RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 CNPY3Q9BT09 278 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 SYNCQ9H7C4 482 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 RSAD1Q9HA92 442 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 VTA1Q9NP79 307 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 PSMC3IPQ9P2W1 217 aaPredicted RBP9.89□□□□□ -0.83
PDPN-212ENST00000621990 RABGEF1Q9UJ41 708 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 A0A1B0GUA9 196 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 C2CD4BA6NLJ0 364 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 TYROBPO43914 113 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 MGRN1O60291 552 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 TSPAN1O60635 241 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 IFNB1P01574 187 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 CYP3A5P20815 502 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 ANKRD22Q5VYY1 191 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 RNF43Q68DV7 783 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 TRNP1Q6NT89 227 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 KCTD6Q8NC69 237 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 MAGEC3Q8TD91 643 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 AFG1LQ8WV93 481 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 PEBP4Q96S96 227 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 KATNBL1Q9H079 304 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 TRABDQ9H4I3 376 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 MLXIPLQ9NP71 852 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 ASNSD1Q9NWL6 643 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 CFAP73A6NFT4 308 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 RNF8O76064 485 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 PFKMP08237 780 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 HOXD8P13378 290 aaPredicted RBP9.88□□□□□ -0.83
PDPN-212ENST00000621990 PSMC4P43686 418 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 ARL4CP56559 192 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 GEMIN4P57678 1058 aaKnown RBP9.88□□□□□ -0.83
PDPN-212ENST00000621990 DYNLT1P63172 113 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 RBP5P82980 135 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 CCDC15Q0P6D6 951 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 BNIP1Q12981 228 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 PKN2Q16513 984 aaKnown RBP9.88□□□□□ -0.83
PDPN-212ENST00000621990 MSS51Q4VC12 460 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 FNBP1LQ5T0N5 605 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 ZNF467Q7Z7K2 595 aaPredicted RBP9.88□□□□□ -0.83
PDPN-212ENST00000621990 VSIG1Q86XK7 387 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 ATP11CQ8NB49 1132 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 ZC3H15Q8WU90 426 aaKnown RBP9.88□□□□□ -0.83
PDPN-212ENST00000621990 USP6NLQ92738 828 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 CPB2Q96IY4 423 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 MIS12Q9H081 205 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 ACSS3Q9H6R3 686 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 STARD13Q9Y3M8 1113 aa9.88□□□□□ -0.83
PDPN-212ENST00000621990 DPYSL4O14531 572 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 PHBP35232 272 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 RDXP35241 583 aaKnown RBP9.87□□□□□ -0.83
PDPN-212ENST00000621990 NDST1P52848 882 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 IGBP1P78318 339 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 GAD2Q05329 585 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 NOMO1Q15155 1222 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 STILQ15468 1287 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 TAF5Q15542 800 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 PKDCCQ504Y2 493 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 FAM102AQ5T9C2 384 aaPredicted RBP9.87□□□□□ -0.83
PDPN-212ENST00000621990 ADGRD1Q6QNK2 874 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 MTHFD1LQ6UB35 978 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 UNC45BQ8IWX7 931 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 PARP9Q8IXQ6 854 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 MZB1Q8WU39 189 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 RSAD2Q8WXG1 361 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 ADPGKQ9BRR6 497 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 VPS37BQ9H9H4 285 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 RXFP1Q9HBX9 757 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 GBA2Q9HCG7 927 aaPredicted RBP9.87□□□□□ -0.83
PDPN-212ENST00000621990 DPP3Q9NY33 737 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 AGAP1Q9UPQ3 857 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 DERAQ9Y315 318 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 CSDE1O75534 798 aaKnown RBP9.87□□□□□ -0.83
PDPN-212ENST00000621990 TMEM63AO94886 807 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 UBOX5O94941 541 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 GPD1P21695 349 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 STIP1P31948 543 aaKnown RBP9.87□□□□□ -0.83
PDPN-212ENST00000621990 GJA5P36382 358 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 GRM5P41594 1212 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 EIF3EP60228 445 aaKnown RBP9.87□□□□□ -0.83
PDPN-212ENST00000621990 SPARCL1Q14515 664 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 PDK4Q16654 411 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 FAM47CQ5HY64 1035 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 MARCH8Q5T0T0 291 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 LDLRAD1Q5T700 205 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 RFX6Q8HWS3 928 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 RTP4Q96DX8 246 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 HEXIM2Q96MH2 286 aaKnown RBP9.87□□□□□ -0.83
PDPN-212ENST00000621990 SMC6Q96SB8 1091 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 PCSK1NQ9UHG2 260 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 GRID1Q9ULK0 1009 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 AKT3Q9Y243 479 aa9.87□□□□□ -0.83
PDPN-212ENST00000621990 POC1B-GALNT4F8VUJ3 575 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 MCF2LO15068 1137 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 VTNP04004 478 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 ELF3P78545 371 aaPredicted RBP9.86□□□□□ -0.83
PDPN-212ENST00000621990 DPYSL3Q14195 570 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 KLHL38Q2WGJ6 581 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 HP1BP3Q5SSJ5 553 aaPredicted RBP9.86□□□□□ -0.83
PDPN-212ENST00000621990 FAM183BPQ6ZVS7 135 aa9.86□□□□□ -0.83
PDPN-212ENST00000621990 USP50Q70EL3 339 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms