 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 COPS5Q92905 334 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 PPWD1Q96BP3 646 aaKnown RBP13.38□□□□□ -0.27
MSH6-215ENST00000622629 SLITRK1Q96PX8 696 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 PIH1D1Q9NWS0 290 aaKnown RBP13.38□□□□□ -0.27
MSH6-215ENST00000622629 TSPAN16Q9UKR8 245 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 DOT1LQ8TEK3 1739 aa13.37□□□□□ -0.27
MSH6-215ENST00000622629 LIASO43766 372 aa13.37□□□□□ -0.27
MSH6-215ENST00000622629 OAZ1P54368 228 aa13.37□□□□□ -0.27
MSH6-215ENST00000622629 TPD52P55327 224 aaPredicted RBP13.37□□□□□ -0.27
MSH6-215ENST00000622629 DBN1Q16643 649 aa13.37□□□□□ -0.27
MSH6-215ENST00000622629 RGS9BPQ6ZS82 235 aa13.37□□□□□ -0.27
MSH6-215ENST00000622629 RNF135Q8IUD6 432 aa13.37□□□□□ -0.27
MSH6-215ENST00000622629 USP33Q8TEY7 942 aa13.37□□□□□ -0.27
MSH6-215ENST00000622629 AFG1LQ8WV93 481 aa13.37□□□□□ -0.27
MSH6-215ENST00000622629 PRCCQ92733 491 aaPredicted RBP13.37□□□□□ -0.27
MSH6-215ENST00000622629 FAM193BQ96PV7 902 aaPredicted RBP13.37□□□□□ -0.27
MSH6-215ENST00000622629 CCDC68Q9H2F9 335 aa13.37□□□□□ -0.27
MSH6-215ENST00000622629 ACKR2O00590 384 aa13.37□□□□□ -0.27
MSH6-215ENST00000622629 CBX6O95503 412 aa13.37□□□□□ -0.27
MSH6-215ENST00000622629 TGFB3P10600 412 aa13.37□□□□□ -0.27
MSH6-215ENST00000622629 BGNP21810 368 aa13.37□□□□□ -0.27
MSH6-215ENST00000622629 RPA3P35244 121 aaPredicted RBP13.37□□□□□ -0.27
MSH6-215ENST00000622629 KYAT1Q16773 422 aa13.37□□□□□ -0.27
MSH6-215ENST00000622629 TTC39BQ5VTQ0 682 aaPredicted RBP13.37□□□□□ -0.27
MSH6-215ENST00000622629 ANKRD13AQ8IZ07 590 aa13.37□□□□□ -0.27
MSH6-215ENST00000622629 KBTBD13C9JR72 458 aa13.37□□□□□ -0.27
MSH6-215ENST00000622629 SMAPO00193 183 aa13.37□□□□□ -0.27
MSH6-215ENST00000622629 PPP1R12AO14974 1030 aaPredicted RBP13.37□□□□□ -0.27
MSH6-215ENST00000622629 CST3P01034 146 aaPredicted RBP13.37□□□□□ -0.27
MSH6-215ENST00000622629 CYP2C9P11712 490 aa13.37□□□□□ -0.27
MSH6-215ENST00000622629 EIF4BP23588 611 aaKnown RBP13.37□□□□□ -0.27
MSH6-215ENST00000622629 GNL1P36915 607 aaPredicted RBP13.37□□□□□ -0.27
MSH6-215ENST00000622629 TPI1P60174 286 aa13.37□□□□□ -0.27
MSH6-215ENST00000622629 KCNJ2P63252 427 aa13.37□□□□□ -0.27
MSH6-215ENST00000622629 CAPRIN2Q6IMN6 1127 aaKnown RBP13.37□□□□□ -0.27
MSH6-215ENST00000622629 SCUBE3Q8IX30 993 aa13.37□□□□□ -0.27
MSH6-215ENST00000622629 MTO1Q9Y2Z2 717 aaKnown RBP13.37□□□□□ -0.27
MSH6-215ENST00000622629 COL18A1P39060 1754 aa13.37□□□□□ -0.27
MSH6-215ENST00000622629 NWD2Q9ULI1 1742 aa13.37□□□□□ -0.27
MSH6-215ENST00000622629 ZMYM2Q9UBW7 1377 aa13.36□□□□□ -0.27
MSH6-215ENST00000622629 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.36□□□□□ -0.27
MSH6-215ENST00000622629 LACTBL1A8MY62 500 aa13.36□□□□□ -0.27
MSH6-215ENST00000622629 DEUP1Q05D60 604 aa13.36□□□□□ -0.27
MSH6-215ENST00000622629 LAMC2Q13753 1193 aa13.36□□□□□ -0.27
MSH6-215ENST00000622629 C15orf59Q2T9L4 293 aaPredicted RBP13.36□□□□□ -0.27
MSH6-215ENST00000622629 NSL1Q96IY1 281 aa13.36□□□□□ -0.27
MSH6-215ENST00000622629 CEP41Q9BYV8 373 aa13.36□□□□□ -0.27
MSH6-215ENST00000622629 GRHL1Q9NZI5 618 aa13.36□□□□□ -0.27
MSH6-215ENST00000622629 TMEM59LQ9UK28 342 aa13.36□□□□□ -0.27
MSH6-215ENST00000622629 AFG3L2Q9Y4W6 797 aa13.36□□□□□ -0.27
MSH6-215ENST00000622629 XIRP1Q702N8 1843 aaKnown RBP13.36□□□□□ -0.27
MSH6-215ENST00000622629 NEMP1O14524 444 aa13.36□□□□□ -0.27
MSH6-215ENST00000622629 GMNNO75496 209 aa13.36□□□□□ -0.27
MSH6-215ENST00000622629 ZNF286BP0CG31 522 aa13.36□□□□□ -0.27
MSH6-215ENST00000622629 MYL2P10916 166 aa13.36□□□□□ -0.27
MSH6-215ENST00000622629 RABGAP1LQ5R372 815 aa13.36□□□□□ -0.27
MSH6-215ENST00000622629 CATSPERGQ6ZRH7 1159 aa13.36□□□□□ -0.27
MSH6-215ENST00000622629 DENND5BQ6ZUT9 1274 aa13.36□□□□□ -0.27
MSH6-215ENST00000622629 LRRN4Q8WUT4 740 aa13.36□□□□□ -0.27
MSH6-215ENST00000622629 FSD1LQ9BXM9 530 aa13.36□□□□□ -0.27
MSH6-215ENST00000622629 MID2Q9UJV3 735 aa13.36□□□□□ -0.27
MSH6-215ENST00000622629 MYO5AQ9Y4I1 1855 aaKnown RBP13.36□□□□□ -0.27
MSH6-215ENST00000622629 SRRM3A6NNA2 597 aaPredicted RBP13.36□□□□□ -0.27
MSH6-215ENST00000622629 KPNA7A9QM74 516 aa13.36□□□□□ -0.27
MSH6-215ENST00000622629 PTGIRP43119 386 aa13.36□□□□□ -0.27
MSH6-215ENST00000622629 ELF3P78545 371 aaPredicted RBP13.36□□□□□ -0.27
MSH6-215ENST00000622629 NUF2Q9BZD4 464 aa13.36□□□□□ -0.27
MSH6-215ENST00000622629 OSBPL7Q9BZF2 842 aa13.36□□□□□ -0.27
MSH6-215ENST00000622629 NDE1Q9NXR1 346 aa13.36□□□□□ -0.27
MSH6-215ENST00000622629 MYH15Q9Y2K3 1946 aa13.36□□□□□ -0.27
MSH6-215ENST00000622629 IQCA1LA6NCM1 817 aa13.35□□□□□ -0.27
MSH6-215ENST00000622629 B4GALT5O43286 388 aa13.35□□□□□ -0.27
MSH6-215ENST00000622629 TRPA1O75762 1119 aa13.35□□□□□ -0.27
MSH6-215ENST00000622629 MICAL2O94851 1124 aa13.35□□□□□ -0.27
MSH6-215ENST00000622629 CTSHP09668 335 aa13.35□□□□□ -0.27
MSH6-215ENST00000622629 EEF1DP3Q658K8 133 aa13.35□□□□□ -0.27
MSH6-215ENST00000622629 JADE1Q6IE81 842 aa13.35□□□□□ -0.27
MSH6-215ENST00000622629 SUGP1Q8IWZ8 645 aaKnown RBP13.35□□□□□ -0.27
MSH6-215ENST00000622629 SLC7A14Q8TBB6 771 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms