RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 DHX35Q9H5Z1 703 aaKnown RBP5.23□□□□□ -1.57
VPS13D-214ENST00000620676 E7ENX8 843 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 RTN2O75298 545 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 SEC24AO95486 1093 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 TDP2O95551 362 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 TAC1P20366 129 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 ARHGAP17Q68EM7 881 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 HELQQ8TDG4 1101 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 ZNF333Q96JL9 665 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 EHD3Q9NZN3 535 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 TUBGCP4Q9UGJ1 667 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 ABCB1P08183 1280 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-214ENST00000620676 VAC14Q08AM6 782 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 PON2Q15165 354 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 ZFP69Q49AA0 526 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 CDKAL1Q5VV42 579 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 OTOAQ7RTW8 1153 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 NET1Q7Z628 596 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-214ENST00000620676 IRF2BPLQ9H1B7 796 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 BLOC1S4Q9NUP1 217 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 AIPL1Q9NZN9 384 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 SETD1BQ9UPS6 1966 aaKnown RBP5.22□□□□□ -1.57
VPS13D-214ENST00000620676 TRAPPC8Q9Y2L5 1435 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 FAM155BO75949 473 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 SNRPAP09012 282 aaKnown RBP5.22□□□□□ -1.57
VPS13D-214ENST00000620676 SPATA31D3P0C874 917 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 SCNN1DP51172 638 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 PTPN12Q05209 780 aaKnown RBP5.22□□□□□ -1.57
VPS13D-214ENST00000620676 NFIL3Q16649 462 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 CRTC3Q6UUV7 619 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 SPATA31D4Q6ZUB0 917 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 SLC4A9Q96Q91 983 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 C7orf25Q9BPX7 421 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 UBXN6Q9BZV1 441 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 SAE1Q9UBE0 346 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-214ENST00000620676 CAMTA2O94983 1202 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 ANGPT1Q15389 498 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 FAM213AQ9BRX8 229 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 HERC2P3Q9BVR0 1158 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 TMLHEQ9NVH6 421 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 WDR7Q9Y4E6 1490 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 CCNKO75909 580 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 ALBP02768 609 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 FBXO36Q8NEA4 188 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 DHRS1Q96LJ7 313 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 PAFAH2Q99487 392 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 TIMMDC1Q9NPL8 285 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 KIAA0232Q92628 1395 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 SYCP2Q9BX26 1530 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 A6NL46 340 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 INPP4BO15327 924 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 ATP9BO43861 1147 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 MT-ND1P03886 318 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 TEDDM1Q5T9Z0 273 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 RNF43Q68DV7 783 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 SLC47A2Q86VL8 602 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 ADAM32Q8TC27 787 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 SARS2Q9NP81 518 aaKnown RBP5.22□□□□□ -1.57
VPS13D-214ENST00000620676 ZSCAN5BA6NJL1 495 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 DCXO43602 365 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 EPN2O95208 641 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 NR1H2P55055 460 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 PAGE2BQ5JRK9 111 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 SEL1L3Q68CR1 1132 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 RCOR2Q8IZ40 523 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 MRPL9Q9BYD2 267 aaKnown RBP5.22□□□□□ -1.57
VPS13D-214ENST00000620676 MAGEF1Q9HAY2 307 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 KMT5AQ9NQR1 393 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 CASP4P49662 377 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 MYBPC3Q14896 1274 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 GALNTL6Q49A17 601 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 IGDCC4Q8TDY8 1250 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 ZSCAN5AQ9BUG6 496 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 ZFYVE28Q9HCC9 887 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 PRKACBP22694 351 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 ZNF267Q14586 743 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-214ENST00000620676 ABCB5Q2M3G0 1257 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 SPDYE2Q495Y8 402 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 RNASE12Q5GAN4 147 aaKnown RBP5.22□□□□□ -1.57
VPS13D-214ENST00000620676 FAAH2Q6GMR7 532 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 BTN2A1Q7KYR7 527 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 MSL3Q8N5Y2 521 aaKnown RBP5.22□□□□□ -1.57
VPS13D-214ENST00000620676 RUBCNLQ9H714 662 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 ZNF862O60290 1169 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 IL1R1P14778 569 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 YARSP54577 528 aaKnown RBP5.22□□□□□ -1.57
VPS13D-214ENST00000620676 DEPTORQ8TB45 409 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 ABCA10Q8WWZ4 1543 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 SLC5A5Q92911 643 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 OCEL1Q9H607 264 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 NGRNQ9NPE2 291 aaKnown RBP5.22□□□□□ -1.57
VPS13D-214ENST00000620676 STK36Q9NRP7 1315 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 RAB6BQ9NRW1 208 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 KDM3AQ9Y4C1 1321 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 FOXN2P32314 431 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 TMEM26Q6ZUK4 368 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 MAF1Q9H063 256 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 SRP72O76094 671 aaKnown RBP5.22□□□□□ -1.57
VPS13D-214ENST00000620676 CCDC166P0CW27 439 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 SLC1A6P48664 564 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms