RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 CHST7Q9NS84 486 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 DLGAP2Q9P1A6 1054 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 SLC24A2Q9UI40 661 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 NALCNQ8IZF0 1738 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 SPDYE5A6NIY4 337 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 ZNF263O14978 683 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 ALDH1A1P00352 501 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 ARL4DP49703 201 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 ATXN3P54252 364 aaPredicted RBP8.67□□□□□ -1.02
ALMS1-208ENST00000620466 ELF3P78545 371 aaPredicted RBP8.67□□□□□ -1.02
ALMS1-208ENST00000620466 MRPS35P82673 323 aaKnown RBP8.67□□□□□ -1.02
ALMS1-208ENST00000620466 MAPRE2Q15555 327 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 NBPF20Q3BBV1 942 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 SPDYE7PQ495Y7 208 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 KIRREL3Q8IZU9 778 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 CENPTQ96BT3 561 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 KATNAL1Q9BW62 490 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 FGFBP2Q9BYJ0 223 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 MYLK2Q9H1R3 596 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 C20orf96Q9NUD7 363 aaPredicted RBP8.67□□□□□ -1.02
ALMS1-208ENST00000620466 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.67□□□□□ -1.02
ALMS1-208ENST00000620466 IQCA1LA6NCM1 817 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 DNALI1O14645 258 aaPredicted RBP8.67□□□□□ -1.02
ALMS1-208ENST00000620466 TNPO2O14787 897 aaKnown RBP8.67□□□□□ -1.02
ALMS1-208ENST00000620466 ZNF189O75820 626 aaPredicted RBP8.67□□□□□ -1.02
ALMS1-208ENST00000620466 CALCAP01258 141 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 MAP4P27816 1152 aaKnown RBP8.67□□□□□ -1.02
ALMS1-208ENST00000620466 MCL1Q07820 350 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 CNGA3Q16281 694 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 C4orf22Q6V702 233 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 IRF2BP2Q7Z5L9 587 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 CCDC33Q8N5R6 958 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 ZNF513Q8N8E2 541 aaPredicted RBP8.67□□□□□ -1.02
ALMS1-208ENST00000620466 CHST13Q8NET6 341 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 OTULINQ96BN8 352 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 ABHD8Q96I13 439 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 MED15Q96RN5 788 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 TRIM54Q9BYV2 358 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 TCHHQ07283 1943 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 MEIS2O14770 477 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 AIM2O14862 343 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 RGL2O15211 777 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 UPP2O95045 317 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 POLBP06746 335 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 HMBSP08397 361 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 ENO3P13929 434 aaPredicted RBP8.67□□□□□ -1.02
ALMS1-208ENST00000620466 STIP1P31948 543 aaKnown RBP8.67□□□□□ -1.02
ALMS1-208ENST00000620466 CRYMQ14894 314 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 SNX17Q15036 470 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 WDR49Q8IV35 697 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 TAGAPQ8N103 731 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 TBC1D19Q8N5T2 526 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 TFB1MQ8WVM0 346 aaKnown RBP8.67□□□□□ -1.02
ALMS1-208ENST00000620466 CMTM5Q96DZ9 223 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 KCNQ5Q9NR82 932 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 GPATCH2LQ9NWQ4 482 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 CDYLQ9Y232 598 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 TM9SF1O15321 606 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 MAP3K6O95382 1288 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 LCA5LO95447 670 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 NLRP11P59045 1033 aaKnown RBP8.67□□□□□ -1.02
ALMS1-208ENST00000620466 DSG1Q02413 1049 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 PPP3CAQ08209 521 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 TMEM62Q0P6H9 643 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 USP10Q14694 798 aaKnown RBP8.67□□□□□ -1.02
ALMS1-208ENST00000620466 YTHDF3Q7Z739 585 aaKnown RBP8.67□□□□□ -1.02
ALMS1-208ENST00000620466 PGBD3Q8N328 593 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 HES6Q96HZ4 224 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 ZNF518BQ9C0D4 1074 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 MUC3BQ9H195 1237 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 LRRC4BQ9NT99 713 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 CHCHD3Q9NX63 227 aaKnown RBP8.67□□□□□ -1.02
ALMS1-208ENST00000620466 SELENONQ9NZV5 590 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 DOLKQ9UPQ8 538 aa8.67□□□□□ -1.02
ALMS1-208ENST00000620466 LSM8O95777 96 aaKnown RBP8.66□□□□□ -1.02
ALMS1-208ENST00000620466 CYP1A2P05177 515 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 DDX5P17844 614 aaKnown RBP8.66□□□□□ -1.02
ALMS1-208ENST00000620466 ZNF157P51786 506 aaPredicted RBP8.66□□□□□ -1.02
ALMS1-208ENST00000620466 MYL6P60660 151 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 AARS2Q5JTZ9 985 aaKnown RBP8.66□□□□□ -1.02
ALMS1-208ENST00000620466 ANGEL2Q5VTE6 544 aaKnown RBP8.66□□□□□ -1.02
ALMS1-208ENST00000620466 TMEM237Q96Q45 408 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 ASPSCR1Q9BZE9 553 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 DPP3Q9NY33 737 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 HACL1Q9UJ83 578 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 PCDHB7Q9Y5E2 793 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 SPATA31A6Q5VVP1 1343 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 KDM3BQ7LBC6 1761 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 OGTO15294 1046 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 DGKIO75912 1065 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 HLA-DPA1P20036 260 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 ST8SIA6P61647 398 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 C1QBPQ07021 282 aaKnown RBP8.66□□□□□ -1.02
ALMS1-208ENST00000620466 KRT72Q14CN4 511 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 SCFD2Q8WU76 684 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 KAT5Q92993 513 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 ZKSCAN4Q969J2 545 aaPredicted RBP8.66□□□□□ -1.02
ALMS1-208ENST00000620466 CDV3Q9UKY7 258 aaKnown RBP8.66□□□□□ -1.02
ALMS1-208ENST00000620466 GJB6O95452 261 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 PTPN4P29074 926 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms