RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 UNGP13051 313 aaPredicted RBP15.53■□□□□ 0.08
CD48-203ENST00000613788 EPCAMP16422 314 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 PLA2G4AP47712 749 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 KIF11P52732 1056 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 CACNA2D1P54289 1103 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 NOMO3P69849 1222 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 SLC18A3Q16572 532 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 DDR2Q16832 855 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 ASTE1Q2TB18 679 aaPredicted RBP15.53■□□□□ 0.08
CD48-203ENST00000613788 TCEAL5Q5H9L2 206 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 C1orf131Q8NDD1 294 aaKnown RBP15.53■□□□□ 0.08
CD48-203ENST00000613788 ZMIZ2Q8NF64 920 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 SPATA17Q96L03 361 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 HSFY1Q96LI6 401 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 IGFLR1Q9H665 355 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 CYLDQ9NQC7 956 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 INSL5Q9Y5Q6 135 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 HCFC2Q9Y5Z7 792 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 A0A087X0T9 212 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 NCK2O43639 380 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 LRG1P02750 347 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 C8AP07357 584 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 FAM228BP0C875 321 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 SRGAP2BP0DMP2 458 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 ACADSBP45954 432 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 NSFP46459 744 aaKnown RBP15.52■□□□□ 0.07
CD48-203ENST00000613788 CENPCQ03188 943 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 ADGRE1Q14246 886 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 VEPH1Q14D04 833 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 PPM1LQ5SGD2 360 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 NAA35Q5VZE5 725 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 ACAD10Q6JQN1 1059 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 PMF1Q6P1K2 205 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 PIGZQ86VD9 579 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 ERICH1Q86X53 443 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 TMEM139Q8IV31 216 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 SLC7A14Q8TBB6 771 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 CPA5Q8WXQ8 436 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 KCTD13Q8WZ19 329 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 PPP1R13BQ96KQ4 1090 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 MIS12Q9H081 205 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 LRRC4Q9HBW1 653 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 MAN1C1Q9NR34 630 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 ST7Q9NRC1 585 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 TMEM30AQ9NV96 361 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 EHD2Q9NZN4 543 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 NAGPAQ9UK23 515 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 YIPF1Q9Y548 306 aa15.52■□□□□ 0.07
CD48-203ENST00000613788 EPN1Q9Y6I3 576 aaPredicted RBP15.52■□□□□ 0.07
CD48-203ENST00000613788 COL4A4P53420 1690 aaPredicted RBP15.51■□□□□ 0.07
CD48-203ENST00000613788 SOWAHDA6NJG2 315 aa15.51■□□□□ 0.07
CD48-203ENST00000613788 SPDYE4A6NLX3 237 aa15.51■□□□□ 0.07
CD48-203ENST00000613788 RTN2O75298 545 aa15.51■□□□□ 0.07
CD48-203ENST00000613788 ZMYND10O75800 440 aa15.51■□□□□ 0.07
CD48-203ENST00000613788 SOAT2O75908 522 aa15.51■□□□□ 0.07
CD48-203ENST00000613788 IPO7O95373 1038 aaKnown RBP15.51■□□□□ 0.07
CD48-203ENST00000613788 EPHB3P54753 998 aa15.51■□□□□ 0.07
CD48-203ENST00000613788 HYAL1Q12794 435 aa15.51■□□□□ 0.07
CD48-203ENST00000613788 PDCLQ13371 301 aa15.51■□□□□ 0.07
CD48-203ENST00000613788 TAF12Q16514 161 aa15.51■□□□□ 0.07
CD48-203ENST00000613788 CCDC122Q5T0U0 273 aa15.51■□□□□ 0.07
CD48-203ENST00000613788 LLGL2Q6P1M3 1020 aa15.51■□□□□ 0.07
CD48-203ENST00000613788 ALKBH5Q6P6C2 394 aaKnown RBP15.51■□□□□ 0.07
CD48-203ENST00000613788 NUP93Q8N1F7 819 aa15.51■□□□□ 0.07
CD48-203ENST00000613788 ELMOD1Q8N336 334 aa15.51■□□□□ 0.07
CD48-203ENST00000613788 EFHBQ8N7U6 833 aa15.51■□□□□ 0.07
CD48-203ENST00000613788 OLIG1Q8TAK6 271 aa15.51■□□□□ 0.07
CD48-203ENST00000613788 IPO4Q8TEX9 1081 aaKnown RBP15.51■□□□□ 0.07
CD48-203ENST00000613788 CASP10Q92851 521 aa15.51■□□□□ 0.07
CD48-203ENST00000613788 SLC4A5Q9BY07 1137 aa15.51■□□□□ 0.07
CD48-203ENST00000613788 SYNCQ9H7C4 482 aa15.51■□□□□ 0.07
CD48-203ENST00000613788 COMMD8Q9NX08 183 aa15.51■□□□□ 0.07
CD48-203ENST00000613788 ASB3Q9Y575 518 aa15.51■□□□□ 0.07
CD48-203ENST00000613788 HHLA1C9JL84 531 aa15.5■□□□□ 0.07
CD48-203ENST00000613788 TULP2O00295 520 aa15.5■□□□□ 0.07
CD48-203ENST00000613788 ARHGAP6O43182 974 aa15.5■□□□□ 0.07
CD48-203ENST00000613788 RTN3O95197 1032 aaPredicted RBP15.5■□□□□ 0.07
CD48-203ENST00000613788 HNRNPA1P09651 372 aaKnown RBP eCLIP15.5■□□□□ 0.07
CD48-203ENST00000613788 ATF6P18850 670 aa15.5■□□□□ 0.07
CD48-203ENST00000613788 HOXA9P31269 272 aa15.5■□□□□ 0.07
CD48-203ENST00000613788 RPL34P49207 117 aaKnown RBP15.5■□□□□ 0.07
CD48-203ENST00000613788 GPR15P49685 360 aa15.5■□□□□ 0.07
CD48-203ENST00000613788 RGS7P49802 495 aa15.5■□□□□ 0.07
CD48-203ENST00000613788 GFPT1Q06210 699 aaPredicted RBP15.5■□□□□ 0.07
CD48-203ENST00000613788 TWF1Q12792 350 aa15.5■□□□□ 0.07
CD48-203ENST00000613788 KCNC3Q14003 757 aa15.5■□□□□ 0.07
CD48-203ENST00000613788 SPA17Q15506 151 aa15.5■□□□□ 0.07
CD48-203ENST00000613788 C10orf76Q5T2E6 689 aa15.5■□□□□ 0.07
CD48-203ENST00000613788 TMEM184AQ6ZMB5 413 aa15.5■□□□□ 0.07
CD48-203ENST00000613788 DENND5BQ6ZUT9 1274 aa15.5■□□□□ 0.07
CD48-203ENST00000613788 TMEM110Q86TL2 294 aa15.5■□□□□ 0.07
CD48-203ENST00000613788 ITIH5Q86UX2 942 aa15.5■□□□□ 0.07
CD48-203ENST00000613788 PHF13Q86YI8 300 aaPredicted RBP15.5■□□□□ 0.07
CD48-203ENST00000613788 DEFB123Q8N688 67 aa15.5■□□□□ 0.07
CD48-203ENST00000613788 VCPIP1Q96JH7 1222 aa15.5■□□□□ 0.07
CD48-203ENST00000613788 ISCUQ9H1K1 167 aa15.5■□□□□ 0.07
CD48-203ENST00000613788 LUC7LQ9NQ29 371 aaKnown RBP15.5■□□□□ 0.07
CD48-203ENST00000613788 DZANK1Q9NVP4 752 aa15.5■□□□□ 0.07
CD48-203ENST00000613788 ZDHHC7Q9NXF8 308 aa15.5■□□□□ 0.07
CD48-203ENST00000613788 CYTH4Q9UIA0 394 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms