RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 MXRA8Q9BRK3 442 aa11.52□□□□□ -0.56
CDH4-202ENST00000611855 SLC13A1Q9BZW2 595 aa11.52□□□□□ -0.56
CDH4-202ENST00000611855 GRIP2Q9C0E4 1043 aa11.52□□□□□ -0.56
CDH4-202ENST00000611855 ARHGEF38Q9NXL2 777 aa11.52□□□□□ -0.56
CDH4-202ENST00000611855 AGTPBP1Q9UPW5 1226 aa11.52□□□□□ -0.56
CDH4-202ENST00000611855 ZNF510Q9Y2H8 683 aa11.52□□□□□ -0.56
CDH4-202ENST00000611855 TELO2Q9Y4R8 837 aa11.52□□□□□ -0.56
CDH4-202ENST00000611855 PCDHB2Q9Y5E7 798 aa11.52□□□□□ -0.56
CDH4-202ENST00000611855 A8MXQ7 604 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 TCP10L2B9ZVM9 353 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 SPECC1L-ADORA2AF8WAN1 911 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 HLA-DRAP01903 254 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 PEX2P28328 305 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 RXRBP28702 533 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 MYBPC2Q14324 1141 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 ACAP1Q15027 740 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 SPOCD1Q6ZMY3 1216 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 CDHR3Q6ZTQ4 885 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 ARID3BQ8IVW6 561 aaPredicted RBP11.52□□□□□ -0.57
CDH4-202ENST00000611855 POU5F2Q8N7G0 328 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 GMCL1P1Q8NEA9 526 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 NCSTNQ92542 709 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 ACAP3Q96P50 834 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 AVENQ9NQS1 362 aaPredicted RBP11.52□□□□□ -0.57
CDH4-202ENST00000611855 SENP1Q9P0U3 644 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 MTO1Q9Y2Z2 717 aaKnown RBP11.52□□□□□ -0.57
CDH4-202ENST00000611855 NRAPQ86VF7 1730 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 CLRN2A0PK11 232 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 SORBS2O94875 1100 aaKnown RBP11.52□□□□□ -0.57
CDH4-202ENST00000611855 TMEM63AO94886 807 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 MAP3K6O95382 1288 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 TOP3BO95985 862 aaKnown RBP11.52□□□□□ -0.57
CDH4-202ENST00000611855 YWHAGP61981 247 aaKnown RBP eCLIP11.52□□□□□ -0.57
CDH4-202ENST00000611855 NOMO3P69849 1222 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 HPCAP84074 193 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 SLC25A3Q00325 362 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 CBX3Q13185 183 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 PTK7Q13308 1070 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 MPP3Q13368 585 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 DGKZQ13574 1117 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 EFHC2Q5JST6 749 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 TDRPQ86YL5 185 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 BANPQ8N9N5 519 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 ACTL9Q8TC94 416 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 YIPF2Q9BWQ6 316 aa11.52□□□□□ -0.57
CDH4-202ENST00000611855 QTRT2Q9H974 415 aaKnown RBP11.52□□□□□ -0.57
CDH4-202ENST00000611855 FOCADQ5VW36 1801 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 TRPA1O75762 1119 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 DLDP09622 509 aaKnown RBP11.51□□□□□ -0.57
CDH4-202ENST00000611855 PABPC4LP0CB38 370 aaKnown RBP11.51□□□□□ -0.57
CDH4-202ENST00000611855 VCPP55072 806 aaKnown RBP11.51□□□□□ -0.57
CDH4-202ENST00000611855 OTUD4Q01804 1114 aaKnown RBP11.51□□□□□ -0.57
CDH4-202ENST00000611855 ZNF252P-AS1Q0IIN9 211 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 DMP1Q13316 513 aaPredicted RBP11.51□□□□□ -0.57
CDH4-202ENST00000611855 MORF4L2Q15014 288 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 PDK3Q15120 406 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 WDR44Q5JSH3 913 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 ZBTB41Q5SVQ8 909 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 IYDQ6PHW0 289 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 PAOXQ6QHF9 649 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 HHIPL2Q6UWX4 724 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 ZCCHC23Q6ZST2 131 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 TRIM67Q6ZTA4 783 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 TMPRSS6Q8IU80 811 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 RELL1Q8IUW5 271 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 CDAN1Q8IWY9 1227 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 STKLD1Q8NE28 680 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 CPT1BQ92523 772 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 SKA1Q96BD8 255 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 TRIM56Q9BRZ2 755 aaKnown RBP11.51□□□□□ -0.57
CDH4-202ENST00000611855 ARHGEF4Q9NR80 690 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 STK32BQ9NY57 414 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 ASTN2O75129 1339 aaPredicted RBP11.51□□□□□ -0.57
CDH4-202ENST00000611855 DCAF8L1A6NGE4 600 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 BMPR2Q13873 1038 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 UBAP2LQ14157 1087 aaKnown RBP11.51□□□□□ -0.57
CDH4-202ENST00000611855 VPS72Q15906 364 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 KBTBD12Q3ZCT8 623 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 RABGAP1LQ5R372 815 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 TATDN1Q6P1N9 297 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 FAM71DQ8N9W8 422 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 FEZF2Q8TBJ5 459 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 GDPD5Q8WTR4 605 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 HSPBAP1Q96EW2 488 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 CFAP36Q96G28 342 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 IQCGQ9H095 443 aaKnown RBP11.51□□□□□ -0.57
CDH4-202ENST00000611855 APOBEC3GQ9HC16 384 aaKnown RBP11.51□□□□□ -0.57
CDH4-202ENST00000611855 DDX43Q9NXZ2 648 aaKnown RBP11.51□□□□□ -0.57
CDH4-202ENST00000611855 PCSK1NQ9UHG2 260 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 APPL1Q9UKG1 709 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 PACSIN3Q9UKS6 424 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 COQ4Q9Y3A0 265 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 IKBKGQ9Y6K9 419 aa11.51□□□□□ -0.57
CDH4-202ENST00000611855 PDLIM1O00151 329 aa11.5□□□□□ -0.57
CDH4-202ENST00000611855 DHX15O43143 795 aaKnown RBP11.5□□□□□ -0.57
CDH4-202ENST00000611855 DNAJC6O75061 913 aa11.5□□□□□ -0.57
CDH4-202ENST00000611855 CD48P09326 243 aa11.5□□□□□ -0.57
CDH4-202ENST00000611855 VCLP18206 1134 aa11.5□□□□□ -0.57
CDH4-202ENST00000611855 FAXCQ5TGI0 409 aa11.5□□□□□ -0.57
CDH4-202ENST00000611855 TDRD10Q5VZ19 366 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms