RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 GRK4P32298 578 aa9.24□□□□□ -0.93
VPS11-206ENST00000614944 PEX5P50542 639 aa9.24□□□□□ -0.93
VPS11-206ENST00000614944 FXR1P51114 621 aaKnown RBP eCLIP9.24□□□□□ -0.93
VPS11-206ENST00000614944 CYP2J2P51589 502 aa9.24□□□□□ -0.93
VPS11-206ENST00000614944 CLCN3P51790 818 aa9.24□□□□□ -0.93
VPS11-206ENST00000614944 HPCAP84074 193 aa9.24□□□□□ -0.93
VPS11-206ENST00000614944 ATF7IP2Q5U623 682 aa9.24□□□□□ -0.93
VPS11-206ENST00000614944 KRT39Q6A163 491 aa9.24□□□□□ -0.93
VPS11-206ENST00000614944 TWF2Q6IBS0 349 aaKnown RBP9.24□□□□□ -0.93
VPS11-206ENST00000614944 TMEM214Q6NUQ4 689 aaKnown RBP9.24□□□□□ -0.93
VPS11-206ENST00000614944 KSR1Q8IVT5 923 aa9.24□□□□□ -0.93
VPS11-206ENST00000614944 LRRC71Q8N4P6 559 aa9.24□□□□□ -0.93
VPS11-206ENST00000614944 C7orf31Q8N865 590 aa9.24□□□□□ -0.93
VPS11-206ENST00000614944 UROC1Q96N76 676 aa9.24□□□□□ -0.93
VPS11-206ENST00000614944 CEP44Q9C0F1 390 aa9.24□□□□□ -0.93
VPS11-206ENST00000614944 HAPLN2Q9GZV7 340 aa9.24□□□□□ -0.93
VPS11-206ENST00000614944 HMX1Q9NP08 348 aaPredicted RBP9.24□□□□□ -0.93
VPS11-206ENST00000614944 CHST12Q9NRB3 414 aa9.24□□□□□ -0.93
VPS11-206ENST00000614944 RBAK-RBAKDNI3L0D1 243 aa9.24□□□□□ -0.93
VPS11-206ENST00000614944 CLDN3O15551 220 aa9.24□□□□□ -0.93
VPS11-206ENST00000614944 KCNJ13O60928 360 aa9.24□□□□□ -0.93
VPS11-206ENST00000614944 CASP14P31944 242 aa9.24□□□□□ -0.93
VPS11-206ENST00000614944 TMED10P49755 219 aaKnown RBP9.24□□□□□ -0.93
VPS11-206ENST00000614944 MYL7Q01449 175 aa9.24□□□□□ -0.93
VPS11-206ENST00000614944 LMBRD2Q68DH5 695 aaPredicted RBP9.24□□□□□ -0.93
VPS11-206ENST00000614944 CACNA2D3Q8IZS8 1091 aa9.24□□□□□ -0.93
VPS11-206ENST00000614944 PAF1Q8N7H5 531 aa9.24□□□□□ -0.93
VPS11-206ENST00000614944 USP38Q8NB14 1042 aa9.24□□□□□ -0.93
VPS11-206ENST00000614944 ARRDC4Q8NCT1 418 aa9.24□□□□□ -0.93
VPS11-206ENST00000614944 CCDC127Q96BQ5 260 aa9.24□□□□□ -0.93
VPS11-206ENST00000614944 HAPLN3Q96S86 360 aa9.24□□□□□ -0.93
VPS11-206ENST00000614944 ASB7Q9H672 318 aa9.24□□□□□ -0.93
VPS11-206ENST00000614944 HSFX1Q9UBD0 423 aa9.24□□□□□ -0.93
VPS11-206ENST00000614944 INTUQ9ULD6 942 aa9.24□□□□□ -0.93
VPS11-206ENST00000614944 INHAP05111 366 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 EDN1P05305 212 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 CYP2C9P11712 490 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 POLR2EP19388 210 aaKnown RBP9.23□□□□□ -0.93
VPS11-206ENST00000614944 GRM5P41594 1212 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 GUCY1A3Q02108 690 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 PKN2Q16513 984 aaKnown RBP9.23□□□□□ -0.93
VPS11-206ENST00000614944 CNPY1Q3B7I2 92 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 HSP90AA4PQ58FG1 418 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 DEPDC1Q5TB30 811 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 KDM7AQ6ZMT4 941 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 VPS52Q8N1B4 723 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 PLEKHO2Q8TD55 490 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 TRAPPC12Q8WVT3 735 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 IRGQQ8WZA9 623 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 KRT82Q9NSB4 513 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 SETD4Q9NVD3 440 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 UTRNP46939 3433 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 MYADML2A6NDP7 307 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 C4BPAP04003 597 aaKnown RBP9.23□□□□□ -0.93
VPS11-206ENST00000614944 CCNFP41002 786 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 PCSK7Q16549 785 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 ZACNQ401N2 412 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 XKR4Q5GH76 650 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 GNASQ5JWF2 1037 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 C1orf53Q5VUE5 145 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 TAOK1Q7L7X3 1001 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 TBC1D1Q86TI0 1168 aaPredicted RBP9.23□□□□□ -0.93
VPS11-206ENST00000614944 VPS36Q86VN1 386 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 TMEM151BQ8IW70 566 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 PSKH2Q96QS6 385 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 MSTO1Q9BUK6 570 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 TARS2Q9BW92 718 aaKnown RBP9.23□□□□□ -0.93
VPS11-206ENST00000614944 STK33Q9BYT3 514 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 NSRP1Q9H0G5 558 aaKnown RBP9.23□□□□□ -0.93
VPS11-206ENST00000614944 PDZD7Q9H5P4 517 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 VRTNQ9H8Y1 702 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 POLD4Q9HCU8 107 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 AGPAT5Q9NUQ2 364 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 NDFIP2Q9NV92 336 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 ETNK2Q9NVF9 386 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.23□□□□□ -0.93
VPS11-206ENST00000614944 SCHIP1Q9P0W5 487 aaPredicted RBP9.23□□□□□ -0.93
VPS11-206ENST00000614944 TRPV2Q9Y5S1 764 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 NOX1Q9Y5S8 564 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 A0A087WZ62 844 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 GSTA1P08263 222 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 C6orf222P0C671 652 aaPredicted RBP9.23□□□□□ -0.93
VPS11-206ENST00000614944 PIK3CAP42336 1068 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 HIC1Q14526 733 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 TRIM71Q2Q1W2 868 aaKnown RBP9.23□□□□□ -0.93
VPS11-206ENST00000614944 ANKDD1AQ495B1 522 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 PHLDB3Q6NSJ2 640 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 IRGCQ6NXR0 463 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 CBWD2Q8IUF1 395 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 SGCDQ92629 289 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 VPS50Q96JG6 964 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 GDAP1L1Q96MZ0 367 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 FDXACB1Q9BRP7 624 aaPredicted RBP9.23□□□□□ -0.93
VPS11-206ENST00000614944 SELENOOQ9BVL4 669 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 TMEM117Q9H0C3 514 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 PDP2Q9P2J9 529 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 CTNNAL1Q9UBT7 734 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 TBK1Q9UHD2 729 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 OGDHLQ9ULD0 1010 aa9.23□□□□□ -0.93
VPS11-206ENST00000614944 AKT3Q9Y243 479 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms