RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 WDR49Q8IV35 697 aa4.54□□□□□ -1.68
SEC22B-202ENST00000618538 SULF1Q8IWU6 871 aa4.54□□□□□ -1.68
SEC22B-202ENST00000618538 UNC45BQ8IWX7 931 aa4.54□□□□□ -1.68
SEC22B-202ENST00000618538 RCOR2Q8IZ40 523 aa4.54□□□□□ -1.68
SEC22B-202ENST00000618538 NIPA2Q8N8Q9 360 aa4.54□□□□□ -1.68
SEC22B-202ENST00000618538 ACTL9Q8TC94 416 aa4.54□□□□□ -1.68
SEC22B-202ENST00000618538 TRAPPC12Q8WVT3 735 aa4.54□□□□□ -1.68
SEC22B-202ENST00000618538 C10orf82Q8WW14 230 aa4.54□□□□□ -1.68
SEC22B-202ENST00000618538 PTPRN2Q92932 1015 aa4.54□□□□□ -1.68
SEC22B-202ENST00000618538 SLC7A6OSQ96CW6 309 aaPredicted RBP4.54□□□□□ -1.68
SEC22B-202ENST00000618538 KLRG1Q96E93 195 aa4.54□□□□□ -1.68
SEC22B-202ENST00000618538 PRR11Q96HE9 360 aaPredicted RBP4.54□□□□□ -1.68
SEC22B-202ENST00000618538 ZNF570Q96NI8 536 aa4.54□□□□□ -1.68
SEC22B-202ENST00000618538 TMEM237Q96Q45 408 aa4.54□□□□□ -1.68
SEC22B-202ENST00000618538 CPXM1Q96SM3 734 aa4.54□□□□□ -1.68
SEC22B-202ENST00000618538 KLF6Q99612 283 aaPredicted RBP4.54□□□□□ -1.68
SEC22B-202ENST00000618538 ACO2Q99798 780 aaKnown RBP4.54□□□□□ -1.68
SEC22B-202ENST00000618538 DHRS4Q9BTZ2 278 aa4.54□□□□□ -1.68
SEC22B-202ENST00000618538 NIF3L1Q9GZT8 377 aa4.54□□□□□ -1.68
SEC22B-202ENST00000618538 ASCC2Q9H1I8 757 aaPredicted RBP4.54□□□□□ -1.68
SEC22B-202ENST00000618538 TRABDQ9H4I3 376 aa4.54□□□□□ -1.68
SEC22B-202ENST00000618538 MINDY3Q9H8M7 445 aa4.54□□□□□ -1.68
SEC22B-202ENST00000618538 PCDH9Q9HC56 1237 aa4.54□□□□□ -1.68
SEC22B-202ENST00000618538 MRPL47Q9HD33 250 aaKnown RBP4.54□□□□□ -1.68
SEC22B-202ENST00000618538 PTPRHQ9HD43 1115 aa4.54□□□□□ -1.68
SEC22B-202ENST00000618538 RGS17Q9UGC6 210 aaPredicted RBP4.54□□□□□ -1.68
SEC22B-202ENST00000618538 SIX4Q9UIU6 781 aa4.54□□□□□ -1.68
SEC22B-202ENST00000618538 CPSF3Q9UKF6 684 aaKnown RBP4.54□□□□□ -1.68
SEC22B-202ENST00000618538 ZMYND8Q9ULU4 1186 aaPredicted RBP4.54□□□□□ -1.68
SEC22B-202ENST00000618538 CTDP1Q9Y5B0 961 aaPredicted RBP4.54□□□□□ -1.68
SEC22B-202ENST00000618538 CFAP73A6NFT4 308 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 EDF1O60869 148 aaKnown RBP4.53□□□□□ -1.68
SEC22B-202ENST00000618538 ADAM23O75077 832 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 MAFO75444 373 aaPredicted RBP4.53□□□□□ -1.68
SEC22B-202ENST00000618538 UNC5CO95185 931 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 LSM8O95777 96 aaKnown RBP4.53□□□□□ -1.68
SEC22B-202ENST00000618538 ITGAVP06756 1048 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 CYP3A5P20815 502 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 PROZP22891 400 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 ADRA1DP25100 572 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 HMGB2P26583 209 aaKnown RBP4.53□□□□□ -1.68
SEC22B-202ENST00000618538 MARK3P27448 753 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 RPL22P35268 128 aaKnown RBP4.53□□□□□ -1.68
SEC22B-202ENST00000618538 TCF7P36402 384 aaPredicted RBP4.53□□□□□ -1.68
SEC22B-202ENST00000618538 CTCFP49711 727 aaPredicted RBP4.53□□□□□ -1.68
SEC22B-202ENST00000618538 VEGFBP49765 207 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 RAD23BP54727 409 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 CDH8P55286 799 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 OSTNP61366 133 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 MCL1Q07820 350 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 MYO1EQ12965 1108 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 ACVR2BQ13705 512 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 PRKG1Q13976 671 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 MORF4L2Q15014 288 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 PDK4Q16654 411 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 LY6KQ17RY6 165 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 HSDL1Q3SXM5 330 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 SYCP2LQ5T4T6 812 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 ANGEL2Q5VTE6 544 aaKnown RBP4.53□□□□□ -1.68
SEC22B-202ENST00000618538 CES4AQ5XG92 561 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 NPNTQ6UXI9 565 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 RGS9BPQ6ZS82 235 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 EEPD1Q7L9B9 569 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 OTOAQ7RTW8 1153 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 CCDC91Q7Z6B0 441 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 DHX37Q8IY37 1157 aaKnown RBP4.53□□□□□ -1.68
SEC22B-202ENST00000618538 GPATCH11Q8N954 259 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 NAT8LQ8N9F0 302 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 PXYLP1Q8TE99 480 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 LRRN4Q8WUT4 740 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 DCAKDQ8WVC6 231 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 SLC7A3Q8WY07 619 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 KLHL29Q96CT2 875 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 ERP27Q96DN0 273 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 RBM41Q96IZ5 413 aaKnown RBP4.53□□□□□ -1.68
SEC22B-202ENST00000618538 IMPG2Q9BZV3 1241 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 VPS33BQ9H267 617 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 CXorf56Q9H5V9 222 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 SMYD3Q9H7B4 428 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 ZWILCHQ9H900 591 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 GINM1Q9NU53 330 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 GEMIN8Q9NWZ8 242 aaKnown RBP4.53□□□□□ -1.68
SEC22B-202ENST00000618538 SLC17A7Q9P2U7 560 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 NKX1-2Q9UD57 310 aaPredicted RBP4.53□□□□□ -1.68
SEC22B-202ENST00000618538 PHTF1Q9UMS5 762 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 PCDHGC3Q9UN70 934 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 SHOC2Q9UQ13 582 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 DRG1Q9Y295 367 aaKnown RBP4.53□□□□□ -1.68
SEC22B-202ENST00000618538 SLC27A5Q9Y2P5 690 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 SNCAIPQ9Y6H5 919 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 MCM3APO60318 1980 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 IGKV6-21A0A0C4DH24 114 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 E5RJQ4 531 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 E7ESA3 106 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 H0YCG3 227 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 GOLGA8RI6L899 631 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 SGK1O00141 431 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 CST8O60676 142 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 DKC1O60832 514 aaKnown RBP eCLIP4.53□□□□□ -1.68
SEC22B-202ENST00000618538 CSDE1O75534 798 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms