RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 DENND1BQ6P3S1 775 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 SLC39A4Q6P5W5 647 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 ARMC2Q8NEN0 867 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 TCP10LQ8TDR4 215 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 FBXO41Q8TF61 875 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 CPXM1Q96SM3 734 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 RPS6KL1Q9Y6S9 549 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 SIGLEC16A6NMB1 481 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 B2RBV5 119 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 TXNDC9O14530 226 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 LIASO43766 372 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 ETS1P14921 441 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 ELF1P32519 619 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 BMPR2Q13873 1038 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 RIOX2Q8IUF8 465 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 SCUBE3Q8IX30 993 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 TRPM4Q8TD43 1214 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 BARX2Q9UMQ3 279 aaPredicted RBP5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 APOBEC2Q9Y235 224 aaKnown RBP5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 FOXO6A8MYZ6 492 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 APOL1O14791 398 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 FARP2O94887 1054 aaPredicted RBP5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 NPTXRO95502 500 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 C4BPAP04003 597 aaKnown RBP5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 CYP1A1P04798 512 aaPredicted RBP5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 SETSIPP0DME0 302 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 KDELR1P24390 212 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 ECHS1P30084 290 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 ZNF484Q5JVG2 852 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 MOB2Q70IA6 237 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 GLIS1Q8NBF1 620 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 CCT6BQ92526 530 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 STAMBPL1Q96FJ0 436 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 OSMRQ99650 979 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 SPON1Q9HCB6 807 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 HEY2Q9UBP5 337 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 CPSF3Q9UKF6 684 aaKnown RBP5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 EFR3BQ9Y2G0 817 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 HES2Q9Y543 173 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 RPTORQ8N122 1335 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 SCN11AQ9UI33 1791 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 hCG_1818297A0A087WSY0 165 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 KBTBD13C9JR72 458 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 NFICP08651 508 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 C6orf222P0C671 652 aaPredicted RBP5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 ZFXP17010 805 aaPredicted RBP5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 RAD23BP54727 409 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 ITIH4Q14624 930 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 CYP1B1Q16678 543 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 C15orf59Q2T9L4 293 aaPredicted RBP5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 ARL13BQ3SXY8 428 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 RASIP1Q5U651 963 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 RSPH3Q86UC2 560 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 MCUQ8NE86 351 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 FNIP1Q8TF40 1166 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 ZNF669Q96BR6 464 aaPredicted RBP5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 STRA6Q9BX79 667 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 CCDC78A2IDD5 438 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 VTNP04004 478 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 MCF2P10911 925 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 GHRP10912 638 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 ARF4P18085 180 aaPredicted RBP5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 EPHB2P29323 1055 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 GARSP41250 739 aaKnown RBP5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 CPA2P48052 419 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 PTP4A2Q12974 167 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 STX3Q13277 289 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 AMHR2Q16671 573 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 CCDC33Q8N5R6 958 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 CCNYL1Q8N7R7 359 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 C1orf127Q8N9H9 656 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 C12orf50Q8NA57 414 aaPredicted RBP5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 DTX3LQ8TDB6 740 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 ZNF516Q92618 1163 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 E2F7Q96AV8 911 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 CLMNQ96JQ2 1002 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 FAM161BQ96MY7 647 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 LRRC4CQ9HCJ2 640 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 HAO1Q9UJM8 370 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 PHRF1Q9P1Y6 1649 aaKnown RBP5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 CCL15-CCL14A0A0B4J2E2 113 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 KCNJ2P63252 427 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 CCL15Q16663 113 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 KYAT1Q16773 422 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 MAP7D1Q3KQU3 841 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 FBXO47Q5MNV8 452 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 RAPH1Q70E73 1250 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 SYT11Q9BT88 431 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 KDM4CQ9H3R0 1056 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 KLK14Q9P0G3 267 aa5.87□□□□□ -1.47
SYNCRIP-204ENST00000616122 CABIN1Q9Y6J0 2220 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 EIF4E1BA6NMX2 242 aaKnown RBP5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 ATP9BO43861 1147 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 CBX6O95503 412 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 NQO1P15559 274 aaKnown RBP5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 CCND1P24385 295 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 RBL1P28749 1068 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 RAP1GAPP47736 663 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 WDR4P57081 412 aaKnown RBP5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 SNAPC2Q13487 334 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms