RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 TRPM8Q7Z2W7 1104 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 NLGN2Q8NFZ4 835 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 TRPM4Q8TD43 1214 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 ATXN2LQ8WWM7 1075 aaKnown RBP8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 PGBD4Q96DM1 585 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 ZNF560Q96MR9 790 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 MRIQ9BWK5 157 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 KLC2Q9H0B6 622 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 DYRK4Q9NR20 520 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 NOCTQ9UK39 431 aaKnown RBP8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 HES2Q9Y543 173 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 PCDHA3Q9Y5H8 950 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 C10orf71Q711Q0 1435 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 SPAG7O75391 227 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 ICAM1P05362 532 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 ADORA2AP29274 412 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 RGS2P41220 211 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 ITGA8P53708 1063 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 TMPRSS15P98073 1019 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 DBN1Q16643 649 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 C1orf220Q5T0J3 134 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 CENPUQ71F23 418 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 RAB44Q7Z6P3 723 aaPredicted RBP8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 CHSY1Q86X52 802 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 PDZD8Q8NEN9 1154 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 PDCD2LQ9BRP1 358 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 MUC3BQ9H195 1237 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 GTSE1Q9NYZ3 720 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 FARP1Q9Y4F1 1045 aaPredicted RBP8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 FOCADQ5VW36 1801 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 AHCTF1Q8WYP5 2266 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 BRAFP15056 766 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 MUTP22033 750 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 RRM1P23921 792 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 VCPP55072 806 aaKnown RBP8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 TPI1P60174 286 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 PDIA2Q13087 525 aaKnown RBP8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 LAMC2Q13753 1193 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 VGLL4Q14135 290 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 SPDYCQ5MJ68 293 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 EXOC3L1Q86VI1 746 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 SYTL5Q8TDW5 730 aaPredicted RBP8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 ULK4Q96C45 1275 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 ZNF317Q96PQ6 595 aaPredicted RBP8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 APOL2Q9BQE5 337 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 KDM4CQ9H3R0 1056 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 LATS2Q9NRM7 1088 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 MAP3K20Q9NYL2 800 aaKnown RBP8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 UVRAGQ9P2Y5 699 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 TBX20Q9UMR3 447 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 KCNN4O15554 427 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 CALB1P05937 261 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 SULT1E1P49888 294 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 MYBPC2Q14324 1141 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 RFX8Q6ZV50 586 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 FRA10AC1Q70Z53 315 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 SV2AQ7L0J3 742 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 PRUNE1Q86TP1 453 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 MORC4Q8TE76 937 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 SHC3Q92529 594 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 ART4Q93070 314 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 CENPTQ96BT3 561 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 ADAM7Q9H2U9 754 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 RAB6BQ9NRW1 208 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 BFARQ9NZS9 450 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 CFAP69A5D8W1 941 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 RASA4BC9J798 803 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 MAGEB2O15479 319 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 RASA4O43374 803 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 PMPCBO75439 489 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 KRT10P13645 584 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 TBXAS1P24557 533 aaPredicted RBP8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 RAP1GAPP47736 663 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 NPTX2P47972 431 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 IL9RQ01113 521 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 LBRQ14739 615 aaKnown RBP8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 CNGA2Q16280 664 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 ACAD10Q6JQN1 1059 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 TRMT10CQ7L0Y3 403 aaKnown RBP8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 BBOF1Q8ND07 529 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 SNF8Q96H20 258 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 CYTH2Q99418 400 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 AGO4Q9HCK5 861 aaKnown RBP8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 TMEM8AQ9HCN3 771 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 CYP26B1Q9NR63 512 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 DDIT4Q9NX09 232 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 PCDHB7Q9Y5E2 793 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 ATAD5Q96QE3 1844 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 C17orf102A2RUQ5 167 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 CCDC85CA6NKD9 419 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 ATP9AO75110 1047 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 SUN1O94901 812 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 EPHB2P29323 1055 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 AKT1P31749 480 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 RFC1P35251 1148 aaPredicted RBP8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 HS6ST3Q8IZP7 471 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 KIF2BQ8N4N8 673 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 EMC1Q8N766 993 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 CHST13Q8NET6 341 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms